RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 RNF186Q9NXI6 227 aa10.96□□□□□ -0.65
HDAC9-220ENST00000461409 PTPRCP08575 1304 aa10.95□□□□□ -0.66
HDAC9-220ENST00000461409 CCDC85CA6NKD9 419 aa10.95□□□□□ -0.66
HDAC9-220ENST00000461409 E9PSI1 815 aa10.95□□□□□ -0.66
HDAC9-220ENST00000461409 UBE2Q2LH0YL09 131 aa10.95□□□□□ -0.66
HDAC9-220ENST00000461409 SNAP23O00161 211 aa10.95□□□□□ -0.66
HDAC9-220ENST00000461409 MYO1BO43795 1136 aa10.95□□□□□ -0.66
HDAC9-220ENST00000461409 DGKZQ13574 1117 aa10.95□□□□□ -0.66
HDAC9-220ENST00000461409 ARMC9Q7Z3E5 817 aa10.95□□□□□ -0.66
HDAC9-220ENST00000461409 MTMR14Q8NCE2 650 aa10.95□□□□□ -0.66
HDAC9-220ENST00000461409 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-220ENST00000461409 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
HDAC9-220ENST00000461409 UTYO14607 1347 aa10.94□□□□□ -0.66
HDAC9-220ENST00000461409 ZNF646O15015 1829 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-220ENST00000461409 PLIN1O60240 522 aa10.94□□□□□ -0.66
HDAC9-220ENST00000461409 UBE4AQ14139 1066 aa10.94□□□□□ -0.66
HDAC9-220ENST00000461409 PROX2Q3B8N5 592 aa10.94□□□□□ -0.66
HDAC9-220ENST00000461409 PRAMEF18Q5VWM3 479 aa10.94□□□□□ -0.66
HDAC9-220ENST00000461409 MOB2Q70IA6 237 aa10.94□□□□□ -0.66
HDAC9-220ENST00000461409 CERS5Q8N5B7 392 aa10.94□□□□□ -0.66
HDAC9-220ENST00000461409 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-220ENST00000461409 PPP2R3BQ9Y5P8 575 aa10.94□□□□□ -0.66
HDAC9-220ENST00000461409 MROH5Q6ZUA9 1318 aa10.93□□□□□ -0.66
HDAC9-220ENST00000461409 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
HDAC9-220ENST00000461409 TSR1Q2NL82 804 aaKnown RBP10.93□□□□□ -0.66
HDAC9-220ENST00000461409 SUCLG2Q96I99 432 aa10.93□□□□□ -0.66
HDAC9-220ENST00000461409 DEFB129Q9H1M3 183 aa10.93□□□□□ -0.66
HDAC9-220ENST00000461409 FAM205AQ6ZU69 1335 aa10.92□□□□□ -0.66
HDAC9-220ENST00000461409 F8W031 263 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-220ENST00000461409 MAP3K7O43318 606 aa10.92□□□□□ -0.66
HDAC9-220ENST00000461409 NBPF7P0C2Y1 421 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-220ENST00000461409 OSBPP22059 807 aa10.92□□□□□ -0.66
HDAC9-220ENST00000461409 HIBADHP31937 336 aaKnown RBP10.92□□□□□ -0.66
HDAC9-220ENST00000461409 SREBF2Q12772 1141 aa10.92□□□□□ -0.66
HDAC9-220ENST00000461409 RABL6Q3YEC7 729 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-220ENST00000461409 SUPT20HL1Q3ZLR7 823 aa10.92□□□□□ -0.66
HDAC9-220ENST00000461409 CFAP100Q494V2 611 aa10.92□□□□□ -0.66
HDAC9-220ENST00000461409 MRPL50Q8N5N7 158 aaKnown RBP10.92□□□□□ -0.66
HDAC9-220ENST00000461409 BICC1Q9H694 974 aaKnown RBP10.92□□□□□ -0.66
HDAC9-220ENST00000461409 CASP8AP2Q9UKL3 1982 aa10.92□□□□□ -0.66
HDAC9-220ENST00000461409 A0A1B0GUL6 1792 aa10.91□□□□□ -0.66
HDAC9-220ENST00000461409 UNCXA6NJT0 531 aa10.91□□□□□ -0.66
HDAC9-220ENST00000461409 PPP1R12BO60237 982 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-220ENST00000461409 RBM5P52756 815 aaKnown RBP eCLIP10.91□□□□□ -0.66
HDAC9-220ENST00000461409 TNFAIP1Q13829 316 aa10.91□□□□□ -0.66
HDAC9-220ENST00000461409 MFSD14BQ5SR56 506 aa10.91□□□□□ -0.66
HDAC9-220ENST00000461409 LDLRAD1Q5T700 205 aa10.91□□□□□ -0.66
HDAC9-220ENST00000461409 CTU1Q7Z7A3 348 aaKnown RBP10.91□□□□□ -0.66
HDAC9-220ENST00000461409 VPS37DQ86XT2 251 aa10.91□□□□□ -0.66
HDAC9-220ENST00000461409 TDRD7Q8NHU6 1098 aaKnown RBP10.91□□□□□ -0.66
HDAC9-220ENST00000461409 KAZALD1Q96I82 304 aa10.91□□□□□ -0.66
HDAC9-220ENST00000461409 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
HDAC9-220ENST00000461409 ANGEL1Q9UNK9 670 aaKnown RBP10.91□□□□□ -0.66
HDAC9-220ENST00000461409 AKAP11Q9UKA4 1901 aa10.91□□□□□ -0.66
HDAC9-220ENST00000461409 CLRN2A0PK11 232 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 GYG1P46976 350 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 TM4SF4P48230 202 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 RGS19P49795 217 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 MLLT1Q03111 559 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-220ENST00000461409 PTPN12Q05209 780 aaKnown RBP10.9□□□□□ -0.66
HDAC9-220ENST00000461409 PRKG1Q13976 671 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 ALDH1L2Q3SY69 923 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 CAVIN4Q5BKX8 364 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 NOM1Q5C9Z4 860 aaKnown RBP10.9□□□□□ -0.66
HDAC9-220ENST00000461409 METTL24Q5JXM2 366 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 SSH1Q8WYL5 1049 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 SLC10A4Q96EP9 437 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 FAM84BQ96KN1 310 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-220ENST00000461409 VEZTQ9HBM0 779 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 SERPINA10Q9UK55 444 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 JAG2Q9Y219 1238 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 RIPOR2Q9Y4F9 1068 aa10.9□□□□□ -0.66
HDAC9-220ENST00000461409 MANSC4A6NHS7 340 aaPredicted RBP10.89□□□□□ -0.67
HDAC9-220ENST00000461409 FRAT2O75474 233 aaPredicted RBP10.89□□□□□ -0.67
HDAC9-220ENST00000461409 ALDH1A1P00352 501 aa10.89□□□□□ -0.67
HDAC9-220ENST00000461409 INHBEP58166 350 aa10.89□□□□□ -0.67
HDAC9-220ENST00000461409 SLFN5Q08AF3 891 aa10.89□□□□□ -0.67
HDAC9-220ENST00000461409 PKN2Q16513 984 aaKnown RBP10.89□□□□□ -0.67
HDAC9-220ENST00000461409 MAP3K11Q16584 847 aa10.89□□□□□ -0.67
HDAC9-220ENST00000461409 SPRYD7Q5W111 196 aa10.89□□□□□ -0.67
HDAC9-220ENST00000461409 ANKRD44Q8N8A2 993 aa10.89□□□□□ -0.67
HDAC9-220ENST00000461409 TBC1D22AQ8WUA7 517 aa10.89□□□□□ -0.67
HDAC9-220ENST00000461409 PRMT6Q96LA8 375 aaPredicted RBP10.89□□□□□ -0.67
HDAC9-220ENST00000461409 PUS3Q9BZE2 481 aaKnown RBP10.89□□□□□ -0.67
HDAC9-220ENST00000461409 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
HDAC9-220ENST00000461409 TTF2Q9UNY4 1162 aaKnown RBP10.89□□□□□ -0.67
HDAC9-220ENST00000461409 KIF16BQ96L93 1317 aa10.88□□□□□ -0.67
HDAC9-220ENST00000461409 PDE8BO95263 885 aa10.88□□□□□ -0.67
HDAC9-220ENST00000461409 CT47B1P0C2W7 299 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-220ENST00000461409 ZBTB48P10074 688 aaPredicted RBP10.88□□□□□ -0.67
HDAC9-220ENST00000461409 IREB2P48200 963 aaKnown RBP10.88□□□□□ -0.67
HDAC9-220ENST00000461409 RASA3Q14644 834 aa10.88□□□□□ -0.67
HDAC9-220ENST00000461409 PUM3Q15397 648 aaKnown RBP10.88□□□□□ -0.67
HDAC9-220ENST00000461409 FBXO33Q7Z6M2 555 aa10.88□□□□□ -0.67
HDAC9-220ENST00000461409 CFHR5Q9BXR6 569 aa10.88□□□□□ -0.67
HDAC9-220ENST00000461409 USP44Q9H0E7 712 aa10.88□□□□□ -0.67
HDAC9-220ENST00000461409 SMC4Q9NTJ3 1288 aa10.88□□□□□ -0.67
HDAC9-220ENST00000461409 PCDHAC2Q9Y5I4 1007 aa10.88□□□□□ -0.67
HDAC9-220ENST00000461409 SSC5DA1L4H1 1573 aa10.87□□□□□ -0.67
HDAC9-220ENST00000461409 TRIM6-TRIM34B2RNG4 842 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms