RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 FAM155AB1AL88 458 aaPredicted RBP30.59■■■□□ 2.49
UFD1-204ENST00000447868 CCDC102AQ96A19 550 aa30.59■■■□□ 2.49
UFD1-204ENST00000447868 USP40Q9NVE5 1235 aa30.59■■■□□ 2.49
UFD1-204ENST00000447868 GAKO14976 1311 aa30.58■■■□□ 2.49
UFD1-204ENST00000447868 MAP2K2P36507 400 aa30.58■■■□□ 2.49
UFD1-204ENST00000447868 ZAP70P43403 619 aa30.58■■■□□ 2.49
UFD1-204ENST00000447868 TEPSINQ96N21 525 aa30.58■■■□□ 2.49
UFD1-204ENST00000447868 ZIC5Q96T25 663 aa30.58■■■□□ 2.49
UFD1-204ENST00000447868 PPP1R12BO60237 982 aaPredicted RBP30.57■■■□□ 2.48
UFD1-204ENST00000447868 SLC10A3P09131 477 aa30.57■■■□□ 2.48
UFD1-204ENST00000447868 IFIT2P09913 472 aaKnown RBP30.57■■■□□ 2.48
UFD1-204ENST00000447868 MAP2K1Q02750 393 aaPredicted RBP30.57■■■□□ 2.48
UFD1-204ENST00000447868 NOGQ13253 232 aa30.57■■■□□ 2.48
UFD1-204ENST00000447868 ZNF384Q8TF68 577 aa30.57■■■□□ 2.48
UFD1-204ENST00000447868 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.57■■■□□ 2.48
UFD1-204ENST00000447868 PCDHB15Q9Y5E8 787 aa30.57■■■□□ 2.48
UFD1-204ENST00000447868 MROH7-TTC4A0A0A0MT08 1334 aa30.56■■■□□ 2.48
UFD1-204ENST00000447868 CYP2E1P05181 493 aaPredicted RBP30.56■■■□□ 2.48
UFD1-204ENST00000447868 FKBP1CQ5VVH2 108 aa30.56■■■□□ 2.48
UFD1-204ENST00000447868 RASAL3Q86YV0 1011 aa30.56■■■□□ 2.48
UFD1-204ENST00000447868 AIDAQ96BJ3 306 aa30.56■■■□□ 2.48
UFD1-204ENST00000447868 NSUN4Q96CB9 384 aaKnown RBP30.56■■■□□ 2.48
UFD1-204ENST00000447868 WBP1LQ9NX94 342 aa30.56■■■□□ 2.48
UFD1-204ENST00000447868 BTDP43251 543 aa30.55■■■□□ 2.48
UFD1-204ENST00000447868 GSTO1P78417 241 aa30.55■■■□□ 2.48
UFD1-204ENST00000447868 FAM83AQ86UY5 434 aa30.55■■■□□ 2.48
UFD1-204ENST00000447868 NDUFB9Q9Y6M9 179 aa30.55■■■□□ 2.48
UFD1-204ENST00000447868 TCP10Q12799 353 aa30.54■■■□□ 2.48
UFD1-204ENST00000447868 NFIAQ12857 509 aa30.54■■■□□ 2.48
UFD1-204ENST00000447868 FAM163AQ96GL9 167 aaPredicted RBP30.54■■■□□ 2.48
UFD1-204ENST00000447868 LRRCC1Q9C099 1032 aa30.54■■■□□ 2.48
UFD1-204ENST00000447868 MYO5AQ9Y4I1 1855 aaKnown RBP30.53■■■□□ 2.48
UFD1-204ENST00000447868 SMARCA5O60264 1052 aaPredicted RBP30.53■■■□□ 2.48
UFD1-204ENST00000447868 PIH1D3Q9NQM4 214 aaKnown RBP30.53■■■□□ 2.48
UFD1-204ENST00000447868 FOXN1O15353 648 aa30.52■■■□□ 2.48
UFD1-204ENST00000447868 USP2O75604 605 aaPredicted RBP30.52■■■□□ 2.48
UFD1-204ENST00000447868 LDHCP07864 332 aa30.52■■■□□ 2.48
UFD1-204ENST00000447868 KIF23Q02241 960 aaPredicted RBP30.52■■■□□ 2.48
UFD1-204ENST00000447868 MAP3K11Q16584 847 aa30.52■■■□□ 2.48
UFD1-204ENST00000447868 LDLRAD1Q5T700 205 aa30.52■■■□□ 2.48
UFD1-204ENST00000447868 DCTPP1Q9H773 170 aa30.52■■■□□ 2.48
UFD1-204ENST00000447868 IREB2P48200 963 aaKnown RBP30.51■■■□□ 2.47
UFD1-204ENST00000447868 FAM151AQ8WW52 585 aa30.51■■■□□ 2.47
UFD1-204ENST00000447868 BEGAINQ9BUH8 593 aa30.51■■■□□ 2.47
UFD1-204ENST00000447868 FAM198AQ9UFP1 575 aa30.51■■■□□ 2.47
UFD1-204ENST00000447868 MAST2Q6P0Q8 1798 aa30.51■■■□□ 2.47
UFD1-204ENST00000447868 GPR75-ASB3A0A0A6YYF3 556 aa30.5■■■□□ 2.47
UFD1-204ENST00000447868 NAA16Q6N069 864 aaPredicted RBP30.5■■■□□ 2.47
UFD1-204ENST00000447868 CLMNQ96JQ2 1002 aa30.5■■■□□ 2.47
UFD1-204ENST00000447868 AK9Q5TCS8 1911 aa30.49■■■□□ 2.47
UFD1-204ENST00000447868 MKRN3Q13064 507 aaKnown RBP30.49■■■□□ 2.47
UFD1-204ENST00000447868 SUPT16HQ9Y5B9 1047 aaKnown RBP30.49■■■□□ 2.47
UFD1-204ENST00000447868 RGS3P49796 1198 aa30.48■■■□□ 2.47
UFD1-204ENST00000447868 SLC10A4Q96EP9 437 aa30.48■■■□□ 2.47
UFD1-204ENST00000447868 ANTXR1Q9H6X2 564 aa30.48■■■□□ 2.47
UFD1-204ENST00000447868 RPAP1Q9BWH6 1393 aaPredicted RBP30.48■■■□□ 2.47
UFD1-204ENST00000447868 IDH1O75874 414 aaKnown RBP30.47■■■□□ 2.47
UFD1-204ENST00000447868 ZFPM1Q8IX07 1006 aa30.47■■■□□ 2.47
UFD1-204ENST00000447868 IDI2Q9BXS1 227 aa30.47■■■□□ 2.47
UFD1-204ENST00000447868 RHBDL3P58872 404 aa30.46■■■□□ 2.47
UFD1-204ENST00000447868 PICALMQ13492 652 aa30.46■■■□□ 2.47
UFD1-204ENST00000447868 NOL10Q9BSC4 688 aaKnown RBP30.46■■■□□ 2.47
UFD1-204ENST00000447868 OTOFQ9HC10 1997 aa30.46■■■□□ 2.47
UFD1-204ENST00000447868 WDHD1O75717 1129 aaPredicted RBP30.45■■■□□ 2.47
UFD1-204ENST00000447868 CTCFP49711 727 aaPredicted RBP30.45■■■□□ 2.47
UFD1-204ENST00000447868 MIGA2Q7L4E1 593 aa30.45■■■□□ 2.47
UFD1-204ENST00000447868 ANKRD13AQ8IZ07 590 aa30.45■■■□□ 2.47
UFD1-204ENST00000447868 HOOK2Q96ED9 719 aa30.45■■■□□ 2.47
UFD1-204ENST00000447868 DNAJC2Q99543 621 aaKnown RBP30.45■■■□□ 2.47
UFD1-204ENST00000447868 RFX7Q2KHR2 1363 aa30.44■■■□□ 2.46
UFD1-204ENST00000447868 ADGRA1Q86SQ6 560 aa30.44■■■□□ 2.46
UFD1-204ENST00000447868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.44■■■□□ 2.46
UFD1-204ENST00000447868 CSRNP1Q96S65 589 aa30.44■■■□□ 2.46
UFD1-204ENST00000447868 DDX4Q9NQI0 724 aaKnown RBP30.44■■■□□ 2.46
UFD1-204ENST00000447868 AATFQ9NY61 560 aaKnown RBP eCLIP30.44■■■□□ 2.46
UFD1-204ENST00000447868 ENTPD3O75355 529 aa30.43■■■□□ 2.46
UFD1-204ENST00000447868 TSKSQ9UJT2 592 aa30.43■■■□□ 2.46
UFD1-204ENST00000447868 DOCK2Q92608 1830 aa30.43■■■□□ 2.46
UFD1-204ENST00000447868 UNCXA6NJT0 531 aa30.42■■■□□ 2.46
UFD1-204ENST00000447868 CYP7A1P22680 504 aa30.42■■■□□ 2.46
UFD1-204ENST00000447868 SPRYD7Q5W111 196 aa30.42■■■□□ 2.46
UFD1-204ENST00000447868 DCAF15Q66K64 600 aa30.42■■■□□ 2.46
UFD1-204ENST00000447868 ZSCAN29Q8IWY8 852 aaPredicted RBP30.42■■■□□ 2.46
UFD1-204ENST00000447868 SH3RF3Q8TEJ3 882 aaPredicted RBP30.42■■■□□ 2.46
UFD1-204ENST00000447868 BOLA2Q9H3K6 86 aa30.42■■■□□ 2.46
UFD1-204ENST00000447868 ELP3Q9H9T3 547 aa30.42■■■□□ 2.46
UFD1-204ENST00000447868 GOLIM4O00461 696 aa30.41■■■□□ 2.46
UFD1-204ENST00000447868 BAG3O95817 575 aa30.41■■■□□ 2.46
UFD1-204ENST00000447868 MAP3K9P80192 1104 aa30.41■■■□□ 2.46
UFD1-204ENST00000447868 MAP3K12Q12852 859 aa30.41■■■□□ 2.46
UFD1-204ENST00000447868 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.41■■■□□ 2.46
UFD1-204ENST00000447868 TEX11Q8IYF3 940 aa30.41■■■□□ 2.46
UFD1-204ENST00000447868 MAGEB6Q8N7X4 407 aa30.41■■■□□ 2.46
UFD1-204ENST00000447868 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.41■■■□□ 2.46
UFD1-204ENST00000447868 EXOC6Q8TAG9 804 aa30.41■■■□□ 2.46
UFD1-204ENST00000447868 IGSF3O75054 1194 aa30.4■■■□□ 2.46
UFD1-204ENST00000447868 HSPA8P11142 646 aaKnown RBP30.4■■■□□ 2.46
UFD1-204ENST00000447868 ATP5JP18859 108 aa30.4■■■□□ 2.46
UFD1-204ENST00000447868 LBX1P52954 281 aa30.4■■■□□ 2.46
UFD1-204ENST00000447868 TTF1Q15361 905 aaPredicted RBP30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms