RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 HOOK2Q96ED9 719 aa17.08■□□□□ 0.32
SCAMP4-206ENST00000460767 MEIS3Q99687 375 aa17.08■□□□□ 0.32
SCAMP4-206ENST00000460767 SRRDQ9UH36 339 aa17.08■□□□□ 0.32
SCAMP4-206ENST00000460767 ZKSCAN2Q63HK3 967 aa17.07■□□□□ 0.32
SCAMP4-206ENST00000460767 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
SCAMP4-206ENST00000460767 JAG2Q9Y219 1238 aa17.07■□□□□ 0.32
SCAMP4-206ENST00000460767 CEP290O15078 2479 aa17.07■□□□□ 0.32
SCAMP4-206ENST00000460767 TCP10L2B9ZVM9 353 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 IRF6O14896 467 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 RLBP1P12271 317 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 HOXD10P28358 340 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 HIBADHP31937 336 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 PPATQ06203 517 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 MTX1Q13505 466 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 MTFR1Q15390 333 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 LDHAL6AQ6ZMR3 332 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 ANKRD23Q86SG2 305 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
SCAMP4-206ENST00000460767 CTGFP29279 349 aa17.05■□□□□ 0.32
SCAMP4-206ENST00000460767 GRK4P32298 578 aa17.05■□□□□ 0.32
SCAMP4-206ENST00000460767 CCDC57Q2TAC2 916 aa17.05■□□□□ 0.32
SCAMP4-206ENST00000460767 TMEM57Q8N5G2 664 aa17.05■□□□□ 0.32
SCAMP4-206ENST00000460767 TBC1D22AQ8WUA7 517 aa17.05■□□□□ 0.32
SCAMP4-206ENST00000460767 ZNF594Q96JF6 807 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-206ENST00000460767 FAM84BQ96KN1 310 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-206ENST00000460767 WRNIP1Q96S55 665 aa17.05■□□□□ 0.32
SCAMP4-206ENST00000460767 MGAMO43451 1857 aa17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 DCAF15Q66K64 600 aa17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 VGLL2Q8N8G2 317 aa17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 DPF3Q92784 378 aa17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 ZDHHC15Q96MV8 337 aa17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 KCNH4Q9UQ05 1017 aa17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 NR2E3Q9Y5X4 410 aa17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 SZT2Q5T011 3432 aa17.04■□□□□ 0.32
SCAMP4-206ENST00000460767 MYCP01106 439 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-206ENST00000460767 UBTFL1P0CB47 393 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-206ENST00000460767 OSBPP22059 807 aa17.03■□□□□ 0.32
SCAMP4-206ENST00000460767 CNNM1Q9NRU3 951 aa17.03■□□□□ 0.32
SCAMP4-206ENST00000460767 SUGT1Q9Y2Z0 365 aa17.03■□□□□ 0.32
SCAMP4-206ENST00000460767 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
SCAMP4-206ENST00000460767 MYPNQ86TC9 1320 aa17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 DLL1O00548 723 aa17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 PSMC4P43686 418 aa17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 GYG1P46976 350 aa17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 UBXN2AP68543 259 aa17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 CLUAP1Q96AJ1 413 aa17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 TMOD2Q9NZR1 351 aa17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 LRRFIP2Q9Y608 721 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-206ENST00000460767 MAST3O60307 1309 aa17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 GNAI3P08754 354 aa17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 CCL5P13501 91 aa17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 TAF7LQ5H9L4 462 aa17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 FBXO33Q7Z6M2 555 aa17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 SLAIN1Q8ND83 568 aa17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 RAET1EQ8TD07 263 aa17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 ZKSCAN4Q969J2 545 aaPredicted RBP17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 ZNF112Q9UJU3 913 aa17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
SCAMP4-206ENST00000460767 MROH5Q6ZUA9 1318 aa17■□□□□ 0.31
SCAMP4-206ENST00000460767 MOGSQ13724 837 aa17■□□□□ 0.31
SCAMP4-206ENST00000460767 GRIK5Q16478 980 aa17■□□□□ 0.31
SCAMP4-206ENST00000460767 NOL9Q5SY16 702 aaKnown RBP17■□□□□ 0.31
SCAMP4-206ENST00000460767 GPR153Q6NV75 609 aa17■□□□□ 0.31
SCAMP4-206ENST00000460767 ATG9AQ7Z3C6 839 aa17■□□□□ 0.31
SCAMP4-206ENST00000460767 SLC17A8Q8NDX2 589 aa17■□□□□ 0.31
SCAMP4-206ENST00000460767 U2AF1L4Q8WU68 220 aaKnown RBP17■□□□□ 0.31
SCAMP4-206ENST00000460767 ZNF341Q9BYN7 854 aa17■□□□□ 0.31
SCAMP4-206ENST00000460767 FBXO3Q9UK99 471 aa17■□□□□ 0.31
SCAMP4-206ENST00000460767 PDHXO00330 501 aa16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 PLIN1O60240 522 aa16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 FARP2O94887 1054 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 BCRP11274 1271 aa16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 LRRC24Q50LG9 513 aa16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 APOBEC3HQ6NTF7 200 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 KLHDC4Q8TBB5 520 aa16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 PARK7Q99497 189 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 RNF208Q9H0X6 261 aa16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 COPRSQ9NQ92 184 aa16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 CPA4Q9UI42 421 aa16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 HDAC5Q9UQL6 1122 aa16.99■□□□□ 0.31
SCAMP4-206ENST00000460767 FMNL1O95466 1100 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-206ENST00000460767 CACNB3P54284 484 aa16.98■□□□□ 0.31
SCAMP4-206ENST00000460767 FCGRTP55899 365 aa16.98■□□□□ 0.31
SCAMP4-206ENST00000460767 HHIPL2Q6UWX4 724 aa16.98■□□□□ 0.31
SCAMP4-206ENST00000460767 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-206ENST00000460767 EYA2O00167 538 aa16.97■□□□□ 0.31
SCAMP4-206ENST00000460767 CIAO1O76071 339 aa16.97■□□□□ 0.31
SCAMP4-206ENST00000460767 SGPL1O95470 568 aa16.97■□□□□ 0.31
SCAMP4-206ENST00000460767 FGFR2P21802 821 aa16.97■□□□□ 0.31
SCAMP4-206ENST00000460767 MNX1P50219 401 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-206ENST00000460767 PRKCZQ05513 592 aa16.97■□□□□ 0.31
SCAMP4-206ENST00000460767 PXYLP1Q8TE99 480 aa16.97■□□□□ 0.31
SCAMP4-206ENST00000460767 ALPK3Q96L96 1907 aa16.97■□□□□ 0.31
SCAMP4-206ENST00000460767 MYH13Q9UKX3 1938 aa16.97■□□□□ 0.31
SCAMP4-206ENST00000460767 RANBP2P49792 3224 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms