RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 WNK4Q96J92 1243 aa18.92■□□□□ 0.62
VARS-219ENST00000461328 ABCF2Q9UG63 623 aa18.92■□□□□ 0.62
VARS-219ENST00000461328 ZBTB48P10074 688 aaPredicted RBP18.91■□□□□ 0.62
VARS-219ENST00000461328 TNNI3KQ59H18 835 aa18.91■□□□□ 0.62
VARS-219ENST00000461328 SPTY2D1Q68D10 685 aaPredicted RBP18.91■□□□□ 0.62
VARS-219ENST00000461328 CDC42EP5Q6NZY7 148 aa18.91■□□□□ 0.62
VARS-219ENST00000461328 ZBTB40Q9NUA8 1239 aa18.91■□□□□ 0.62
VARS-219ENST00000461328 EXOC6BQ9Y2D4 811 aa18.91■□□□□ 0.62
VARS-219ENST00000461328 NOP58Q9Y2X3 529 aaKnown RBP18.91■□□□□ 0.62
VARS-219ENST00000461328 FPGT-TNNI3KV9GXZ4 949 aa18.91■□□□□ 0.62
VARS-219ENST00000461328 CASP8AP2Q9UKL3 1982 aa18.91■□□□□ 0.62
VARS-219ENST00000461328 MANSC4A6NHS7 340 aaPredicted RBP18.9■□□□□ 0.62
VARS-219ENST00000461328 TTC39AQ5SRH9 613 aa18.9■□□□□ 0.62
VARS-219ENST00000461328 ERC1Q8IUD2 1116 aa18.9■□□□□ 0.62
VARS-219ENST00000461328 HOOK2Q96ED9 719 aa18.9■□□□□ 0.62
VARS-219ENST00000461328 ABHD8Q96I13 439 aa18.9■□□□□ 0.62
VARS-219ENST00000461328 ELP3Q9H9T3 547 aa18.9■□□□□ 0.62
VARS-219ENST00000461328 GPR108Q9NPR9 543 aa18.9■□□□□ 0.62
VARS-219ENST00000461328 USP40Q9NVE5 1235 aa18.9■□□□□ 0.62
VARS-219ENST00000461328 HSP90AB4PQ58FF6 505 aa18.89■□□□□ 0.61
VARS-219ENST00000461328 SLF2Q8IX21 1173 aa18.89■□□□□ 0.61
VARS-219ENST00000461328 RPAP2Q8IXW5 612 aaPredicted RBP18.89■□□□□ 0.61
VARS-219ENST00000461328 SPATA5Q8NB90 893 aa18.89■□□□□ 0.61
VARS-219ENST00000461328 HMG20BQ9P0W2 317 aa18.89■□□□□ 0.61
VARS-219ENST00000461328 RPAP1Q9BWH6 1393 aaPredicted RBP18.89■□□□□ 0.61
VARS-219ENST00000461328 APBB1O00213 710 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 TBC1D8O95759 1140 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 UQCRFS1P1P0C7P4 283 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 ARID4AP29374 1257 aaPredicted RBP18.88■□□□□ 0.61
VARS-219ENST00000461328 INHBEP58166 350 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 MAP3K9P80192 1104 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 TCP10Q12799 353 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 DGKZQ13574 1117 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 CCDC158Q5M9N0 1113 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 ERICH6Q7L0X2 663 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 FAM151AQ8WW52 585 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 DBNDD2Q9BQY9 259 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 CSADQ9Y600 493 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 OTOFQ9HC10 1997 aa18.88■□□□□ 0.61
VARS-219ENST00000461328 GAKO14976 1311 aa18.87■□□□□ 0.61
VARS-219ENST00000461328 VGLL4Q14135 290 aa18.87■□□□□ 0.61
VARS-219ENST00000461328 DCAF15Q66K64 600 aa18.87■□□□□ 0.61
VARS-219ENST00000461328 PI16Q6UXB8 463 aa18.87■□□□□ 0.61
VARS-219ENST00000461328 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.87■□□□□ 0.61
VARS-219ENST00000461328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.87■□□□□ 0.61
VARS-219ENST00000461328 OPTNQ96CV9 577 aa18.87■□□□□ 0.61
VARS-219ENST00000461328 MCOLN1Q9GZU1 580 aa18.87■□□□□ 0.61
VARS-219ENST00000461328 BCL11AQ9H165 835 aa18.87■□□□□ 0.61
VARS-219ENST00000461328 ALDH1A1P00352 501 aa18.86■□□□□ 0.61
VARS-219ENST00000461328 GJA5P36382 358 aa18.86■□□□□ 0.61
VARS-219ENST00000461328 RRP1P56182 461 aaKnown RBP18.86■□□□□ 0.61
VARS-219ENST00000461328 NFIAQ12857 509 aa18.86■□□□□ 0.61
VARS-219ENST00000461328 IFNL1Q8IU54 200 aa18.86■□□□□ 0.61
VARS-219ENST00000461328 WRNIP1Q96S55 665 aa18.86■□□□□ 0.61
VARS-219ENST00000461328 MYH2Q9UKX2 1941 aa18.85■□□□□ 0.61
VARS-219ENST00000461328 MCAMP43121 646 aa18.85■□□□□ 0.61
VARS-219ENST00000461328 MECOMQ03112 1051 aa18.85■□□□□ 0.61
VARS-219ENST00000461328 TBC1D9Q6ZT07 1266 aa18.85■□□□□ 0.61
VARS-219ENST00000461328 AACSQ86V21 672 aa18.85■□□□□ 0.61
VARS-219ENST00000461328 FAM163AQ96GL9 167 aaPredicted RBP18.85■□□□□ 0.61
VARS-219ENST00000461328 CCDC8Q9H0W5 538 aaPredicted RBP18.85■□□□□ 0.61
VARS-219ENST00000461328 FAM198AQ9UFP1 575 aa18.85■□□□□ 0.61
VARS-219ENST00000461328 MROH7-TTC4A0A0A0MT08 1334 aa18.84■□□□□ 0.61
VARS-219ENST00000461328 BTDP43251 543 aa18.84■□□□□ 0.61
VARS-219ENST00000461328 GSTO1P78417 241 aa18.84■□□□□ 0.61
VARS-219ENST00000461328 MIGA2Q7L4E1 593 aa18.84■□□□□ 0.61
VARS-219ENST00000461328 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
VARS-219ENST00000461328 ZNF341Q9BYN7 854 aa18.84■□□□□ 0.61
VARS-219ENST00000461328 IL1RAPL2Q9NP60 686 aa18.84■□□□□ 0.61
VARS-219ENST00000461328 SNRKQ9NRH2 765 aa18.84■□□□□ 0.61
VARS-219ENST00000461328 TLR7Q9NYK1 1049 aaKnown RBP18.84■□□□□ 0.61
VARS-219ENST00000461328 RAI14Q9P0K7 980 aa18.84■□□□□ 0.61
VARS-219ENST00000461328 DBNLQ9UJU6 430 aaKnown RBP18.84■□□□□ 0.61
VARS-219ENST00000461328 LDHCP07864 332 aa18.83■□□□□ 0.6
VARS-219ENST00000461328 RGS3P49796 1198 aa18.83■□□□□ 0.6
VARS-219ENST00000461328 OTUD7BQ6GQQ9 843 aa18.83■□□□□ 0.6
VARS-219ENST00000461328 SIRT2Q8IXJ6 389 aa18.83■□□□□ 0.6
VARS-219ENST00000461328 RHPN1Q8TCX5 695 aa18.83■□□□□ 0.6
VARS-219ENST00000461328 ZNF296Q8WUU4 475 aaPredicted RBP18.83■□□□□ 0.6
VARS-219ENST00000461328 ZKSCAN4Q969J2 545 aaPredicted RBP18.83■□□□□ 0.6
VARS-219ENST00000461328 EAF2Q96CJ1 260 aaPredicted RBP18.83■□□□□ 0.6
VARS-219ENST00000461328 KIF1BPQ96EK5 621 aa18.83■□□□□ 0.6
VARS-219ENST00000461328 OTUD5Q96G74 571 aa18.83■□□□□ 0.6
VARS-219ENST00000461328 LRP2BPQ9P2M1 347 aa18.83■□□□□ 0.6
VARS-219ENST00000461328 SPDYE5A6NIY4 337 aa18.82■□□□□ 0.6
VARS-219ENST00000461328 CCDC85CA6NKD9 419 aa18.82■□□□□ 0.6
VARS-219ENST00000461328 GPR25O00155 361 aa18.82■□□□□ 0.6
VARS-219ENST00000461328 IGF2BP3O00425 579 aaKnown RBP eCLIP18.82■□□□□ 0.6
VARS-219ENST00000461328 ENTPD3O75355 529 aa18.82■□□□□ 0.6
VARS-219ENST00000461328 CTU1Q7Z7A3 348 aaKnown RBP18.82■□□□□ 0.6
VARS-219ENST00000461328 CLASRPQ8N2M8 674 aaKnown RBP18.82■□□□□ 0.6
VARS-219ENST00000461328 CFHR5Q9BXR6 569 aa18.82■□□□□ 0.6
VARS-219ENST00000461328 IDI2Q9BXS1 227 aa18.82■□□□□ 0.6
VARS-219ENST00000461328 SNCAIPQ9Y6H5 919 aa18.82■□□□□ 0.6
VARS-219ENST00000461328 LAMB1P07942 1786 aa18.81■□□□□ 0.6
VARS-219ENST00000461328 GPR75-ASB3A0A0A6YYF3 556 aa18.81■□□□□ 0.6
VARS-219ENST00000461328 RAB11FIP3O75154 756 aa18.81■□□□□ 0.6
VARS-219ENST00000461328 NOM1Q5C9Z4 860 aaKnown RBP18.81■□□□□ 0.6
VARS-219ENST00000461328 ERO1BQ86YB8 467 aa18.81■□□□□ 0.6
VARS-219ENST00000461328 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms