RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 RGS22Q8NE09 1264 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 IGF1RP08069 1367 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 EFCAB8A8MWE9 144 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 EXOC4Q96A65 974 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 CDC5LQ99459 802 aaKnown RBP5.83□□□□□ -1.48
CSMD3-204ENST00000455883 SPC25Q9HBM1 224 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 F8W8V4 182 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 MAPK8IP2Q13387 824 aaPredicted RBP5.83□□□□□ -1.48
CSMD3-204ENST00000455883 CAVIN4Q5BKX8 364 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 CYP26C1Q6V0L0 522 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 SPHKAPQ2M3C7 1700 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 CDC42BPBQ9Y5S2 1711 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 CCDC96Q2M329 555 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 PDXDC1Q6P996 788 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 PARD3Q8TEW0 1356 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 MTIF2P46199 727 aaKnown RBP5.83□□□□□ -1.48
CSMD3-204ENST00000455883 SLC8A3P57103 927 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 CHMP4BP1P59074 171 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 TMEM132AQ24JP5 1023 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 NCOA7Q8NI08 942 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 RABGGTAQ92696 567 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 KIF9Q9HAQ2 790 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 CCDC151A5D8V7 595 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 N4BP3O15049 544 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 IFIT1P09914 478 aaKnown RBP5.83□□□□□ -1.48
CSMD3-204ENST00000455883 PSMA4P25789 261 aaKnown RBP5.83□□□□□ -1.48
CSMD3-204ENST00000455883 YWHAEP62258 255 aaKnown RBP5.83□□□□□ -1.48
CSMD3-204ENST00000455883 NCBP1Q09161 790 aaKnown RBP5.83□□□□□ -1.48
CSMD3-204ENST00000455883 HAUS3Q68CZ6 603 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 ECHDC1Q9NTX5 307 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 CEP152O94986 1710 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 RNF40O75150 1001 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 ILF2Q12905 390 aaKnown RBP5.83□□□□□ -1.48
CSMD3-204ENST00000455883 DONSONQ9NYP3 566 aa5.83□□□□□ -1.48
CSMD3-204ENST00000455883 TTC37Q6PGP7 1564 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 EIF3BP55884 814 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 FAM160A1Q05DH4 1040 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 CNNM4Q6P4Q7 775 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 MIER3Q7Z3K6 550 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 GRK7Q8WTQ7 553 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 SDCCAG3Q96C92 435 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 FAM129AQ9BZQ8 928 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 CCDC88AQ3V6T2 1871 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 PCK1P35558 622 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 KPNA2P52292 529 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 GALNT17Q6IS24 598 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 MLKLQ8NB16 471 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 NOX5Q96PH1 765 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 CENPKQ9BS16 269 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 TXLNGQ9NUQ3 528 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 BRPF3Q9ULD4 1205 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 KRT13P13646 458 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 LZICQ8WZA0 190 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 ACTR5Q9H9F9 607 aaPredicted RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 ALDH1L1O75891 902 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 RANBP1P43487 201 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 SSRP1Q08945 709 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 DYNC1I2Q13409 638 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 ESR2Q92731 530 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 NOC2LQ9Y3T9 749 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 MAP3K7CLP57077 242 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 ASPHQ12797 758 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 SEL1L2Q5TEA6 688 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 PPP1R21Q6ZMI0 780 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 TRPM2O94759 1503 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 SYCP2Q9BX26 1530 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 GOLGA8JA6NMD2 632 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 HNRNPRO43390 633 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 DDX27Q96GQ7 796 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 CTTNBP2NLQ9P2B4 639 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 EVA1CP58658 441 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 NOP14P78316 857 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 FNBP4Q8N3X1 1017 aaPredicted RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 PPP1R9BQ96SB3 815 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 BATF3Q9NR55 127 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 CCDC61Q9Y6R9 512 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 GOLGA8KD6RF30 607 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 ZSCAN23Q3MJ62 389 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 CATSPER1Q8NEC5 780 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 DYTNA2CJ06 578 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 NBPF6Q5VWK0 638 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 NBPF4Q96M43 638 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 ZMYND15Q9H091 742 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 CACYBPQ9HB71 228 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 ABCF3Q9NUQ8 709 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 HACD3Q9P035 362 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 N4BP1O75113 896 aaKnown RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 UQCRFS1P1P0C7P4 283 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 TATP17735 454 aaPredicted RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 THEMISQ8N1K5 641 aaPredicted RBP5.82□□□□□ -1.48
CSMD3-204ENST00000455883 NEUROD6Q96NK8 337 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 PHLPP2Q6ZVD8 1323 aa5.82□□□□□ -1.48
CSMD3-204ENST00000455883 SYT1P21579 422 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 CUL4BQ13620 913 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 NEK11Q8NG66 645 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 TSPYL2Q9H2G4 693 aaPredicted RBP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 CUEDC2Q9H467 287 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 ST5P78524 1137 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 SDCCAG8Q86SQ7 713 aaPredicted RBP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 ZNF277Q9NRM2 450 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms