RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SLC9C1Q4G0N8 1177 aa18.14■□□□□ 0.49
UPF3AP2-201ENST00000457924 ZNF333Q96JL9 665 aa18.14■□□□□ 0.49
UPF3AP2-201ENST00000457924 FAM84BQ96KN1 310 aaPredicted RBP18.14■□□□□ 0.49
UPF3AP2-201ENST00000457924 TMEM39BQ9GZU3 492 aa18.14■□□□□ 0.49
UPF3AP2-201ENST00000457924 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
UPF3AP2-201ENST00000457924 CDAN1Q8IWY9 1227 aa18.13■□□□□ 0.49
UPF3AP2-201ENST00000457924 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.13■□□□□ 0.49
UPF3AP2-201ENST00000457924 OTUD5Q96G74 571 aa18.13■□□□□ 0.49
UPF3AP2-201ENST00000457924 STK24Q9Y6E0 443 aa18.13■□□□□ 0.49
UPF3AP2-201ENST00000457924 SLC4A8Q2Y0W8 1093 aa18.12■□□□□ 0.49
UPF3AP2-201ENST00000457924 VPS37DQ86XT2 251 aa18.12■□□□□ 0.49
UPF3AP2-201ENST00000457924 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
UPF3AP2-201ENST00000457924 PTCH2Q9Y6C5 1203 aa18.12■□□□□ 0.49
UPF3AP2-201ENST00000457924 CENPFP49454 3210 aa18.12■□□□□ 0.49
UPF3AP2-201ENST00000457924 MKI67P46013 3256 aaKnown RBP18.12■□□□□ 0.49
UPF3AP2-201ENST00000457924 ALDH1L1O75891 902 aa18.11■□□□□ 0.49
UPF3AP2-201ENST00000457924 FAM43AQ8N2R8 423 aa18.11■□□□□ 0.49
UPF3AP2-201ENST00000457924 PUS3Q9BZE2 481 aaKnown RBP18.11■□□□□ 0.49
UPF3AP2-201ENST00000457924 MROH5Q6ZUA9 1318 aa18.11■□□□□ 0.49
UPF3AP2-201ENST00000457924 SPDYE5A6NIY4 337 aa18.1■□□□□ 0.49
UPF3AP2-201ENST00000457924 FRAT2O75474 233 aaPredicted RBP18.1■□□□□ 0.49
UPF3AP2-201ENST00000457924 CETPP11597 493 aa18.1■□□□□ 0.49
UPF3AP2-201ENST00000457924 KIF22Q14807 665 aa18.1■□□□□ 0.49
UPF3AP2-201ENST00000457924 SLC4A10Q6U841 1118 aa18.1■□□□□ 0.49
UPF3AP2-201ENST00000457924 TBC1D22AQ8WUA7 517 aa18.1■□□□□ 0.49
UPF3AP2-201ENST00000457924 SRCIN1Q9C0H9 1055 aa18.1■□□□□ 0.49
UPF3AP2-201ENST00000457924 HDLBPQ00341 1268 aaKnown RBP18.09■□□□□ 0.49
UPF3AP2-201ENST00000457924 CHAF1AQ13111 956 aaPredicted RBP18.09■□□□□ 0.49
UPF3AP2-201ENST00000457924 CAVIN4Q5BKX8 364 aa18.09■□□□□ 0.49
UPF3AP2-201ENST00000457924 TEKT1Q969V4 418 aa18.09■□□□□ 0.49
UPF3AP2-201ENST00000457924 HOOK2Q96ED9 719 aa18.09■□□□□ 0.49
UPF3AP2-201ENST00000457924 TMOD2Q9NZR1 351 aa18.09■□□□□ 0.49
UPF3AP2-201ENST00000457924 IQSEC3Q9UPP2 1182 aaPredicted RBP18.09■□□□□ 0.49
UPF3AP2-201ENST00000457924 TLR2O60603 784 aa18.08■□□□□ 0.48
UPF3AP2-201ENST00000457924 CACNB3P54284 484 aa18.08■□□□□ 0.48
UPF3AP2-201ENST00000457924 FBXO33Q7Z6M2 555 aa18.08■□□□□ 0.48
UPF3AP2-201ENST00000457924 ERO1BQ86YB8 467 aa18.08■□□□□ 0.48
UPF3AP2-201ENST00000457924 ZCCHC17Q9NP64 241 aaKnown RBP18.08■□□□□ 0.48
UPF3AP2-201ENST00000457924 RIPOR2Q9Y4F9 1068 aa18.08■□□□□ 0.48
UPF3AP2-201ENST00000457924 BRCA2P51587 3418 aa18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 MYCP01106 439 aaPredicted RBP18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 GNRH1P01148 92 aa18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 FXR1P51114 621 aaKnown RBP eCLIP18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 LACTBP83111 547 aaPredicted RBP18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 SNAPC2Q13487 334 aa18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 GRIK5Q16478 980 aa18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 SUCLG2Q96I99 432 aa18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 WRNIP1Q96S55 665 aa18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 SNCAIPQ9Y6H5 919 aa18.07■□□□□ 0.48
UPF3AP2-201ENST00000457924 BTBD19C9JJ37 291 aa18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 METTL24Q5JXM2 366 aa18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 FAM83AQ86UY5 434 aa18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 SH3TC2Q8TF17 1288 aa18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 ZKSCAN4Q969J2 545 aaPredicted RBP18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 KAZALD1Q96I82 304 aa18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 MRIQ9BWK5 157 aa18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 ARHGAP39Q9C0H5 1083 aa18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 MRS2Q9HD23 443 aa18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 COLQQ9Y215 455 aaPredicted RBP18.06■□□□□ 0.48
UPF3AP2-201ENST00000457924 MAST3O60307 1309 aa18.05■□□□□ 0.48
UPF3AP2-201ENST00000457924 IRF6O14896 467 aa18.05■□□□□ 0.48
UPF3AP2-201ENST00000457924 NBPF7P0C2Y1 421 aaPredicted RBP18.05■□□□□ 0.48
UPF3AP2-201ENST00000457924 PRMT2P55345 433 aa18.05■□□□□ 0.48
UPF3AP2-201ENST00000457924 PPIL2Q13356 520 aa18.05■□□□□ 0.48
UPF3AP2-201ENST00000457924 DCAF15Q66K64 600 aa18.05■□□□□ 0.48
UPF3AP2-201ENST00000457924 ZDHHC15Q96MV8 337 aa18.05■□□□□ 0.48
UPF3AP2-201ENST00000457924 ZSWIM8A7E2V4 1837 aa18.05■□□□□ 0.48
UPF3AP2-201ENST00000457924 LRRC24Q50LG9 513 aa18.04■□□□□ 0.48
UPF3AP2-201ENST00000457924 FKBP1CQ5VVH2 108 aa18.04■□□□□ 0.48
UPF3AP2-201ENST00000457924 UTYO14607 1347 aa18.03■□□□□ 0.48
UPF3AP2-201ENST00000457924 PDE8BO95263 885 aa18.03■□□□□ 0.48
UPF3AP2-201ENST00000457924 PPATQ06203 517 aa18.03■□□□□ 0.48
UPF3AP2-201ENST00000457924 ZNF341Q9BYN7 854 aa18.03■□□□□ 0.48
UPF3AP2-201ENST00000457924 BICC1Q9H694 974 aaKnown RBP18.03■□□□□ 0.48
UPF3AP2-201ENST00000457924 SUGT1Q9Y2Z0 365 aa18.03■□□□□ 0.48
UPF3AP2-201ENST00000457924 BCAMP50895 628 aa18.02■□□□□ 0.48
UPF3AP2-201ENST00000457924 RABL6Q3YEC7 729 aaPredicted RBP18.02■□□□□ 0.48
UPF3AP2-201ENST00000457924 APOBEC3HQ6NTF7 200 aaKnown RBP18.02■□□□□ 0.48
UPF3AP2-201ENST00000457924 HHIPL2Q6UWX4 724 aa18.02■□□□□ 0.48
UPF3AP2-201ENST00000457924 RPAP1Q9BWH6 1393 aaPredicted RBP18.02■□□□□ 0.47
UPF3AP2-201ENST00000457924 H0YGN5 161 aa18.01■□□□□ 0.47
UPF3AP2-201ENST00000457924 HOXD10P28358 340 aa18.01■□□□□ 0.47
UPF3AP2-201ENST00000457924 MIGA2Q7L4E1 593 aa18.01■□□□□ 0.47
UPF3AP2-201ENST00000457924 EFCAB3Q8N7B9 438 aa18.01■□□□□ 0.47
UPF3AP2-201ENST00000457924 VGLL2Q8N8G2 317 aa18.01■□□□□ 0.47
UPF3AP2-201ENST00000457924 AK9Q5TCS8 1911 aa18.01■□□□□ 0.47
UPF3AP2-201ENST00000457924 MYH13Q9UKX3 1938 aa18■□□□□ 0.47
UPF3AP2-201ENST00000457924 IFIT1P09914 478 aaKnown RBP18■□□□□ 0.47
UPF3AP2-201ENST00000457924 C17orf99Q6UX52 265 aa18■□□□□ 0.47
UPF3AP2-201ENST00000457924 ANKRD23Q86SG2 305 aa18■□□□□ 0.47
UPF3AP2-201ENST00000457924 ANKRD44Q8N8A2 993 aa18■□□□□ 0.47
UPF3AP2-201ENST00000457924 GOLGA6L2Q8N9W4 650 aaPredicted RBP18■□□□□ 0.47
UPF3AP2-201ENST00000457924 CPA4Q9UI42 421 aa18■□□□□ 0.47
UPF3AP2-201ENST00000457924 KIF16BQ96L93 1317 aa17.99■□□□□ 0.47
UPF3AP2-201ENST00000457924 PDHXO00330 501 aa17.99■□□□□ 0.47
UPF3AP2-201ENST00000457924 PSMC4P43686 418 aa17.99■□□□□ 0.47
UPF3AP2-201ENST00000457924 PUM3Q15397 648 aaKnown RBP17.99■□□□□ 0.47
UPF3AP2-201ENST00000457924 NKX2-3Q8TAU0 364 aa17.99■□□□□ 0.47
UPF3AP2-201ENST00000457924 RAET1EQ8TD07 263 aa17.99■□□□□ 0.47
UPF3AP2-201ENST00000457924 SRRDQ9UH36 339 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms