RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 FKBP4Q02790 459 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC9-219ENST00000461159 SCARF1Q14162 830 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 TMEM87AQ8NBN3 555 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 TBC1D22AQ8WUA7 517 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 TTC41PQ6P2S7 1318 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 GOLGA6L6A8MZA4 724 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 MMP10P09238 476 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 IGHMBP2P38935 993 aaKnown RBP9.87□□□□□ -0.83
HDAC9-219ENST00000461159 GPATCH3Q96I76 525 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 NYXQ9GZU5 481 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 WWC3Q9ULE0 1092 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 GOLGA6CA6NDK9 693 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 GOLGA6BA6NDN3 693 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 H0YHG0 523 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 GADD45BO75293 160 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-219ENST00000461159 PDE8BO95263 885 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 ADCY5O95622 1261 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 GOLGA6DP0CG33 693 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 PAX7P23759 505 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 SARNPP82979 210 aaKnown RBP9.87□□□□□ -0.83
HDAC9-219ENST00000461159 CHRNDQ07001 517 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 ERCC4Q92889 916 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-219ENST00000461159 KDM4CQ9H3R0 1056 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 GOLGA6AQ9NYA3 693 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 USP25Q9UHP3 1055 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 RIC1Q4ADV7 1423 aa9.87□□□□□ -0.83
HDAC9-219ENST00000461159 POLRMTO00411 1230 aaKnown RBP9.86□□□□□ -0.83
HDAC9-219ENST00000461159 CIAO1O76071 339 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 TM4SF1P30408 202 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 CCT2P78371 535 aaKnown RBP9.86□□□□□ -0.83
HDAC9-219ENST00000461159 SLC15A2Q16348 729 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 ANKRD18AQ8IVF6 992 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 ANKRD7Q92527 254 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 FAM227BQ96M60 508 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 ATP6V1DQ9Y5K8 247 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 SCN7AQ01118 1682 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 CNTROBQ8N137 903 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 VGLL2Q8N8G2 317 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 GPR101Q96P66 508 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-219ENST00000461159 FSD1Q9BTV5 496 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 GDPD2Q9HCC8 539 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 JRKLQ9Y4A0 524 aa9.86□□□□□ -0.83
HDAC9-219ENST00000461159 KLRK1P26718 216 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 PHKA1P46020 1223 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 BAG6P46379 1132 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 UBE2HP62256 183 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 SF3B3Q15393 1217 aaKnown RBP9.85□□□□□ -0.83
HDAC9-219ENST00000461159 OLFM4Q6UX06 510 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 SEC62Q99442 399 aaKnown RBP9.85□□□□□ -0.83
HDAC9-219ENST00000461159 SPTLC3Q9NUV7 552 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 ZNF609O15014 1411 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 IFIT1P09914 478 aaKnown RBP9.85□□□□□ -0.83
HDAC9-219ENST00000461159 TNNT1P13805 278 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 ATP5JP18859 108 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 CD151P48509 253 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 BCAMP50895 628 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 RPS8P62241 208 aaKnown RBP9.85□□□□□ -0.83
HDAC9-219ENST00000461159 CHAF1AQ13111 956 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-219ENST00000461159 SLC10A5Q5PT55 438 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 UPF3BQ9BZI7 483 aaKnown RBP9.85□□□□□ -0.83
HDAC9-219ENST00000461159 SPEF2Q9C093 1822 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
HDAC9-219ENST00000461159 JAG2Q9Y219 1238 aa9.85□□□□□ -0.83
HDAC9-219ENST00000461159 ATP2B1P20020 1258 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 MAP9Q49MG5 647 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 TTC39AQ5SRH9 613 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 GOLGA6L1Q8N7Z2 621 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 PIK3R5Q8WYR1 880 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 CDC5LQ99459 802 aaKnown RBP9.84□□□□□ -0.83
HDAC9-219ENST00000461159 DEF6Q9H4E7 631 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 DIAPH3Q9NSV4 1193 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 MINPP1Q9UNW1 487 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 CASZ1Q86V15 1759 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 RPAP1Q9BWH6 1393 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-219ENST00000461159 A0A0D9SFI3 127 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 ZSCAN22P10073 491 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-219ENST00000461159 U2AF2P26368 475 aaKnown RBP eCLIP9.84□□□□□ -0.83
HDAC9-219ENST00000461159 HSPA4P34932 840 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 GYG1P46976 350 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 TTC12Q9H892 705 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-219ENST00000461159 STK32BQ9NY57 414 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 ZNF219Q9P2Y4 722 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-219ENST00000461159 AKAP2Q9Y2D5 859 aa9.84□□□□□ -0.83
HDAC9-219ENST00000461159 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-219ENST00000461159 SGSM2O43147 1006 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 MCAMP43121 646 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 ZAP70P43403 619 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 ST5P78524 1137 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 PTH1RQ03431 593 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 NMIQ13287 307 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-219ENST00000461159 COL9A3Q14050 684 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-219ENST00000461159 CCDC158Q5M9N0 1113 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 CCDC102BQ68D86 513 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 CCDC129Q6ZRS4 1044 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 NLGN1Q8N2Q7 840 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 EVI5LQ96CN4 794 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 MORC2Q9Y6X9 1032 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-219ENST00000461159 PPP2R5AQ15172 486 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 PUM3Q15397 648 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms