RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 TNNI2P48788 182 aa30.53■■■□□ 2.48
MSH2-203ENST00000454849 MECOMQ03112 1051 aa30.53■■■□□ 2.48
MSH2-203ENST00000454849 SPTY2D1Q68D10 685 aaPredicted RBP30.53■■■□□ 2.48
MSH2-203ENST00000454849 ERC1Q8IUD2 1116 aa30.53■■■□□ 2.48
MSH2-203ENST00000454849 RHPN1Q8TCX5 695 aa30.53■■■□□ 2.48
MSH2-203ENST00000454849 BEGAINQ9BUH8 593 aa30.53■■■□□ 2.48
MSH2-203ENST00000454849 ZBTB22O15209 634 aa30.52■■■□□ 2.48
MSH2-203ENST00000454849 TCP10Q12799 353 aa30.52■■■□□ 2.48
MSH2-203ENST00000454849 CLMNQ96JQ2 1002 aa30.52■■■□□ 2.48
MSH2-203ENST00000454849 RAI14Q9P0K7 980 aa30.52■■■□□ 2.48
MSH2-203ENST00000454849 PPP1R12BO60237 982 aaPredicted RBP30.51■■■□□ 2.47
MSH2-203ENST00000454849 USP2O75604 605 aaPredicted RBP30.51■■■□□ 2.47
MSH2-203ENST00000454849 LBX1P52954 281 aa30.51■■■□□ 2.47
MSH2-203ENST00000454849 HSP90AB4PQ58FF6 505 aa30.51■■■□□ 2.47
MSH2-203ENST00000454849 ZNF384Q8TF68 577 aa30.51■■■□□ 2.47
MSH2-203ENST00000454849 NDUFB9Q9Y6M9 179 aa30.51■■■□□ 2.47
MSH2-203ENST00000454849 CTCFP49711 727 aaPredicted RBP30.5■■■□□ 2.47
MSH2-203ENST00000454849 NFIAQ12857 509 aa30.5■■■□□ 2.47
MSH2-203ENST00000454849 LDLRAD1Q5T700 205 aa30.5■■■□□ 2.47
MSH2-203ENST00000454849 THSD7BQ9C0I4 1608 aa30.5■■■□□ 2.47
MSH2-203ENST00000454849 ZAP70P43403 619 aa30.49■■■□□ 2.47
MSH2-203ENST00000454849 LRP2BPQ9P2M1 347 aa30.49■■■□□ 2.47
MSH2-203ENST00000454849 HSPA8P11142 646 aaKnown RBP30.48■■■□□ 2.47
MSH2-203ENST00000454849 CYP2E1P05181 493 aaPredicted RBP30.47■■■□□ 2.47
MSH2-203ENST00000454849 ZFPM1Q8IX07 1006 aa30.47■■■□□ 2.47
MSH2-203ENST00000454849 SLC10A4Q96EP9 437 aa30.47■■■□□ 2.47
MSH2-203ENST00000454849 CSRNP1Q96S65 589 aa30.47■■■□□ 2.47
MSH2-203ENST00000454849 MYH2Q9UKX2 1941 aa30.46■■■□□ 2.47
MSH2-203ENST00000454849 BTDP43251 543 aa30.46■■■□□ 2.47
MSH2-203ENST00000454849 NSUN4Q96CB9 384 aaKnown RBP30.46■■■□□ 2.47
MSH2-203ENST00000454849 KIF1BPQ96EK5 621 aa30.46■■■□□ 2.47
MSH2-203ENST00000454849 PIH1D3Q9NQM4 214 aaKnown RBP30.46■■■□□ 2.47
MSH2-203ENST00000454849 FAM198AQ9UFP1 575 aa30.46■■■□□ 2.47
MSH2-203ENST00000454849 GAKO14976 1311 aa30.46■■■□□ 2.47
MSH2-203ENST00000454849 IREB2P48200 963 aaKnown RBP30.45■■■□□ 2.47
MSH2-203ENST00000454849 MAP3K11Q16584 847 aa30.45■■■□□ 2.47
MSH2-203ENST00000454849 FKBP1CQ5VVH2 108 aa30.45■■■□□ 2.47
MSH2-203ENST00000454849 FAM83AQ86UY5 434 aa30.45■■■□□ 2.47
MSH2-203ENST00000454849 CRBNQ96SW2 442 aa30.45■■■□□ 2.47
MSH2-203ENST00000454849 MROH7-TTC4A0A0A0MT08 1334 aa30.45■■■□□ 2.46
MSH2-203ENST00000454849 MIGA2Q7L4E1 593 aa30.44■■■□□ 2.46
MSH2-203ENST00000454849 SLF2Q8IX21 1173 aa30.44■■■□□ 2.46
MSH2-203ENST00000454849 CLASRPQ8N2M8 674 aaKnown RBP30.44■■■□□ 2.46
MSH2-203ENST00000454849 SMARCA5O60264 1052 aaPredicted RBP30.43■■■□□ 2.46
MSH2-203ENST00000454849 RAB11FIP3O75154 756 aa30.43■■■□□ 2.46
MSH2-203ENST00000454849 FAM163AQ96GL9 167 aaPredicted RBP30.43■■■□□ 2.46
MSH2-203ENST00000454849 RGS3P49796 1198 aa30.42■■■□□ 2.46
MSH2-203ENST00000454849 FAM151AQ8WW52 585 aa30.42■■■□□ 2.46
MSH2-203ENST00000454849 ZNF512BQ96KM6 892 aaPredicted RBP30.42■■■□□ 2.46
MSH2-203ENST00000454849 ELP3Q9H9T3 547 aa30.42■■■□□ 2.46
MSH2-203ENST00000454849 PCDHB15Q9Y5E8 787 aa30.42■■■□□ 2.46
MSH2-203ENST00000454849 TRPA1O75762 1119 aa30.41■■■□□ 2.46
MSH2-203ENST00000454849 IFIT2P09913 472 aaKnown RBP30.41■■■□□ 2.46
MSH2-203ENST00000454849 GSTO1P78417 241 aa30.41■■■□□ 2.46
MSH2-203ENST00000454849 PICALMQ13492 652 aa30.41■■■□□ 2.46
MSH2-203ENST00000454849 SPRYD7Q5W111 196 aa30.41■■■□□ 2.46
MSH2-203ENST00000454849 AKAP11Q9UKA4 1901 aa30.41■■■□□ 2.46
MSH2-203ENST00000454849 GPR75-ASB3A0A0A6YYF3 556 aa30.4■■■□□ 2.46
MSH2-203ENST00000454849 ANTXR1Q9H6X2 564 aa30.4■■■□□ 2.46
MSH2-203ENST00000454849 DDX4Q9NQI0 724 aaKnown RBP30.4■■■□□ 2.46
MSH2-203ENST00000454849 LDHCP07864 332 aa30.39■■■□□ 2.46
MSH2-203ENST00000454849 NAA16Q6N069 864 aaPredicted RBP30.39■■■□□ 2.46
MSH2-203ENST00000454849 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.39■■■□□ 2.46
MSH2-203ENST00000454849 ANKRD13AQ8IZ07 590 aa30.39■■■□□ 2.46
MSH2-203ENST00000454849 CNKSR2Q8WXI2 1034 aa30.39■■■□□ 2.46
MSH2-203ENST00000454849 RNF186Q9NXI6 227 aa30.39■■■□□ 2.46
MSH2-203ENST00000454849 WDHD1O75717 1129 aaPredicted RBP30.38■■■□□ 2.45
MSH2-203ENST00000454849 GJA5P36382 358 aa30.38■■■□□ 2.45
MSH2-203ENST00000454849 RHBDL3P58872 404 aa30.38■■■□□ 2.45
MSH2-203ENST00000454849 WNK4Q96J92 1243 aa30.38■■■□□ 2.45
MSH2-203ENST00000454849 IDH1O75874 414 aaKnown RBP30.37■■■□□ 2.45
MSH2-203ENST00000454849 SLURP2P0DP57 97 aa30.37■■■□□ 2.45
MSH2-203ENST00000454849 MAP3K9P80192 1104 aa30.37■■■□□ 2.45
MSH2-203ENST00000454849 ADGRA1Q86SQ6 560 aa30.37■■■□□ 2.45
MSH2-203ENST00000454849 VGLL4Q14135 290 aa30.36■■■□□ 2.45
MSH2-203ENST00000454849 ZSCAN29Q8IWY8 852 aaPredicted RBP30.36■■■□□ 2.45
MSH2-203ENST00000454849 ZKSCAN4Q969J2 545 aaPredicted RBP30.36■■■□□ 2.45
MSH2-203ENST00000454849 WRNIP1Q96S55 665 aa30.36■■■□□ 2.45
MSH2-203ENST00000454849 IDI2Q9BXS1 227 aa30.36■■■□□ 2.45
MSH2-203ENST00000454849 PRDM10Q9NQV6 1147 aa30.36■■■□□ 2.45
MSH2-203ENST00000454849 SH3BP5LQ7L8J4 393 aa30.35■■■□□ 2.45
MSH2-203ENST00000454849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.35■■■□□ 2.45
MSH2-203ENST00000454849 SH3RF3Q8TEJ3 882 aaPredicted RBP30.35■■■□□ 2.45
MSH2-203ENST00000454849 LRRCC1Q9C099 1032 aa30.35■■■□□ 2.45
MSH2-203ENST00000454849 AATFQ9NY61 560 aaKnown RBP eCLIP30.35■■■□□ 2.45
MSH2-203ENST00000454849 MYO5AQ9Y4I1 1855 aaKnown RBP30.35■■■□□ 2.45
MSH2-203ENST00000454849 AK9Q5TCS8 1911 aa30.35■■■□□ 2.45
MSH2-203ENST00000454849 CA12O43570 354 aa30.34■■■□□ 2.45
MSH2-203ENST00000454849 TNS4Q8IZW8 715 aa30.34■■■□□ 2.45
MSH2-203ENST00000454849 OPTNQ96CV9 577 aa30.34■■■□□ 2.45
MSH2-203ENST00000454849 DNAJC2Q99543 621 aaKnown RBP30.34■■■□□ 2.45
MSH2-203ENST00000454849 DDTLA6NHG4 134 aaPredicted RBP30.33■■■□□ 2.45
MSH2-203ENST00000454849 DCAF15Q66K64 600 aa30.33■■■□□ 2.45
MSH2-203ENST00000454849 EDC3Q96F86 508 aaKnown RBP30.33■■■□□ 2.45
MSH2-203ENST00000454849 DCTPP1Q9H773 170 aa30.33■■■□□ 2.45
MSH2-203ENST00000454849 CSADQ9Y600 493 aa30.33■■■□□ 2.45
MSH2-203ENST00000454849 RPAP1Q9BWH6 1393 aaPredicted RBP30.32■■■□□ 2.44
MSH2-203ENST00000454849 ENTPD3O75355 529 aa30.32■■■□□ 2.44
MSH2-203ENST00000454849 CYP7A1P22680 504 aa30.32■■■□□ 2.44
MSH2-203ENST00000454849 INPP5BP32019 993 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms