RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ZGPATQ8N5A5 531 aaKnown RBP11.93□□□□□ -0.5
USP54-207ENST00000451492 SSH3Q8TE77 659 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 SAGE1Q9NXZ1 904 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 EXOC6BQ9Y2D4 811 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 FOCADQ5VW36 1801 aa11.93□□□□□ -0.5
USP54-207ENST00000451492 DOCK1Q14185 1865 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 APBB1O00213 710 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 GJA5P36382 358 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 MCAMP43121 646 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 NFIAQ12857 509 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 PICALMQ13492 652 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 DGKZQ13574 1117 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 TNNI3KQ59H18 835 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 TBC1D9Q6ZT07 1266 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 OPTNQ96CV9 577 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 YTHDC1Q96MU7 727 aaKnown RBP11.92□□□□□ -0.5
USP54-207ENST00000451492 DBNDD2Q9BQY9 259 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 SNRKQ9NRH2 765 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 USP40Q9NVE5 1235 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
USP54-207ENST00000451492 HMG20BQ9P0W2 317 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 FPGT-TNNI3KV9GXZ4 949 aa11.92□□□□□ -0.5
USP54-207ENST00000451492 ARID4AP29374 1257 aaPredicted RBP11.91□□□□□ -0.5
USP54-207ENST00000451492 BTDP43251 543 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 VGLL4Q14135 290 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 MIGA2Q7L4E1 593 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
USP54-207ENST00000451492 SPATA5Q8NB90 893 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 ABHD8Q96I13 439 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 WRNIP1Q96S55 665 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 MCOLN1Q9GZU1 580 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
USP54-207ENST00000451492 RAI14Q9P0K7 980 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 CSADQ9Y600 493 aa11.91□□□□□ -0.5
USP54-207ENST00000451492 RPAP1Q9BWH6 1393 aaPredicted RBP11.91□□□□□ -0.5
USP54-207ENST00000451492 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
USP54-207ENST00000451492 MANSC4A6NHS7 340 aaPredicted RBP11.9□□□□□ -0.5
USP54-207ENST00000451492 ZBTB48P10074 688 aaPredicted RBP11.9□□□□□ -0.5
USP54-207ENST00000451492 MS4A1P11836 297 aa11.9□□□□□ -0.5
USP54-207ENST00000451492 MECOMQ03112 1051 aa11.9□□□□□ -0.5
USP54-207ENST00000451492 C20orf194Q5TEA3 1177 aa11.9□□□□□ -0.5
USP54-207ENST00000451492 SPTY2D1Q68D10 685 aaPredicted RBP11.9□□□□□ -0.5
USP54-207ENST00000451492 FAM83AQ86UY5 434 aa11.9□□□□□ -0.5
USP54-207ENST00000451492 ZKSCAN4Q969J2 545 aaPredicted RBP11.9□□□□□ -0.5
USP54-207ENST00000451492 MRIQ9BWK5 157 aa11.9□□□□□ -0.5
USP54-207ENST00000451492 ZSWIM8A7E2V4 1837 aa11.9□□□□□ -0.5
USP54-207ENST00000451492 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
USP54-207ENST00000451492 CCDC85CA6NKD9 419 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 IGF2BP3O00425 579 aaKnown RBP eCLIP11.89□□□□□ -0.51
USP54-207ENST00000451492 UQCRFS1P1P0C7P4 283 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 TM4SF4P48230 202 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 RGS3P49796 1198 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 CCDC158Q5M9N0 1113 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.89□□□□□ -0.51
USP54-207ENST00000451492 ZSCAN29Q8IWY8 852 aaPredicted RBP11.89□□□□□ -0.51
USP54-207ENST00000451492 ZFPM1Q8IX07 1006 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.51
USP54-207ENST00000451492 FAM151AQ8WW52 585 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 LRP2BPQ9P2M1 347 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 FAM198AQ9UFP1 575 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 NDUFB9Q9Y6M9 179 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 MYH1P12882 1939 aa11.89□□□□□ -0.51
USP54-207ENST00000451492 GAKO14976 1311 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 INPP5BP32019 993 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 FKBP1CQ5VVH2 108 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 DCAF15Q66K64 600 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 SLF2Q8IX21 1173 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 ZNF384Q8TF68 577 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 ZNF296Q8WUU4 475 aaPredicted RBP11.88□□□□□ -0.51
USP54-207ENST00000451492 ZNF341Q9BYN7 854 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 IL1RAPL2Q9NP60 686 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 GPR108Q9NPR9 543 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 DDX4Q9NQI0 724 aaKnown RBP11.88□□□□□ -0.51
USP54-207ENST00000451492 DBNLQ9UJU6 430 aaKnown RBP11.88□□□□□ -0.51
USP54-207ENST00000451492 SNCAIPQ9Y6H5 919 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 RFX7Q2KHR2 1363 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 PHIPQ8WWQ0 1821 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 PTPRFP10586 1907 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 MYH7P12883 1935 aa11.88□□□□□ -0.51
USP54-207ENST00000451492 NAV1Q8NEY1 1877 aa11.87□□□□□ -0.51
USP54-207ENST00000451492 SLURP2P0DP57 97 aa11.87□□□□□ -0.51
USP54-207ENST00000451492 ZAP70P43403 619 aa11.87□□□□□ -0.51
USP54-207ENST00000451492 AACSQ86V21 672 aa11.87□□□□□ -0.51
USP54-207ENST00000451492 NSUN4Q96CB9 384 aaKnown RBP11.87□□□□□ -0.51
USP54-207ENST00000451492 EAF2Q96CJ1 260 aaPredicted RBP11.87□□□□□ -0.51
USP54-207ENST00000451492 HOOK2Q96ED9 719 aa11.87□□□□□ -0.51
USP54-207ENST00000451492 NOP58Q9Y2X3 529 aaKnown RBP11.87□□□□□ -0.51
USP54-207ENST00000451492 CCL15-CCL14A0A0B4J2E2 113 aa11.86□□□□□ -0.51
USP54-207ENST00000451492 UNCXA6NJT0 531 aa11.86□□□□□ -0.51
USP54-207ENST00000451492 GPR25O00155 361 aa11.86□□□□□ -0.51
USP54-207ENST00000451492 GSTO1P78417 241 aa11.86□□□□□ -0.51
USP54-207ENST00000451492 CCL15Q16663 113 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms