RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 USP40Q9NVE5 1235 aa22.9■■□□□ 1.26
USP39-209ENST00000458268 TSKSQ9UJT2 592 aa22.9■■□□□ 1.26
USP39-209ENST00000458268 PDS5AQ29RF7 1337 aaKnown RBP22.89■■□□□ 1.26
USP39-209ENST00000458268 AKAP11Q9UKA4 1901 aa22.89■■□□□ 1.25
USP39-209ENST00000458268 SLC10A3P09131 477 aa22.89■■□□□ 1.25
USP39-209ENST00000458268 MAP2K2P36507 400 aa22.89■■□□□ 1.25
USP39-209ENST00000458268 MECOMQ03112 1051 aa22.89■■□□□ 1.25
USP39-209ENST00000458268 TCP10Q12799 353 aa22.89■■□□□ 1.25
USP39-209ENST00000458268 WBP1LQ9NX94 342 aa22.89■■□□□ 1.25
USP39-209ENST00000458268 FAM155AB1AL88 458 aaPredicted RBP22.88■■□□□ 1.25
USP39-209ENST00000458268 KIF23Q02241 960 aaPredicted RBP22.88■■□□□ 1.25
USP39-209ENST00000458268 CDC42EP5Q6NZY7 148 aa22.88■■□□□ 1.25
USP39-209ENST00000458268 SLF2Q8IX21 1173 aa22.88■■□□□ 1.25
USP39-209ENST00000458268 CLASRPQ8N2M8 674 aaKnown RBP22.88■■□□□ 1.25
USP39-209ENST00000458268 KIF1BPQ96EK5 621 aa22.88■■□□□ 1.25
USP39-209ENST00000458268 CRBNQ96SW2 442 aa22.88■■□□□ 1.25
USP39-209ENST00000458268 MRIQ9BWK5 157 aa22.88■■□□□ 1.25
USP39-209ENST00000458268 NDUFB9Q9Y6M9 179 aa22.88■■□□□ 1.25
USP39-209ENST00000458268 IFIT2P09913 472 aaKnown RBP22.87■■□□□ 1.25
USP39-209ENST00000458268 BTDP43251 543 aa22.87■■□□□ 1.25
USP39-209ENST00000458268 ZAP70P43403 619 aa22.87■■□□□ 1.25
USP39-209ENST00000458268 OTOFQ9HC10 1997 aa22.87■■□□□ 1.25
USP39-209ENST00000458268 IREB2P48200 963 aaKnown RBP22.86■■□□□ 1.25
USP39-209ENST00000458268 CLMNQ96JQ2 1002 aa22.86■■□□□ 1.25
USP39-209ENST00000458268 MAST2Q6P0Q8 1798 aa22.86■■□□□ 1.25
USP39-209ENST00000458268 MROH7-TTC4A0A0A0MT08 1334 aa22.85■■□□□ 1.25
USP39-209ENST00000458268 PCNTO95613 3336 aa22.85■■□□□ 1.25
USP39-209ENST00000458268 CTCFP49711 727 aaPredicted RBP22.85■■□□□ 1.25
USP39-209ENST00000458268 NFIAQ12857 509 aa22.85■■□□□ 1.25
USP39-209ENST00000458268 PICALMQ13492 652 aa22.85■■□□□ 1.25
USP39-209ENST00000458268 SMARCA5O60264 1052 aaPredicted RBP22.84■■□□□ 1.25
USP39-209ENST00000458268 RAB11FIP3O75154 756 aa22.84■■□□□ 1.25
USP39-209ENST00000458268 LBX1P52954 281 aa22.84■■□□□ 1.25
USP39-209ENST00000458268 GSTO1P78417 241 aa22.84■■□□□ 1.25
USP39-209ENST00000458268 SLC10A4Q96EP9 437 aa22.84■■□□□ 1.25
USP39-209ENST00000458268 TEPSINQ96N21 525 aa22.84■■□□□ 1.25
USP39-209ENST00000458268 NOL10Q9BSC4 688 aaKnown RBP22.84■■□□□ 1.25
USP39-209ENST00000458268 USP2O75604 605 aaPredicted RBP22.83■■□□□ 1.25
USP39-209ENST00000458268 CYP2E1P05181 493 aaPredicted RBP22.83■■□□□ 1.25
USP39-209ENST00000458268 LDHCP07864 332 aa22.83■■□□□ 1.25
USP39-209ENST00000458268 NSUN4Q96CB9 384 aaKnown RBP22.83■■□□□ 1.25
USP39-209ENST00000458268 GAKO14976 1311 aa22.82■■□□□ 1.24
USP39-209ENST00000458268 IDH1O75874 414 aaKnown RBP22.82■■□□□ 1.24
USP39-209ENST00000458268 COL13A1Q5TAT6 717 aaPredicted RBP22.82■■□□□ 1.24
USP39-209ENST00000458268 NAA16Q6N069 864 aaPredicted RBP22.82■■□□□ 1.24
USP39-209ENST00000458268 FAM83AQ86UY5 434 aa22.82■■□□□ 1.24
USP39-209ENST00000458268 ZSCAN29Q8IWY8 852 aaPredicted RBP22.82■■□□□ 1.24
USP39-209ENST00000458268 DNAJC2Q99543 621 aaKnown RBP22.82■■□□□ 1.24
USP39-209ENST00000458268 ELP3Q9H9T3 547 aa22.82■■□□□ 1.24
USP39-209ENST00000458268 PIH1D3Q9NQM4 214 aaKnown RBP22.82■■□□□ 1.24
USP39-209ENST00000458268 DOCK2Q92608 1830 aa22.81■■□□□ 1.24
USP39-209ENST00000458268 ZBTB22O15209 634 aa22.81■■□□□ 1.24
USP39-209ENST00000458268 HSPA8P11142 646 aaKnown RBP22.81■■□□□ 1.24
USP39-209ENST00000458268 RGS3P49796 1198 aa22.81■■□□□ 1.24
USP39-209ENST00000458268 LDLRAD1Q5T700 205 aa22.81■■□□□ 1.24
USP39-209ENST00000458268 MIGA2Q7L4E1 593 aa22.81■■□□□ 1.24
USP39-209ENST00000458268 ZNF384Q8TF68 577 aa22.81■■□□□ 1.24
USP39-209ENST00000458268 FAM151AQ8WW52 585 aa22.81■■□□□ 1.24
USP39-209ENST00000458268 LRRCC1Q9C099 1032 aa22.81■■□□□ 1.24
USP39-209ENST00000458268 FKBP1CQ5VVH2 108 aa22.8■■□□□ 1.24
USP39-209ENST00000458268 ANKRD13AQ8IZ07 590 aa22.8■■□□□ 1.24
USP39-209ENST00000458268 FAM198AQ9UFP1 575 aa22.8■■□□□ 1.24
USP39-209ENST00000458268 ZFPM1Q8IX07 1006 aa22.79■■□□□ 1.24
USP39-209ENST00000458268 ZNF512BQ96KM6 892 aaPredicted RBP22.79■■□□□ 1.24
USP39-209ENST00000458268 AATFQ9NY61 560 aaKnown RBP eCLIP22.79■■□□□ 1.24
USP39-209ENST00000458268 PCDHB15Q9Y5E8 787 aa22.79■■□□□ 1.24
USP39-209ENST00000458268 TRPA1O75762 1119 aa22.78■■□□□ 1.24
USP39-209ENST00000458268 MAP3K11Q16584 847 aa22.78■■□□□ 1.24
USP39-209ENST00000458268 DCAF15Q66K64 600 aa22.78■■□□□ 1.24
USP39-209ENST00000458268 HOOK2Q96ED9 719 aa22.78■■□□□ 1.24
USP39-209ENST00000458268 WRNIP1Q96S55 665 aa22.78■■□□□ 1.24
USP39-209ENST00000458268 CSRNP1Q96S65 589 aa22.78■■□□□ 1.24
USP39-209ENST00000458268 ANTXR1Q9H6X2 564 aa22.78■■□□□ 1.24
USP39-209ENST00000458268 CSADQ9Y600 493 aa22.78■■□□□ 1.24
USP39-209ENST00000458268 GPR75-ASB3A0A0A6YYF3 556 aa22.77■■□□□ 1.24
USP39-209ENST00000458268 SPRYD7Q5W111 196 aa22.77■■□□□ 1.24
USP39-209ENST00000458268 TEX11Q8IYF3 940 aa22.77■■□□□ 1.24
USP39-209ENST00000458268 WNK4Q96J92 1243 aa22.77■■□□□ 1.24
USP39-209ENST00000458268 DDX4Q9NQI0 724 aaKnown RBP22.77■■□□□ 1.24
USP39-209ENST00000458268 RPAP1Q9BWH6 1393 aaPredicted RBP22.76■■□□□ 1.23
USP39-209ENST00000458268 GOLIM4O00461 696 aa22.76■■□□□ 1.23
USP39-209ENST00000458268 CYP7A1P22680 504 aa22.76■■□□□ 1.23
USP39-209ENST00000458268 MAP3K9P80192 1104 aa22.76■■□□□ 1.23
USP39-209ENST00000458268 MAGEB6Q8N7X4 407 aa22.76■■□□□ 1.23
USP39-209ENST00000458268 SH3RF3Q8TEJ3 882 aaPredicted RBP22.76■■□□□ 1.23
USP39-209ENST00000458268 FAM163AQ96GL9 167 aaPredicted RBP22.76■■□□□ 1.23
USP39-209ENST00000458268 WDHD1O75717 1129 aaPredicted RBP22.75■■□□□ 1.23
USP39-209ENST00000458268 VGLL4Q14135 290 aa22.75■■□□□ 1.23
USP39-209ENST00000458268 CNKSR2Q8WXI2 1034 aa22.75■■□□□ 1.23
USP39-209ENST00000458268 ZKSCAN4Q969J2 545 aaPredicted RBP22.75■■□□□ 1.23
USP39-209ENST00000458268 ZNF341Q9BYN7 854 aa22.75■■□□□ 1.23
USP39-209ENST00000458268 BOLA2Q9H3K6 86 aa22.75■■□□□ 1.23
USP39-209ENST00000458268 RNF186Q9NXI6 227 aa22.75■■□□□ 1.23
USP39-209ENST00000458268 SUPT16HQ9Y5B9 1047 aaKnown RBP22.75■■□□□ 1.23
USP39-209ENST00000458268 CASP8AP2Q9UKL3 1982 aa22.74■■□□□ 1.23
USP39-209ENST00000458268 CA12O43570 354 aa22.74■■□□□ 1.23
USP39-209ENST00000458268 ENTPD3O75355 529 aa22.74■■□□□ 1.23
USP39-209ENST00000458268 BAG3O95817 575 aa22.74■■□□□ 1.23
USP39-209ENST00000458268 RHBDL3P58872 404 aa22.74■■□□□ 1.23
USP39-209ENST00000458268 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms