RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 KMT5BQ4FZB7 885 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 LDLRAD1Q5T700 205 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 STRIP1Q5VSL9 837 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 LRSAM1Q6UWE0 723 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 ARMC5Q96C12 935 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 SPTLC3Q9NUV7 552 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 USP25Q9UHP3 1055 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 POLR3GO15318 223 aaPredicted RBP6.92□□□□□ -1.3
CLK1-207ENST00000461981 TMPOP42166 694 aaKnown RBP6.92□□□□□ -1.3
CLK1-207ENST00000461981 RBM5P52756 815 aaKnown RBP eCLIP6.92□□□□□ -1.3
CLK1-207ENST00000461981 GNAI1P63096 354 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 BMS1Q14692 1282 aaKnown RBP6.92□□□□□ -1.3
CLK1-207ENST00000461981 KIF4BQ2VIQ3 1234 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 TTLL7Q6ZT98 887 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 ARMC9Q7Z3E5 817 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 ERO1AQ96HE7 468 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 RNF186Q9NXI6 227 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 GGA1Q9UJY5 639 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 SUGT1Q9Y2Z0 365 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 LRRFIP2Q9Y608 721 aaKnown RBP6.92□□□□□ -1.3
CLK1-207ENST00000461981 PPP1R12AO14974 1030 aaPredicted RBP6.92□□□□□ -1.3
CLK1-207ENST00000461981 MAP4K4O95819 1239 aaPredicted RBP6.92□□□□□ -1.3
CLK1-207ENST00000461981 DGKZQ13574 1117 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 WASHC4Q2M389 1173 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 SULF1Q8IWU6 871 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 HDAC9Q9UKV0 1011 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 MRVI1Q9Y6F6 885 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 RPS8P62241 208 aaKnown RBP6.91□□□□□ -1.3
CLK1-207ENST00000461981 HTRA3P83110 453 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 AOC3Q16853 763 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 FKBP1CQ5VVH2 108 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 TTC19Q6DKK2 380 aaPredicted RBP6.91□□□□□ -1.3
CLK1-207ENST00000461981 TTLL5Q6EMB2 1281 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 MICALL2Q8IY33 904 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 ANKRD20A12PQ8NF67 263 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 TBC1D16Q8TBP0 767 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 BSDC1Q9NW68 430 aaPredicted RBP6.91□□□□□ -1.3
CLK1-207ENST00000461981 TMEM63CQ9P1W3 806 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 PYCARDQ9ULZ3 195 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 GJA3Q9Y6H8 435 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 ECE2O60344 883 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 OTUD7BQ6GQQ9 843 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 MCM10Q7L590 875 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 GPT2Q8TD30 523 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 CDCA5Q96FF9 252 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 C16orf45Q96MC5 204 aaPredicted RBP6.91□□□□□ -1.3
CLK1-207ENST00000461981 RRP15Q9Y3B9 282 aaKnown RBP6.91□□□□□ -1.3
CLK1-207ENST00000461981 SCN9AQ15858 1988 aa6.91□□□□□ -1.3
CLK1-207ENST00000461981 USP17L3A6NCW0 530 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 USP17L4A6NCW7 530 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 YDJCA8MPS7 323 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 H0YHG0 523 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 FKTNO75072 461 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 HIRAP54198 1017 aaPredicted RBP6.9□□□□□ -1.3
CLK1-207ENST00000461981 SARNPP82979 210 aaKnown RBP6.9□□□□□ -1.3
CLK1-207ENST00000461981 GOLGA2Q08379 1002 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 ZSCAN26Q16670 478 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 CYP4F22Q6NT55 531 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 ANKRD13DQ6ZTN6 518 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 USP17L1Q7RTZ2 530 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 OTUD6BQ8N6M0 293 aa6.9□□□□□ -1.3
CLK1-207ENST00000461981 COL2A1P02458 1487 aaPredicted RBP6.9□□□□□ -1.3
CLK1-207ENST00000461981 CD2BP2O95400 341 aaKnown RBP6.9□□□□□ -1.31
CLK1-207ENST00000461981 HUNKP57058 714 aa6.9□□□□□ -1.31
CLK1-207ENST00000461981 KIF23Q02241 960 aaPredicted RBP6.9□□□□□ -1.31
CLK1-207ENST00000461981 GPR153Q6NV75 609 aa6.9□□□□□ -1.31
CLK1-207ENST00000461981 SRLQ86TD4 932 aa6.9□□□□□ -1.31
CLK1-207ENST00000461981 ZNF397Q8NF99 534 aaPredicted RBP6.9□□□□□ -1.31
CLK1-207ENST00000461981 METTL22Q9BUU2 404 aaPredicted RBP6.9□□□□□ -1.31
CLK1-207ENST00000461981 LMBRD1Q9NUN5 540 aa6.9□□□□□ -1.31
CLK1-207ENST00000461981 NSFL1CQ9UNZ2 370 aaKnown RBP6.9□□□□□ -1.31
CLK1-207ENST00000461981 FAM205AQ6ZU69 1335 aa6.9□□□□□ -1.31
CLK1-207ENST00000461981 IPO8O15397 1037 aaKnown RBP6.9□□□□□ -1.31
CLK1-207ENST00000461981 MAP9Q49MG5 647 aa6.9□□□□□ -1.31
CLK1-207ENST00000461981 FBXO38Q6PIJ6 1188 aa6.9□□□□□ -1.31
CLK1-207ENST00000461981 KRT26Q7Z3Y9 468 aa6.9□□□□□ -1.31
CLK1-207ENST00000461981 TXLNBQ8N3L3 684 aa6.9□□□□□ -1.31
CLK1-207ENST00000461981 ZC3H12CQ9C0D7 883 aaKnown RBP6.9□□□□□ -1.31
CLK1-207ENST00000461981 RBM28Q9NW13 759 aaKnown RBP6.9□□□□□ -1.31
CLK1-207ENST00000461981 TRMT112Q9UI30 125 aaKnown RBP6.9□□□□□ -1.31
CLK1-207ENST00000461981 AK9Q5TCS8 1911 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 PSMD14O00487 310 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 SCP2P22307 547 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 MUM1L1Q5H9M0 696 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 CREBRFQ8IUR6 639 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 XAGE3Q8WTP9 111 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 SLC24A3Q9HC58 644 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 PRAMEF22A3QJZ6 481 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 BCAR3O75815 825 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 ADCY5O95622 1261 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 SETQ01105 290 aaPredicted RBP6.89□□□□□ -1.31
CLK1-207ENST00000461981 COPS6Q7L5N1 327 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 CCDC112Q8NEF3 446 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 TRPM4Q8TD43 1214 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 CWC25Q9NXE8 425 aaPredicted RBP6.89□□□□□ -1.31
CLK1-207ENST00000461981 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
CLK1-207ENST00000461981 GSCP56915 257 aaPredicted RBP6.88□□□□□ -1.31
CLK1-207ENST00000461981 GPSM2P81274 684 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 CCDC30Q5VVM6 783 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms