RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ZNF70Q9UC06 446 aaPredicted RBP26.56■■□□□ 1.84
SSNA1-202ENST00000459860 TNNI2P48788 182 aa26.55■■□□□ 1.84
SSNA1-202ENST00000459860 GSTO1P78417 241 aa26.55■■□□□ 1.84
SSNA1-202ENST00000459860 CCDC102AQ96A19 550 aa26.55■■□□□ 1.84
SSNA1-202ENST00000459860 MCOLN1Q9GZU1 580 aa26.55■■□□□ 1.84
SSNA1-202ENST00000459860 ZBTB47Q9UFB7 747 aaPredicted RBP26.55■■□□□ 1.84
SSNA1-202ENST00000459860 CCDC85CA6NKD9 419 aa26.54■■□□□ 1.84
SSNA1-202ENST00000459860 KIF23Q02241 960 aaPredicted RBP26.54■■□□□ 1.84
SSNA1-202ENST00000459860 TBC1D9Q6ZT07 1266 aa26.54■■□□□ 1.84
SSNA1-202ENST00000459860 DEFB129Q9H1M3 183 aa26.54■■□□□ 1.84
SSNA1-202ENST00000459860 DAGLAQ9Y4D2 1042 aa26.54■■□□□ 1.84
SSNA1-202ENST00000459860 SMARCA5O60264 1052 aaPredicted RBP26.53■■□□□ 1.84
SSNA1-202ENST00000459860 ZAP70P43403 619 aa26.53■■□□□ 1.84
SSNA1-202ENST00000459860 RGS19P49795 217 aa26.53■■□□□ 1.84
SSNA1-202ENST00000459860 ZNF157P51786 506 aaPredicted RBP26.53■■□□□ 1.84
SSNA1-202ENST00000459860 HDAC1Q13547 482 aaPredicted RBP26.53■■□□□ 1.84
SSNA1-202ENST00000459860 PAPPA2Q9BXP8 1791 aa26.53■■□□□ 1.84
SSNA1-202ENST00000459860 LDHCP07864 332 aa26.52■■□□□ 1.84
SSNA1-202ENST00000459860 SLC10A3P09131 477 aa26.52■■□□□ 1.84
SSNA1-202ENST00000459860 MECOMQ03112 1051 aa26.52■■□□□ 1.84
SSNA1-202ENST00000459860 AOX1Q06278 1338 aa26.52■■□□□ 1.84
SSNA1-202ENST00000459860 APOBEC3HQ6NTF7 200 aaKnown RBP26.52■■□□□ 1.84
SSNA1-202ENST00000459860 MYO5AQ9Y4I1 1855 aaKnown RBP26.52■■□□□ 1.84
SSNA1-202ENST00000459860 DOCK2Q92608 1830 aa26.51■■□□□ 1.83
SSNA1-202ENST00000459860 IGSF3O75054 1194 aa26.51■■□□□ 1.83
SSNA1-202ENST00000459860 CYP2E1P05181 493 aaPredicted RBP26.51■■□□□ 1.83
SSNA1-202ENST00000459860 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.51■■□□□ 1.83
SSNA1-202ENST00000459860 GCC1Q96CN9 775 aa26.51■■□□□ 1.83
SSNA1-202ENST00000459860 GPATCH3Q96I76 525 aa26.51■■□□□ 1.83
SSNA1-202ENST00000459860 RWDD1Q9H446 243 aaPredicted RBP26.51■■□□□ 1.83
SSNA1-202ENST00000459860 SAGE1Q9NXZ1 904 aa26.51■■□□□ 1.83
SSNA1-202ENST00000459860 MROH7-TTC4A0A0A0MT08 1334 aa26.5■■□□□ 1.83
SSNA1-202ENST00000459860 GAKO14976 1311 aa26.5■■□□□ 1.83
SSNA1-202ENST00000459860 TCP10L2B9ZVM9 353 aa26.5■■□□□ 1.83
SSNA1-202ENST00000459860 IRX6P78412 446 aaPredicted RBP26.5■■□□□ 1.83
SSNA1-202ENST00000459860 PRAMEF18Q5VWM3 479 aa26.5■■□□□ 1.83
SSNA1-202ENST00000459860 FKBP1BP68106 108 aa26.49■■□□□ 1.83
SSNA1-202ENST00000459860 RASA3Q14644 834 aa26.49■■□□□ 1.83
SSNA1-202ENST00000459860 NSUN4Q96CB9 384 aaKnown RBP26.49■■□□□ 1.83
SSNA1-202ENST00000459860 CSRNP1Q96S65 589 aa26.49■■□□□ 1.83
SSNA1-202ENST00000459860 NOL10Q9BSC4 688 aaKnown RBP26.49■■□□□ 1.83
SSNA1-202ENST00000459860 RNF186Q9NXI6 227 aa26.49■■□□□ 1.83
SSNA1-202ENST00000459860 TTLL12Q14166 644 aaPredicted RBP26.48■■□□□ 1.83
SSNA1-202ENST00000459860 TTF1Q15361 905 aaPredicted RBP26.48■■□□□ 1.83
SSNA1-202ENST00000459860 SUPT20HL1Q3ZLR7 823 aa26.48■■□□□ 1.83
SSNA1-202ENST00000459860 FKBP1CQ5VVH2 108 aa26.48■■□□□ 1.83
SSNA1-202ENST00000459860 FAM163AQ96GL9 167 aaPredicted RBP26.48■■□□□ 1.83
SSNA1-202ENST00000459860 BTDP43251 543 aa26.47■■□□□ 1.83
SSNA1-202ENST00000459860 CACNB3P54284 484 aa26.47■■□□□ 1.83
SSNA1-202ENST00000459860 DGKZQ13574 1117 aa26.47■■□□□ 1.83
SSNA1-202ENST00000459860 NAA16Q6N069 864 aaPredicted RBP26.47■■□□□ 1.83
SSNA1-202ENST00000459860 RASAL3Q86YV0 1011 aa26.47■■□□□ 1.83
SSNA1-202ENST00000459860 USP40Q9NVE5 1235 aa26.47■■□□□ 1.83
SSNA1-202ENST00000459860 IDH1O75874 414 aaKnown RBP26.46■■□□□ 1.83
SSNA1-202ENST00000459860 ATP5JP18859 108 aa26.46■■□□□ 1.83
SSNA1-202ENST00000459860 CDC42EP5Q6NZY7 148 aa26.46■■□□□ 1.83
SSNA1-202ENST00000459860 DNAJC2Q99543 621 aaKnown RBP26.46■■□□□ 1.83
SSNA1-202ENST00000459860 PIH1D3Q9NQM4 214 aaKnown RBP26.46■■□□□ 1.83
SSNA1-202ENST00000459860 MAP3K12Q12852 859 aa26.45■■□□□ 1.82
SSNA1-202ENST00000459860 FAM83AQ86UY5 434 aa26.45■■□□□ 1.82
SSNA1-202ENST00000459860 ECHDC1Q9NTX5 307 aa26.45■■□□□ 1.82
SSNA1-202ENST00000459860 NDUFB9Q9Y6M9 179 aa26.45■■□□□ 1.82
SSNA1-202ENST00000459860 AK9Q5TCS8 1911 aa26.45■■□□□ 1.82
SSNA1-202ENST00000459860 TRPA1O75762 1119 aa26.44■■□□□ 1.82
SSNA1-202ENST00000459860 ANKRD45Q5TZF3 282 aa26.44■■□□□ 1.82
SSNA1-202ENST00000459860 MOB2Q70IA6 237 aa26.44■■□□□ 1.82
SSNA1-202ENST00000459860 ARMC9Q7Z3E5 817 aa26.44■■□□□ 1.82
SSNA1-202ENST00000459860 BOLA2Q9H3K6 86 aa26.44■■□□□ 1.82
SSNA1-202ENST00000459860 GPR75-ASB3A0A0A6YYF3 556 aa26.43■■□□□ 1.82
SSNA1-202ENST00000459860 PPP1R12BO60237 982 aaPredicted RBP26.43■■□□□ 1.82
SSNA1-202ENST00000459860 TMED8Q6PL24 325 aaPredicted RBP26.43■■□□□ 1.82
SSNA1-202ENST00000459860 ZNF384Q8TF68 577 aa26.43■■□□□ 1.82
SSNA1-202ENST00000459860 TMEM39BQ9GZU3 492 aa26.43■■□□□ 1.82
SSNA1-202ENST00000459860 GOLIM4O00461 696 aa26.42■■□□□ 1.82
SSNA1-202ENST00000459860 BAG3O95817 575 aa26.42■■□□□ 1.82
SSNA1-202ENST00000459860 MAP4K4O95819 1239 aaPredicted RBP26.42■■□□□ 1.82
SSNA1-202ENST00000459860 MLLT1Q03111 559 aaPredicted RBP26.42■■□□□ 1.82
SSNA1-202ENST00000459860 HOOK2Q96ED9 719 aa26.42■■□□□ 1.82
SSNA1-202ENST00000459860 ANTXR1Q9H6X2 564 aa26.42■■□□□ 1.82
SSNA1-202ENST00000459860 RPAP1Q9BWH6 1393 aaPredicted RBP26.42■■□□□ 1.82
SSNA1-202ENST00000459860 PRKG1Q13976 671 aa26.41■■□□□ 1.82
SSNA1-202ENST00000459860 NBPF12Q5TAG4 269 aaPredicted RBP26.41■■□□□ 1.82
SSNA1-202ENST00000459860 FAM151AQ8WW52 585 aa26.41■■□□□ 1.82
SSNA1-202ENST00000459860 HAUS7Q99871 368 aa26.41■■□□□ 1.82
SSNA1-202ENST00000459860 PAG1Q9NWQ8 432 aa26.41■■□□□ 1.82
SSNA1-202ENST00000459860 MYH7P12883 1935 aa26.41■■□□□ 1.82
SSNA1-202ENST00000459860 SSC5DA1L4H1 1573 aa26.41■■□□□ 1.82
SSNA1-202ENST00000459860 PLCG2P16885 1265 aa26.4■■□□□ 1.82
SSNA1-202ENST00000459860 ANGEL1Q9UNK9 670 aaKnown RBP26.4■■□□□ 1.82
SSNA1-202ENST00000459860 TTC41PQ6P2S7 1318 aa26.39■■□□□ 1.82
SSNA1-202ENST00000459860 UBE2Q2LH0YL09 131 aa26.39■■□□□ 1.82
SSNA1-202ENST00000459860 CYP7A1P22680 504 aa26.39■■□□□ 1.82
SSNA1-202ENST00000459860 REM2Q8IYK8 340 aaPredicted RBP26.39■■□□□ 1.82
SSNA1-202ENST00000459860 MAGEB6Q8N7X4 407 aa26.39■■□□□ 1.82
SSNA1-202ENST00000459860 IDI2Q9BXS1 227 aa26.39■■□□□ 1.82
SSNA1-202ENST00000459860 CASP8AP2Q9UKL3 1982 aa26.38■■□□□ 1.81
SSNA1-202ENST00000459860 ERC2O15083 957 aa26.38■■□□□ 1.81
SSNA1-202ENST00000459860 TCP10Q12799 353 aa26.38■■□□□ 1.81
SSNA1-202ENST00000459860 NFIAQ12857 509 aa26.38■■□□□ 1.81
SSNA1-202ENST00000459860 SMC5Q8IY18 1101 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms