RNA–Protein interactions for RNA: ENST00000447698.5

STRADB-204, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 4

Gene STRADB, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-204ENST00000447698 ERICH6Q7L0X2 663 aa28.66■■■□□ 2.18
STRADB-204ENST00000447698 AACSQ86V21 672 aa28.65■■■□□ 2.18
STRADB-204ENST00000447698 PPP1R12BO60237 982 aaPredicted RBP28.64■■■□□ 2.18
STRADB-204ENST00000447698 KIF23Q02241 960 aaPredicted RBP28.64■■■□□ 2.18
STRADB-204ENST00000447698 MECOMQ03112 1051 aa28.64■■■□□ 2.18
STRADB-204ENST00000447698 LDLRAD1Q5T700 205 aa28.64■■■□□ 2.18
STRADB-204ENST00000447698 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.64■■■□□ 2.18
STRADB-204ENST00000447698 FKBP1CQ5VVH2 108 aa28.63■■■□□ 2.17
STRADB-204ENST00000447698 ZNF384Q8TF68 577 aa28.63■■■□□ 2.17
STRADB-204ENST00000447698 BCL11AQ9H165 835 aa28.63■■■□□ 2.17
STRADB-204ENST00000447698 USP40Q9NVE5 1235 aa28.63■■■□□ 2.17
STRADB-204ENST00000447698 GAKO14976 1311 aa28.63■■■□□ 2.17
STRADB-204ENST00000447698 USP2O75604 605 aaPredicted RBP28.62■■■□□ 2.17
STRADB-204ENST00000447698 MAP3K11Q16584 847 aa28.62■■■□□ 2.17
STRADB-204ENST00000447698 KIF1BPQ96EK5 621 aa28.62■■■□□ 2.17
STRADB-204ENST00000447698 ZNF512BQ96KM6 892 aaPredicted RBP28.62■■■□□ 2.17
STRADB-204ENST00000447698 BEGAINQ9BUH8 593 aa28.62■■■□□ 2.17
STRADB-204ENST00000447698 CTCFP49711 727 aaPredicted RBP28.61■■■□□ 2.17
STRADB-204ENST00000447698 FAM83AQ86UY5 434 aa28.61■■■□□ 2.17
STRADB-204ENST00000447698 RAI14Q9P0K7 980 aa28.61■■■□□ 2.17
STRADB-204ENST00000447698 MYO5AQ9Y4I1 1855 aaKnown RBP28.61■■■□□ 2.17
STRADB-204ENST00000447698 ZAP70P43403 619 aa28.6■■■□□ 2.17
STRADB-204ENST00000447698 TCP10Q12799 353 aa28.6■■■□□ 2.17
STRADB-204ENST00000447698 NFIAQ12857 509 aa28.6■■■□□ 2.17
STRADB-204ENST00000447698 COL13A1Q5TAT6 717 aaPredicted RBP28.6■■■□□ 2.17
STRADB-204ENST00000447698 SLF2Q8IX21 1173 aa28.6■■■□□ 2.17
STRADB-204ENST00000447698 NSUN4Q96CB9 384 aaKnown RBP28.6■■■□□ 2.17
STRADB-204ENST00000447698 FAM163AQ96GL9 167 aaPredicted RBP28.6■■■□□ 2.17
STRADB-204ENST00000447698 CLMNQ96JQ2 1002 aa28.6■■■□□ 2.17
STRADB-204ENST00000447698 LRP2BPQ9P2M1 347 aa28.6■■■□□ 2.17
STRADB-204ENST00000447698 AK9Q5TCS8 1911 aa28.6■■■□□ 2.17
STRADB-204ENST00000447698 RAB11FIP3O75154 756 aa28.59■■■□□ 2.17
STRADB-204ENST00000447698 CYP2E1P05181 493 aaPredicted RBP28.59■■■□□ 2.17
STRADB-204ENST00000447698 IREB2P48200 963 aaKnown RBP28.59■■■□□ 2.17
STRADB-204ENST00000447698 MKRN3Q13064 507 aaKnown RBP28.59■■■□□ 2.17
STRADB-204ENST00000447698 TSKSQ9UJT2 592 aa28.59■■■□□ 2.17
STRADB-204ENST00000447698 MROH7-TTC4A0A0A0MT08 1334 aa28.59■■■□□ 2.17
STRADB-204ENST00000447698 HSPA8P11142 646 aaKnown RBP28.58■■■□□ 2.17
STRADB-204ENST00000447698 BTDP43251 543 aa28.58■■■□□ 2.17
STRADB-204ENST00000447698 LBX1P52954 281 aa28.58■■■□□ 2.17
STRADB-204ENST00000447698 CLASRPQ8N2M8 674 aaKnown RBP28.58■■■□□ 2.17
STRADB-204ENST00000447698 CSRNP1Q96S65 589 aa28.58■■■□□ 2.17
STRADB-204ENST00000447698 FAM198AQ9UFP1 575 aa28.58■■■□□ 2.17
STRADB-204ENST00000447698 SLC10A4Q96EP9 437 aa28.57■■■□□ 2.16
STRADB-204ENST00000447698 NDUFB9Q9Y6M9 179 aa28.57■■■□□ 2.16
STRADB-204ENST00000447698 GSTO1P78417 241 aa28.56■■■□□ 2.16
STRADB-204ENST00000447698 FAM151AQ8WW52 585 aa28.56■■■□□ 2.16
STRADB-204ENST00000447698 CRBNQ96SW2 442 aa28.56■■■□□ 2.16
STRADB-204ENST00000447698 PIH1D3Q9NQM4 214 aaKnown RBP28.56■■■□□ 2.16
STRADB-204ENST00000447698 OTOFQ9HC10 1997 aa28.55■■■□□ 2.16
STRADB-204ENST00000447698 GPR75-ASB3A0A0A6YYF3 556 aa28.55■■■□□ 2.16
STRADB-204ENST00000447698 LDHCP07864 332 aa28.55■■■□□ 2.16
STRADB-204ENST00000447698 ZFPM1Q8IX07 1006 aa28.55■■■□□ 2.16
STRADB-204ENST00000447698 IFIT2P09913 472 aaKnown RBP28.54■■■□□ 2.16
STRADB-204ENST00000447698 PCDHB15Q9Y5E8 787 aa28.54■■■□□ 2.16
STRADB-204ENST00000447698 RPAP1Q9BWH6 1393 aaPredicted RBP28.53■■■□□ 2.16
STRADB-204ENST00000447698 RGS3P49796 1198 aa28.53■■■□□ 2.16
STRADB-204ENST00000447698 SPRYD7Q5W111 196 aa28.53■■■□□ 2.16
STRADB-204ENST00000447698 ANKRD13AQ8IZ07 590 aa28.53■■■□□ 2.16
STRADB-204ENST00000447698 IDI2Q9BXS1 227 aa28.53■■■□□ 2.16
STRADB-204ENST00000447698 WDHD1O75717 1129 aaPredicted RBP28.52■■■□□ 2.16
STRADB-204ENST00000447698 RHBDL3P58872 404 aa28.52■■■□□ 2.16
STRADB-204ENST00000447698 MIGA2Q7L4E1 593 aa28.52■■■□□ 2.16
STRADB-204ENST00000447698 UNCXA6NJT0 531 aa28.51■■■□□ 2.15
STRADB-204ENST00000447698 CA12O43570 354 aa28.51■■■□□ 2.15
STRADB-204ENST00000447698 SMARCA5O60264 1052 aaPredicted RBP28.51■■■□□ 2.15
STRADB-204ENST00000447698 NAA16Q6N069 864 aaPredicted RBP28.51■■■□□ 2.15
STRADB-204ENST00000447698 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.51■■■□□ 2.15
STRADB-204ENST00000447698 WNK4Q96J92 1243 aa28.51■■■□□ 2.15
STRADB-204ENST00000447698 ANTXR1Q9H6X2 564 aa28.51■■■□□ 2.15
STRADB-204ENST00000447698 DDX4Q9NQI0 724 aaKnown RBP28.51■■■□□ 2.15
STRADB-204ENST00000447698 PRDM10Q9NQV6 1147 aa28.51■■■□□ 2.15
STRADB-204ENST00000447698 RFX7Q2KHR2 1363 aa28.5■■■□□ 2.15
STRADB-204ENST00000447698 MAP3K9P80192 1104 aa28.5■■■□□ 2.15
STRADB-204ENST00000447698 PICALMQ13492 652 aa28.5■■■□□ 2.15
STRADB-204ENST00000447698 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.5■■■□□ 2.15
STRADB-204ENST00000447698 LRRCC1Q9C099 1032 aa28.5■■■□□ 2.15
STRADB-204ENST00000447698 ELP3Q9H9T3 547 aa28.5■■■□□ 2.15
STRADB-204ENST00000447698 RNF186Q9NXI6 227 aa28.5■■■□□ 2.15
STRADB-204ENST00000447698 MAST2Q6P0Q8 1798 aa28.5■■■□□ 2.15
STRADB-204ENST00000447698 TRPA1O75762 1119 aa28.49■■■□□ 2.15
STRADB-204ENST00000447698 HOOK2Q96ED9 719 aa28.49■■■□□ 2.15
STRADB-204ENST00000447698 DCTPP1Q9H773 170 aa28.49■■■□□ 2.15
STRADB-204ENST00000447698 ENTPD3O75355 529 aa28.48■■■□□ 2.15
STRADB-204ENST00000447698 IDH1O75874 414 aaKnown RBP28.48■■■□□ 2.15
STRADB-204ENST00000447698 GJA5P36382 358 aa28.48■■■□□ 2.15
STRADB-204ENST00000447698 VGLL4Q14135 290 aa28.48■■■□□ 2.15
STRADB-204ENST00000447698 DCAF15Q66K64 600 aa28.48■■■□□ 2.15
STRADB-204ENST00000447698 SH3BP5LQ7L8J4 393 aa28.48■■■□□ 2.15
STRADB-204ENST00000447698 ADGRA1Q86SQ6 560 aa28.48■■■□□ 2.15
STRADB-204ENST00000447698 REM2Q8IYK8 340 aaPredicted RBP28.48■■■□□ 2.15
STRADB-204ENST00000447698 WRNIP1Q96S55 665 aa28.47■■■□□ 2.15
STRADB-204ENST00000447698 AATFQ9NY61 560 aaKnown RBP eCLIP28.47■■■□□ 2.15
STRADB-204ENST00000447698 CASP8AP2Q9UKL3 1982 aa28.47■■■□□ 2.15
STRADB-204ENST00000447698 TM4SF4P48230 202 aa28.46■■■□□ 2.15
STRADB-204ENST00000447698 ZSCAN29Q8IWY8 852 aaPredicted RBP28.46■■■□□ 2.15
STRADB-204ENST00000447698 SH3RF3Q8TEJ3 882 aaPredicted RBP28.46■■■□□ 2.15
STRADB-204ENST00000447698 CNKSR2Q8WXI2 1034 aa28.46■■■□□ 2.15
STRADB-204ENST00000447698 ZNF341Q9BYN7 854 aa28.46■■■□□ 2.15
STRADB-204ENST00000447698 CSADQ9Y600 493 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms