RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 WNK4Q96J92 1243 aa16.25■□□□□ 0.19
RAB11FIP3-207ENST00000461009 FZD1Q9UP38 647 aa16.25■□□□□ 0.19
RAB11FIP3-207ENST00000461009 AOX1Q06278 1338 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 MYH13Q9UKX3 1938 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 ZBTB22O15209 634 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 TBC1D8O95759 1140 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 GRIK5Q16478 980 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 TNNI3KQ59H18 835 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 CCDC102BQ68D86 513 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 CTU1Q7Z7A3 348 aaKnown RBP16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 FAM83AQ86UY5 434 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 SLF2Q8IX21 1173 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 TMEM39BQ9GZU3 492 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 CSADQ9Y600 493 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 FPGT-TNNI3KV9GXZ4 949 aa16.24■□□□□ 0.19
RAB11FIP3-207ENST00000461009 ADORA1P30542 326 aa16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 PHKA1P46020 1223 aa16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 MAP3K9P80192 1104 aa16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 PKN2Q16513 984 aaKnown RBP16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 NOM1Q5C9Z4 860 aaKnown RBP16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 CCDC158Q5M9N0 1113 aa16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 DCAF15Q66K64 600 aa16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 SPTY2D1Q68D10 685 aaPredicted RBP16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 APOBEC3HQ6NTF7 200 aaKnown RBP16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 KIF1BPQ96EK5 621 aa16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 CLMNQ96JQ2 1002 aa16.23■□□□□ 0.19
RAB11FIP3-207ENST00000461009 SALL1Q9NSC2 1324 aa16.22■□□□□ 0.19
RAB11FIP3-207ENST00000461009 UQCRFS1P1P0C7P4 283 aa16.22■□□□□ 0.19
RAB11FIP3-207ENST00000461009 IFNL1Q8IU54 200 aa16.22■□□□□ 0.19
RAB11FIP3-207ENST00000461009 CLASRPQ8N2M8 674 aaKnown RBP16.22■□□□□ 0.19
RAB11FIP3-207ENST00000461009 RHPN1Q8TCX5 695 aa16.22■□□□□ 0.19
RAB11FIP3-207ENST00000461009 TEPSINQ96N21 525 aa16.22■□□□□ 0.19
RAB11FIP3-207ENST00000461009 SSC5DA1L4H1 1573 aa16.21■□□□□ 0.19
RAB11FIP3-207ENST00000461009 GPR25O00155 361 aa16.21■□□□□ 0.19
RAB11FIP3-207ENST00000461009 APBB1O00213 710 aa16.21■□□□□ 0.19
RAB11FIP3-207ENST00000461009 CACNB3P54284 484 aa16.21■□□□□ 0.19
RAB11FIP3-207ENST00000461009 CFHR5Q9BXR6 569 aa16.21■□□□□ 0.19
RAB11FIP3-207ENST00000461009 ELP3Q9H9T3 547 aa16.21■□□□□ 0.19
RAB11FIP3-207ENST00000461009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.21■□□□□ 0.19
RAB11FIP3-207ENST00000461009 FKTNO75072 461 aa16.2■□□□□ 0.18
RAB11FIP3-207ENST00000461009 WDHD1O75717 1129 aaPredicted RBP16.2■□□□□ 0.18
RAB11FIP3-207ENST00000461009 TTC39AQ5SRH9 613 aa16.2■□□□□ 0.18
RAB11FIP3-207ENST00000461009 DZIP1Q86YF9 867 aaKnown RBP16.2■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ZNF296Q8WUU4 475 aaPredicted RBP16.2■□□□□ 0.18
RAB11FIP3-207ENST00000461009 OPTNQ96CV9 577 aa16.2■□□□□ 0.18
RAB11FIP3-207ENST00000461009 DCTPP1Q9H773 170 aa16.2■□□□□ 0.18
RAB11FIP3-207ENST00000461009 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
RAB11FIP3-207ENST00000461009 PDS5AQ29RF7 1337 aaKnown RBP16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 PRDX5P30044 214 aa16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 GTF2A2P52657 109 aa16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 AACSQ86V21 672 aa16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 FAM151AQ8WW52 585 aa16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 EAF2Q96CJ1 260 aaPredicted RBP16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 DBNDD2Q9BQY9 259 aa16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 LRRCC1Q9C099 1032 aa16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 CCDC8Q9H0W5 538 aaPredicted RBP16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 USP40Q9NVE5 1235 aa16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 DAGLAQ9Y4D2 1042 aa16.19■□□□□ 0.18
RAB11FIP3-207ENST00000461009 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ARID4AP29374 1257 aaPredicted RBP16.18■□□□□ 0.18
RAB11FIP3-207ENST00000461009 VGLL4Q14135 290 aa16.18■□□□□ 0.18
RAB11FIP3-207ENST00000461009 DIXDC1Q155Q3 683 aa16.18■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
RAB11FIP3-207ENST00000461009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.18■□□□□ 0.18
RAB11FIP3-207ENST00000461009 WRNIP1Q96S55 665 aa16.18■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ZNF341Q9BYN7 854 aa16.18■□□□□ 0.18
RAB11FIP3-207ENST00000461009 IL1RAPL2Q9NP60 686 aa16.18■□□□□ 0.18
RAB11FIP3-207ENST00000461009 RPAP1Q9BWH6 1393 aaPredicted RBP16.17■□□□□ 0.18
RAB11FIP3-207ENST00000461009 TCP10Q12799 353 aa16.17■□□□□ 0.18
RAB11FIP3-207ENST00000461009 RASGRF1Q13972 1273 aa16.17■□□□□ 0.18
RAB11FIP3-207ENST00000461009 CDC42EP5Q6NZY7 148 aa16.17■□□□□ 0.18
RAB11FIP3-207ENST00000461009 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.17■□□□□ 0.18
RAB11FIP3-207ENST00000461009 SPATA5Q8NB90 893 aa16.17■□□□□ 0.18
RAB11FIP3-207ENST00000461009 EXOC6Q8TAG9 804 aa16.17■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ZNF512BQ96KM6 892 aaPredicted RBP16.17■□□□□ 0.18
RAB11FIP3-207ENST00000461009 TESPA1A2RU30 521 aaPredicted RBP16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 GSTO1P78417 241 aa16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ERO1BQ86YB8 467 aa16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 CDAN1Q8IWY9 1227 aa16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 OTUD5Q96G74 571 aa16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 BCL11AQ9H165 835 aa16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 RWDD1Q9H446 243 aaPredicted RBP16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 HMG20BQ9P0W2 317 aa16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ZBTB47Q9UFB7 747 aaPredicted RBP16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 DBNLQ9UJU6 430 aaKnown RBP16.16■□□□□ 0.18
RAB11FIP3-207ENST00000461009 LDHCP07864 332 aa16.15■□□□□ 0.18
RAB11FIP3-207ENST00000461009 MLLT1Q03111 559 aaPredicted RBP16.15■□□□□ 0.18
RAB11FIP3-207ENST00000461009 HDAC1Q13547 482 aaPredicted RBP16.15■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ARHGEF6Q15052 776 aa16.15■□□□□ 0.18
RAB11FIP3-207ENST00000461009 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
RAB11FIP3-207ENST00000461009 ERO1AQ96HE7 468 aa16.15■□□□□ 0.18
RAB11FIP3-207ENST00000461009 CCL15-CCL14A0A0B4J2E2 113 aa16.14■□□□□ 0.17
RAB11FIP3-207ENST00000461009 SPDYE5A6NIY4 337 aa16.14■□□□□ 0.17
RAB11FIP3-207ENST00000461009 IGF2BP3O00425 579 aaKnown RBP eCLIP16.14■□□□□ 0.17
RAB11FIP3-207ENST00000461009 CETPP11597 493 aa16.14■□□□□ 0.17
RAB11FIP3-207ENST00000461009 GJA5P36382 358 aa16.14■□□□□ 0.17
RAB11FIP3-207ENST00000461009 MCAMP43121 646 aa16.14■□□□□ 0.17
RAB11FIP3-207ENST00000461009 CCL15Q16663 113 aa16.14■□□□□ 0.17
RAB11FIP3-207ENST00000461009 ZSCAN29Q8IWY8 852 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms