RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
GTF3C2-206ENST00000454704 HSPD1P10809 573 aaKnown RBP12.36□□□□□ -0.43
GTF3C2-206ENST00000454704 CCDC73Q6ZRK6 1079 aa12.36□□□□□ -0.43
GTF3C2-206ENST00000454704 FERMT3Q86UX7 667 aa12.36□□□□□ -0.43
GTF3C2-206ENST00000454704 NBPF5PQ86XG9 351 aaPredicted RBP12.36□□□□□ -0.43
GTF3C2-206ENST00000454704 MASTLQ96GX5 879 aa12.36□□□□□ -0.43
GTF3C2-206ENST00000454704 AKAP11Q9UKA4 1901 aa12.36□□□□□ -0.43
GTF3C2-206ENST00000454704 DOCK2Q92608 1830 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 A0A1W2PQ27 194 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 A0A1W2PQ64 194 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 A0A1W2PQD8 194 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 E7EWF7 191 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 GOLIM4O00461 696 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 DDNO94850 711 aaPredicted RBP12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 STK3Q13188 491 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 TCIRG1Q13488 830 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 STX1AQ16623 288 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 IMMTQ16891 758 aaKnown RBP12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 CCDC57Q2TAC2 916 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 SOGA3Q5TF21 947 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 CHADLQ6NUI6 762 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 PLA2G4DQ86XP0 818 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 EDC3Q96F86 508 aaKnown RBP12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 NEUROD6Q96NK8 337 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 CHMP3Q9Y3E7 222 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 MAST3O60307 1309 aa12.35□□□□□ -0.43
GTF3C2-206ENST00000454704 YEATS4O95619 227 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 ANO6Q4KMQ2 910 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 BRAPQ7Z569 592 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 APPBP2Q92624 585 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 MRFAP1L1Q96HT8 127 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■□□ 16
GTF3C2-206ENST00000454704 CBX8Q9HC52 389 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 ANO10Q9NW15 660 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
GTF3C2-206ENST00000454704 NUP98P52948 1817 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 GOLGA6L19H0YKK7 550 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 JAK2O60674 1132 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 KINO60870 393 aaKnown RBP12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 CSF1RP07333 972 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 ZNF165P49910 485 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 FAM160A1Q05DH4 1040 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 SYCP1Q15431 976 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 TTC39AQ5SRH9 613 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 STOX1Q6ZVD7 989 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 TCEANC2Q96MN5 208 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 NAT10Q9H0A0 1025 aaKnown RBP12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 ZMYM6O95789 1325 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 LAMB2P55268 1798 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 SCN4AP35499 1836 aa12.33□□□□□ -0.44
GTF3C2-206ENST00000454704 NPR1P16066 1061 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 PDIA3P30101 505 aaKnown RBP12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 ADD1P35611 737 aaKnown RBP12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 ZNF75DP51815 510 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 OLFM4Q6UX06 510 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 CLEC4GQ6UXB4 293 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 CCDC129Q6ZRS4 1044 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 TTLL7Q6ZT98 887 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 KCNG4Q8TDN1 519 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 C7orf43Q8WVR3 580 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 SEC62Q99442 399 aaKnown RBP12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 TTC12Q9H892 705 aaPredicted RBP12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 RTEL1Q9NZ71 1219 aa12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 TFIP11Q9UBB9 837 aaKnown RBP12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 NIP7Q9Y221 180 aaKnown RBP eCLIP12.32□□□□□ -0.44
GTF3C2-206ENST00000454704 FAM177BA6PVY3 158 aa12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 NR1I2O75469 434 aa12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 GORABQ5T7V8 394 aa12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 ZBTB38Q8NAP3 1195 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 BPIFA3Q9BQP9 254 aa12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 ZNF277Q9NRM2 450 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 POLR3EQ9NVU0 708 aa12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 ECM29Q5VYK3 1845 aa12.31□□□□□ -0.44
GTF3C2-206ENST00000454704 IQCA1LA6NCM1 817 aa12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 CDKL5O76039 1030 aa12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 CTDNEP1O95476 244 aa12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 FKBP4Q02790 459 aaKnown RBP eCLIP12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 APOBRQ0VD83 1088 aa12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 LDHDQ86WU2 507 aa12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 CCAR1Q8IX12 1150 aaKnown RBP12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 CEP57L1Q8IYX8 460 aa12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 TRIM5Q9C035 493 aa12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 TAF1DQ9H5J8 278 aaPredicted RBP12.3□□□□□ -0.44
GTF3C2-206ENST00000454704 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
GTF3C2-206ENST00000454704 PASKQ96RG2 1323 aa12.29□□□□□ -0.44
GTF3C2-206ENST00000454704 KLRG2A4D1S0 409 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms