RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ATP8A2Q9NTI2 1148 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 TTF2Q9UNY4 1162 aaKnown RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 C10orf71Q711Q0 1435 aa6.91□□□□□ -1.3
RNU1-88P-201ENST00000459274 MINDY4BA8MYZ0 360 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 F8W031 263 aaPredicted RBP6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 SLC27A2O14975 620 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 HLA-DOAP06340 250 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 IARSP41252 1262 aaKnown RBP6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 PTH1RQ03431 593 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 MMRN1Q13201 1228 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 NECTIN1Q15223 517 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 AOC3Q16853 763 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 PPP4R3BQ5MIZ7 849 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 VPS53Q5VIR6 699 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 NFXL1Q6ZNB6 911 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 CCDC129Q6ZRS4 1044 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 ARHGAP27Q6ZUM4 889 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 TTC6Q86TZ1 520 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 IQCA1Q86XH1 822 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 IFNL3Q8IZI9 196 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 ESR2Q92731 530 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 OSBP2Q969R2 916 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 STRBPQ96SI9 672 aaKnown RBP6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 SEC62Q99442 399 aaKnown RBP6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 UBAC1Q9BSL1 405 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 PUS7LQ9H0K6 701 aaKnown RBP6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 ARMT1Q9H993 441 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 DBNDD1Q9H9R9 158 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 SH2B1Q9NRF2 756 aaPredicted RBP6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 AATFQ9NY61 560 aaKnown RBP eCLIP6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 ARPP21Q9UBL0 812 aaPredicted RBP6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 WWC3Q9ULE0 1092 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 ZNRF3Q9ULT6 936 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 FAM205AQ6ZU69 1335 aa6.9□□□□□ -1.3
RNU1-88P-201ENST00000459274 COL11A2P13942 1736 aaPredicted RBP6.9□□□□□ -1.31
RNU1-88P-201ENST00000459274 MAST2Q6P0Q8 1798 aa6.9□□□□□ -1.31
RNU1-88P-201ENST00000459274 M0R2C6 588 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 FGAP02671 866 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 TNNI2P48788 182 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 HDLBPQ00341 1268 aaKnown RBP6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 ALX1Q15699 326 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 TSGA10IPQ3SY00 556 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 RRP12Q5JTH9 1297 aaKnown RBP6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 DPY19L2Q6NUT2 758 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 HHIPL2Q6UWX4 724 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 DHX32Q7L7V1 743 aaKnown RBP6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 TXNRD3Q86VQ6 643 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 ZSCAN29Q8IWY8 852 aaPredicted RBP6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 TEX11Q8IYF3 940 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 ZNF444Q8N0Y2 327 aaPredicted RBP6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 NSUN4Q96CB9 384 aaKnown RBP6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 MRIQ9BWK5 157 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 PDGFDQ9GZP0 370 aaPredicted RBP6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 MKNK2Q9HBH9 465 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 MCM9Q9NXL9 1143 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 LIMCH1Q9UPQ0 1083 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 JAG2Q9Y219 1238 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 SNX14Q9Y5W7 946 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 MYH1P12882 1939 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 MYH8P13535 1937 aa6.89□□□□□ -1.31
RNU1-88P-201ENST00000459274 ARFGEF1Q9Y6D6 1849 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 KIAA1551Q9HCM1 1747 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 MROH7-TTC4A0A0A0MT08 1334 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 ZMYM6O95789 1325 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 CCDC196A0A1B0GTZ2 297 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 CCDC69A6NI79 296 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 GOLGA6L22H0YM25 854 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 CPLX1O14810 134 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 KLRK1P26718 216 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 PRDX5P30044 214 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 BTDP43251 543 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 DLGAP5Q15398 846 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 GPR162Q16538 588 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 AKNAD1Q5T1N1 836 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 CIAPIN1Q6FI81 312 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 NOL8Q76FK4 1167 aaKnown RBP6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 ZNF589Q86UQ0 364 aaPredicted RBP6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 CRACR2BQ8N4Y2 399 aaPredicted RBP6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 AGBL3Q8NEM8 1001 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 HOOK2Q96ED9 719 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 FAM163AQ96GL9 167 aaPredicted RBP6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 TMEM87BQ96K49 555 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 GPR101Q96P66 508 aaPredicted RBP6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 UPF3BQ9BZI7 483 aaKnown RBP6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 SLKQ9H2G2 1235 aaPredicted RBP6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 ZSWIM6Q9HCJ5 1215 aa6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 BAZ2AQ9UIF9 1905 aaKnown RBP6.88□□□□□ -1.31
RNU1-88P-201ENST00000459274 GPR75-ASB3A0A0A6YYF3 556 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 TCRBV5S4A2TA0A5A2 114 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 C19orf67A6NJJ6 358 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 TSPY2A6NKD2 308 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 E7EWF7 191 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 H7C1D1 291 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 GRIN3BO60391 1043 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 RANBP6O60518 1105 aaKnown RBP6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 CDKL5O76039 1030 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 USP17L8P0C7I0 530 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 PDCP20941 246 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 RPS6KB1P23443 525 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms