RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 TFCP2Q12800 502 aa22.09■■□□□ 1.13
RER1-206ENST00000462129 RASA3Q14644 834 aa22.09■■□□□ 1.13
RER1-206ENST00000462129 C15orf52Q6ZUT6 534 aaKnown RBP22.09■■□□□ 1.13
RER1-206ENST00000462129 PTPN18Q99952 460 aa22.09■■□□□ 1.13
RER1-206ENST00000462129 ELP3Q9H9T3 547 aa22.09■■□□□ 1.13
RER1-206ENST00000462129 A0A1B0GUL6 1792 aa22.09■■□□□ 1.13
RER1-206ENST00000462129 OTOFQ9HC10 1997 aa22.08■■□□□ 1.13
RER1-206ENST00000462129 CENPFP49454 3210 aa22.08■■□□□ 1.13
RER1-206ENST00000462129 FKBP1AP62942 108 aaKnown RBP22.08■■□□□ 1.13
RER1-206ENST00000462129 CAP1Q01518 475 aa22.08■■□□□ 1.13
RER1-206ENST00000462129 ATP2B3Q16720 1220 aa22.08■■□□□ 1.13
RER1-206ENST00000462129 VPS37DQ86XT2 251 aa22.08■■□□□ 1.13
RER1-206ENST00000462129 LPIN2Q92539 896 aa22.08■■□□□ 1.13
RER1-206ENST00000462129 OPTNQ96CV9 577 aa22.08■■□□□ 1.13
RER1-206ENST00000462129 KIAA0100Q14667 2235 aaKnown RBP22.07■■□□□ 1.12
RER1-206ENST00000462129 TESPA1A2RU30 521 aaPredicted RBP22.07■■□□□ 1.12
RER1-206ENST00000462129 CAVIN4Q5BKX8 364 aa22.07■■□□□ 1.12
RER1-206ENST00000462129 CLASRPQ8N2M8 674 aaKnown RBP22.07■■□□□ 1.12
RER1-206ENST00000462129 TMEM106CQ9BVX2 250 aa22.07■■□□□ 1.12
RER1-206ENST00000462129 LRRCC1Q9C099 1032 aa22.07■■□□□ 1.12
RER1-206ENST00000462129 BCL11AQ9H165 835 aa22.07■■□□□ 1.12
RER1-206ENST00000462129 DCTPP1Q9H773 170 aa22.07■■□□□ 1.12
RER1-206ENST00000462129 BRCA2P51587 3418 aa22.06■■□□□ 1.12
RER1-206ENST00000462129 GORABQ5T7V8 394 aa22.06■■□□□ 1.12
RER1-206ENST00000462129 VGLL2Q8N8G2 317 aa22.06■■□□□ 1.12
RER1-206ENST00000462129 RHPN1Q8TCX5 695 aa22.06■■□□□ 1.12
RER1-206ENST00000462129 TNFAIP1Q13829 316 aa22.05■■□□□ 1.12
RER1-206ENST00000462129 ZNF333Q96JL9 665 aa22.05■■□□□ 1.12
RER1-206ENST00000462129 CCDC136Q96JN2 1154 aa22.05■■□□□ 1.12
RER1-206ENST00000462129 NEUROD6Q96NK8 337 aa22.05■■□□□ 1.12
RER1-206ENST00000462129 GPR108Q9NPR9 543 aa22.05■■□□□ 1.12
RER1-206ENST00000462129 FXR1P51114 621 aaKnown RBP eCLIP22.04■■□□□ 1.12
RER1-206ENST00000462129 PTCH2Q9Y6C5 1203 aa22.04■■□□□ 1.12
RER1-206ENST00000462129 A0A1B0GUL7 405 aa22.03■■□□□ 1.12
RER1-206ENST00000462129 TAF1CQ15572 869 aaPredicted RBP22.03■■□□□ 1.12
RER1-206ENST00000462129 SPDYE2Q495Y8 402 aa22.03■■□□□ 1.12
RER1-206ENST00000462129 SLC9C1Q4G0N8 1177 aa22.03■■□□□ 1.12
RER1-206ENST00000462129 CNKSR2Q8WXI2 1034 aa22.03■■□□□ 1.12
RER1-206ENST00000462129 BRI3BPQ8WY22 251 aa22.03■■□□□ 1.12
RER1-206ENST00000462129 MS4A4AQ96JQ5 239 aa22.03■■□□□ 1.12
RER1-206ENST00000462129 ZNF70Q9UC06 446 aaPredicted RBP22.03■■□□□ 1.12
RER1-206ENST00000462129 CCL15-CCL14A0A0B4J2E2 113 aa22.02■■□□□ 1.12
RER1-206ENST00000462129 FRAT2O75474 233 aaPredicted RBP22.02■■□□□ 1.12
RER1-206ENST00000462129 IFIT2P09913 472 aaKnown RBP22.02■■□□□ 1.12
RER1-206ENST00000462129 CCL15Q16663 113 aa22.02■■□□□ 1.12
RER1-206ENST00000462129 TNNI3KQ59H18 835 aa22.02■■□□□ 1.12
RER1-206ENST00000462129 CDAN1Q8IWY9 1227 aa22.02■■□□□ 1.12
RER1-206ENST00000462129 TDRD3Q9H7E2 651 aaKnown RBP22.02■■□□□ 1.12
RER1-206ENST00000462129 ZFYVE28Q9HCC9 887 aa22.02■■□□□ 1.12
RER1-206ENST00000462129 IL1RAPL2Q9NP60 686 aa22.02■■□□□ 1.12
RER1-206ENST00000462129 GNL3LQ9NVN8 582 aaKnown RBP22.02■■□□□ 1.12
RER1-206ENST00000462129 FPGT-TNNI3KV9GXZ4 949 aa22.02■■□□□ 1.12
RER1-206ENST00000462129 FGFR2P21802 821 aa22.01■■□□□ 1.11
RER1-206ENST00000462129 ARHGEF6Q15052 776 aa22.01■■□□□ 1.11
RER1-206ENST00000462129 SLC4A8Q2Y0W8 1093 aa22.01■■□□□ 1.11
RER1-206ENST00000462129 MFSD14BQ5SR56 506 aa22.01■■□□□ 1.11
RER1-206ENST00000462129 NBPF11Q86T75 865 aa22.01■■□□□ 1.11
RER1-206ENST00000462129 AACSQ86V21 672 aa22.01■■□□□ 1.11
RER1-206ENST00000462129 TTF2Q9UNY4 1162 aaKnown RBP22.01■■□□□ 1.11
RER1-206ENST00000462129 TCP10L2B9ZVM9 353 aa22■■□□□ 1.11
RER1-206ENST00000462129 MYCP01106 439 aaPredicted RBP22■■□□□ 1.11
RER1-206ENST00000462129 HIBADHP31937 336 aaKnown RBP22■■□□□ 1.11
RER1-206ENST00000462129 TIMM10P62072 90 aa22■■□□□ 1.11
RER1-206ENST00000462129 VGLL4Q14135 290 aa22■■□□□ 1.11
RER1-206ENST00000462129 ANKRD45Q5TZF3 282 aa22■■□□□ 1.11
RER1-206ENST00000462129 PPP1R3FQ6ZSY5 799 aaPredicted RBP22■■□□□ 1.11
RER1-206ENST00000462129 SERPINA10Q9UK55 444 aa22■■□□□ 1.11
RER1-206ENST00000462129 FAM205AQ6ZU69 1335 aa22■■□□□ 1.11
RER1-206ENST00000462129 IGHDP01880 384 aa21.99■■□□□ 1.11
RER1-206ENST00000462129 GTF2A2P52657 109 aa21.99■■□□□ 1.11
RER1-206ENST00000462129 CCDC158Q5M9N0 1113 aa21.99■■□□□ 1.11
RER1-206ENST00000462129 OTUD5Q96G74 571 aa21.99■■□□□ 1.11
RER1-206ENST00000462129 GPATCH3Q96I76 525 aa21.99■■□□□ 1.11
RER1-206ENST00000462129 TEPSINQ96N21 525 aa21.99■■□□□ 1.11
RER1-206ENST00000462129 TMEM39BQ9GZU3 492 aa21.99■■□□□ 1.11
RER1-206ENST00000462129 PPP4R2Q9NY27 417 aa21.99■■□□□ 1.11
RER1-206ENST00000462129 COLQQ9Y215 455 aaPredicted RBP21.99■■□□□ 1.11
RER1-206ENST00000462129 ARAP2Q8WZ64 1704 aa21.98■■□□□ 1.11
RER1-206ENST00000462129 GYG1P46976 350 aa21.98■■□□□ 1.11
RER1-206ENST00000462129 MAP3K9P80192 1104 aa21.98■■□□□ 1.11
RER1-206ENST00000462129 FAM43AQ8N2R8 423 aa21.98■■□□□ 1.11
RER1-206ENST00000462129 XAGE2Q96GT9 111 aa21.98■■□□□ 1.11
RER1-206ENST00000462129 CSADQ9Y600 493 aa21.98■■□□□ 1.11
RER1-206ENST00000462129 TNNI2P48788 182 aa21.97■■□□□ 1.11
RER1-206ENST00000462129 TTC39AQ5SRH9 613 aa21.97■■□□□ 1.11
RER1-206ENST00000462129 B4GALNT3Q6L9W6 998 aa21.97■■□□□ 1.11
RER1-206ENST00000462129 SMC5Q8IY18 1101 aa21.97■■□□□ 1.11
RER1-206ENST00000462129 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.97■■□□□ 1.11
RER1-206ENST00000462129 SMARCA5O60264 1052 aaPredicted RBP21.96■■□□□ 1.11
RER1-206ENST00000462129 CRKP46108 304 aa21.96■■□□□ 1.11
RER1-206ENST00000462129 CENPQQ7L2Z9 268 aaPredicted RBP21.96■■□□□ 1.11
RER1-206ENST00000462129 TDRD7Q8NHU6 1098 aaKnown RBP21.96■■□□□ 1.11
RER1-206ENST00000462129 SH3TC2Q8TF17 1288 aa21.96■■□□□ 1.11
RER1-206ENST00000462129 CCDC8Q9H0W5 538 aaPredicted RBP21.96■■□□□ 1.11
RER1-206ENST00000462129 WDHD1O75717 1129 aaPredicted RBP21.95■■□□□ 1.1
RER1-206ENST00000462129 EAF2Q96CJ1 260 aaPredicted RBP21.95■■□□□ 1.1
RER1-206ENST00000462129 FAM84BQ96KN1 310 aaPredicted RBP21.95■■□□□ 1.1
RER1-206ENST00000462129 ZSWIM8A7E2V4 1837 aa21.94■■□□□ 1.1
RER1-206ENST00000462129 UQCRFS1P1P0C7P4 283 aa21.94■■□□□ 1.1
RER1-206ENST00000462129 ADORA1P30542 326 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms