RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 USP44Q9H0E7 712 aa16.66■□□□□ 0.26
PSMC4-202ENST00000455878 ZCCHC17Q9NP64 241 aaKnown RBP16.66■□□□□ 0.26
PSMC4-202ENST00000455878 KIF16BQ96L93 1317 aa16.65■□□□□ 0.26
PSMC4-202ENST00000455878 EYA2O00167 538 aa16.65■□□□□ 0.26
PSMC4-202ENST00000455878 IRF6O14896 467 aa16.65■□□□□ 0.26
PSMC4-202ENST00000455878 TLR2O60603 784 aa16.65■□□□□ 0.26
PSMC4-202ENST00000455878 MIGA2Q7L4E1 593 aa16.65■□□□□ 0.26
PSMC4-202ENST00000455878 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
PSMC4-202ENST00000455878 LPIN2Q92539 896 aa16.65■□□□□ 0.26
PSMC4-202ENST00000455878 GNL3LQ9NVN8 582 aaKnown RBP16.65■□□□□ 0.26
PSMC4-202ENST00000455878 NOB1Q9ULX3 412 aaKnown RBP16.65■□□□□ 0.26
PSMC4-202ENST00000455878 A0A1B0GUL6 1792 aa16.64■□□□□ 0.26
PSMC4-202ENST00000455878 GNRH1P01148 92 aa16.64■□□□□ 0.25
PSMC4-202ENST00000455878 PPATQ06203 517 aa16.64■□□□□ 0.25
PSMC4-202ENST00000455878 PPIL2Q13356 520 aa16.64■□□□□ 0.25
PSMC4-202ENST00000455878 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
PSMC4-202ENST00000455878 ZNF333Q96JL9 665 aa16.64■□□□□ 0.25
PSMC4-202ENST00000455878 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
PSMC4-202ENST00000455878 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
PSMC4-202ENST00000455878 SNCAIPQ9Y6H5 919 aa16.64■□□□□ 0.25
PSMC4-202ENST00000455878 BTBD19C9JJ37 291 aa16.63■□□□□ 0.25
PSMC4-202ENST00000455878 MYCP01106 439 aaPredicted RBP16.63■□□□□ 0.25
PSMC4-202ENST00000455878 FAM151AQ8WW52 585 aa16.63■□□□□ 0.25
PSMC4-202ENST00000455878 HDAC5Q9UQL6 1122 aa16.63■□□□□ 0.25
PSMC4-202ENST00000455878 FGFR2P21802 821 aa16.62■□□□□ 0.25
PSMC4-202ENST00000455878 HOXD10P28358 340 aa16.62■□□□□ 0.25
PSMC4-202ENST00000455878 PRMT2P55345 433 aa16.62■□□□□ 0.25
PSMC4-202ENST00000455878 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
PSMC4-202ENST00000455878 LACTBP83111 547 aaPredicted RBP16.62■□□□□ 0.25
PSMC4-202ENST00000455878 CAP1Q01518 475 aa16.62■□□□□ 0.25
PSMC4-202ENST00000455878 TCP10Q12799 353 aa16.62■□□□□ 0.25
PSMC4-202ENST00000455878 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
PSMC4-202ENST00000455878 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
PSMC4-202ENST00000455878 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
PSMC4-202ENST00000455878 USP40Q9NVE5 1235 aa16.61■□□□□ 0.25
PSMC4-202ENST00000455878 ECM2O94769 699 aaPredicted RBP16.6■□□□□ 0.25
PSMC4-202ENST00000455878 LDHBP07195 334 aaKnown RBP16.6■□□□□ 0.25
PSMC4-202ENST00000455878 TRIM27P14373 513 aa16.6■□□□□ 0.25
PSMC4-202ENST00000455878 CDC42EP5Q6NZY7 148 aa16.6■□□□□ 0.25
PSMC4-202ENST00000455878 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.6■□□□□ 0.25
PSMC4-202ENST00000455878 FBXO3Q9UK99 471 aa16.6■□□□□ 0.25
PSMC4-202ENST00000455878 PDHXO00330 501 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 FMNL1O95466 1100 aaPredicted RBP16.59■□□□□ 0.25
PSMC4-202ENST00000455878 UBTFL1P0CB47 393 aaPredicted RBP16.59■□□□□ 0.25
PSMC4-202ENST00000455878 INPP5BP32019 993 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 RFX5P48382 616 aaPredicted RBP16.59■□□□□ 0.25
PSMC4-202ENST00000455878 ATP2B3Q16720 1220 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 ZKSCAN2Q63HK3 967 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 ANKRD23Q86SG2 305 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 SH3TC2Q8TF17 1288 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 ARHGAP39Q9C0H5 1083 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 SIL1Q9H173 461 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 CPA4Q9UI42 421 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 BRCA2P51587 3418 aa16.59■□□□□ 0.25
PSMC4-202ENST00000455878 PSMC4P43686 418 aa16.58■□□□□ 0.24
PSMC4-202ENST00000455878 DIXDC1Q155Q3 683 aa16.58■□□□□ 0.24
PSMC4-202ENST00000455878 C17orf99Q6UX52 265 aa16.58■□□□□ 0.24
PSMC4-202ENST00000455878 ATG9AQ7Z3C6 839 aa16.58■□□□□ 0.24
PSMC4-202ENST00000455878 ZNF112Q9UJU3 913 aa16.58■□□□□ 0.24
PSMC4-202ENST00000455878 DENND2AQ9ULE3 1009 aa16.58■□□□□ 0.24
PSMC4-202ENST00000455878 LAMB1P07942 1786 aa16.58■□□□□ 0.24
PSMC4-202ENST00000455878 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
PSMC4-202ENST00000455878 CIAO1O76071 339 aa16.57■□□□□ 0.24
PSMC4-202ENST00000455878 C20orf194Q5TEA3 1177 aa16.57■□□□□ 0.24
PSMC4-202ENST00000455878 ZGPATQ8N5A5 531 aaKnown RBP16.57■□□□□ 0.24
PSMC4-202ENST00000455878 RAET1EQ8TD07 263 aa16.57■□□□□ 0.24
PSMC4-202ENST00000455878 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
PSMC4-202ENST00000455878 CLUAP1Q96AJ1 413 aa16.57■□□□□ 0.24
PSMC4-202ENST00000455878 API5Q9BZZ5 524 aaKnown RBP16.57■□□□□ 0.24
PSMC4-202ENST00000455878 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
PSMC4-202ENST00000455878 OTOFQ9HC10 1997 aa16.57■□□□□ 0.24
PSMC4-202ENST00000455878 RPAP1Q9BWH6 1393 aaPredicted RBP16.56■□□□□ 0.24
PSMC4-202ENST00000455878 CXCL11O14625 94 aa16.56■□□□□ 0.24
PSMC4-202ENST00000455878 SEMA3EO15041 775 aa16.56■□□□□ 0.24
PSMC4-202ENST00000455878 RLBP1P12271 317 aa16.56■□□□□ 0.24
PSMC4-202ENST00000455878 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
PSMC4-202ENST00000455878 SLF2Q8IX21 1173 aa16.56■□□□□ 0.24
PSMC4-202ENST00000455878 BIN2Q9UBW5 565 aaPredicted RBP16.56■□□□□ 0.24
PSMC4-202ENST00000455878 AK9Q5TCS8 1911 aa16.55■□□□□ 0.24
PSMC4-202ENST00000455878 PRDX5P30044 214 aa16.55■□□□□ 0.24
PSMC4-202ENST00000455878 NFIAQ12857 509 aa16.55■□□□□ 0.24
PSMC4-202ENST00000455878 FASTKD5Q7L8L6 764 aaKnown RBP16.55■□□□□ 0.24
PSMC4-202ENST00000455878 ZSCAN29Q8IWY8 852 aaPredicted RBP16.55■□□□□ 0.24
PSMC4-202ENST00000455878 PANK1Q8TE04 598 aa16.55■□□□□ 0.24
PSMC4-202ENST00000455878 TRIM47Q96LD4 638 aa16.55■□□□□ 0.24
PSMC4-202ENST00000455878 PICK1Q9NRD5 415 aa16.55■□□□□ 0.24
PSMC4-202ENST00000455878 SRRDQ9UH36 339 aa16.55■□□□□ 0.24
PSMC4-202ENST00000455878 KCNH4Q9UQ05 1017 aa16.55■□□□□ 0.24
PSMC4-202ENST00000455878 ARAP2Q8WZ64 1704 aa16.54■□□□□ 0.24
PSMC4-202ENST00000455878 NKX2-3Q8TAU0 364 aa16.54■□□□□ 0.24
PSMC4-202ENST00000455878 PARK7Q99497 189 aaKnown RBP16.54■□□□□ 0.24
PSMC4-202ENST00000455878 FAM198AQ9UFP1 575 aa16.54■□□□□ 0.24
PSMC4-202ENST00000455878 LRRFIP2Q9Y608 721 aaKnown RBP16.54■□□□□ 0.24
PSMC4-202ENST00000455878 ZHX2Q9Y6X8 837 aa16.54■□□□□ 0.24
PSMC4-202ENST00000455878 SALL1Q9NSC2 1324 aa16.54■□□□□ 0.24
PSMC4-202ENST00000455878 OSBPP22059 807 aa16.53■□□□□ 0.24
PSMC4-202ENST00000455878 GRK4P32298 578 aa16.53■□□□□ 0.24
PSMC4-202ENST00000455878 NOL9Q5SY16 702 aaKnown RBP16.53■□□□□ 0.24
PSMC4-202ENST00000455878 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms