RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.54■■■□□ 2.32
MRPL28-205ENST00000447696 COG6Q9Y2V7 657 aa29.54■■■□□ 2.32
MRPL28-205ENST00000447696 FPGT-TNNI3KV9GXZ4 949 aa29.54■■■□□ 2.32
MRPL28-205ENST00000447696 UQCRFS1P1P0C7P4 283 aa29.53■■■□□ 2.32
MRPL28-205ENST00000447696 TMEM39BQ9GZU3 492 aa29.53■■■□□ 2.32
MRPL28-205ENST00000447696 RPAP1Q9BWH6 1393 aaPredicted RBP29.52■■■□□ 2.32
MRPL28-205ENST00000447696 CACNB3P54284 484 aa29.52■■■□□ 2.32
MRPL28-205ENST00000447696 PDE3AQ14432 1141 aa29.52■■■□□ 2.32
MRPL28-205ENST00000447696 ZBTB40Q9NUA8 1239 aa29.52■■■□□ 2.32
MRPL28-205ENST00000447696 HMG20BQ9P0W2 317 aa29.52■■■□□ 2.32
MRPL28-205ENST00000447696 FZD1Q9UP38 647 aa29.52■■■□□ 2.32
MRPL28-205ENST00000447696 USP2O75604 605 aaPredicted RBP29.51■■■□□ 2.31
MRPL28-205ENST00000447696 SLF2Q8IX21 1173 aa29.51■■■□□ 2.31
MRPL28-205ENST00000447696 SPATA5Q8NB90 893 aa29.51■■■□□ 2.31
MRPL28-205ENST00000447696 ABCF2Q9UG63 623 aa29.51■■■□□ 2.31
MRPL28-205ENST00000447696 GAKO14976 1311 aa29.5■■■□□ 2.31
MRPL28-205ENST00000447696 DZIP1Q86YF9 867 aaKnown RBP29.5■■■□□ 2.31
MRPL28-205ENST00000447696 RPAP2Q8IXW5 612 aaPredicted RBP29.5■■■□□ 2.31
MRPL28-205ENST00000447696 SPRYD7Q5W111 196 aa29.49■■■□□ 2.31
MRPL28-205ENST00000447696 CDC42EP5Q6NZY7 148 aa29.49■■■□□ 2.31
MRPL28-205ENST00000447696 ERC1Q8IUD2 1116 aa29.49■■■□□ 2.31
MRPL28-205ENST00000447696 CDAN1Q8IWY9 1227 aa29.49■■■□□ 2.31
MRPL28-205ENST00000447696 ANKRD13AQ8IZ07 590 aa29.49■■■□□ 2.31
MRPL28-205ENST00000447696 HOOK2Q96ED9 719 aa29.49■■■□□ 2.31
MRPL28-205ENST00000447696 SLC10A4Q96EP9 437 aa29.49■■■□□ 2.31
MRPL28-205ENST00000447696 FAM163AQ96GL9 167 aaPredicted RBP29.49■■■□□ 2.31
MRPL28-205ENST00000447696 HSP90AB4PQ58FF6 505 aa29.48■■■□□ 2.31
MRPL28-205ENST00000447696 CCDC158Q5M9N0 1113 aa29.48■■■□□ 2.31
MRPL28-205ENST00000447696 DBNDD2Q9BQY9 259 aa29.48■■■□□ 2.31
MRPL28-205ENST00000447696 ZBTB48P10074 688 aaPredicted RBP29.47■■■□□ 2.31
MRPL28-205ENST00000447696 MCAMP43121 646 aa29.47■■■□□ 2.31
MRPL28-205ENST00000447696 ERICH6Q7L0X2 663 aa29.47■■■□□ 2.31
MRPL28-205ENST00000447696 CLMNQ96JQ2 1002 aa29.47■■■□□ 2.31
MRPL28-205ENST00000447696 ZNF512BQ96KM6 892 aaPredicted RBP29.47■■■□□ 2.31
MRPL28-205ENST00000447696 HPS5Q9UPZ3 1129 aa29.47■■■□□ 2.31
MRPL28-205ENST00000447696 HMMRO75330 724 aa29.46■■■□□ 2.31
MRPL28-205ENST00000447696 SREBF2Q12772 1141 aa29.46■■■□□ 2.31
MRPL28-205ENST00000447696 NOM1Q5C9Z4 860 aaKnown RBP29.46■■■□□ 2.31
MRPL28-205ENST00000447696 PI16Q6UXB8 463 aa29.46■■■□□ 2.31
MRPL28-205ENST00000447696 FAM151AQ8WW52 585 aa29.46■■■□□ 2.31
MRPL28-205ENST00000447696 TM4SF4P48230 202 aa29.45■■■□□ 2.31
MRPL28-205ENST00000447696 TTC39AQ5SRH9 613 aa29.45■■■□□ 2.31
MRPL28-205ENST00000447696 USP40Q9NVE5 1235 aa29.45■■■□□ 2.31
MRPL28-205ENST00000447696 MECOMQ03112 1051 aa29.44■■■□□ 2.3
MRPL28-205ENST00000447696 WNK4Q96J92 1243 aa29.44■■■□□ 2.3
MRPL28-205ENST00000447696 DBNLQ9UJU6 430 aaKnown RBP29.44■■■□□ 2.3
MRPL28-205ENST00000447696 EXOC6BQ9Y2D4 811 aa29.44■■■□□ 2.3
MRPL28-205ENST00000447696 MROH7-TTC4A0A0A0MT08 1334 aa29.44■■■□□ 2.3
MRPL28-205ENST00000447696 MYH2Q9UKX2 1941 aa29.43■■■□□ 2.3
MRPL28-205ENST00000447696 GSTO1P78417 241 aa29.43■■■□□ 2.3
MRPL28-205ENST00000447696 MKRN3Q13064 507 aaKnown RBP29.43■■■□□ 2.3
MRPL28-205ENST00000447696 C20orf194Q5TEA3 1177 aa29.43■■■□□ 2.3
MRPL28-205ENST00000447696 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.43■■■□□ 2.31e-7■■□□□ 12.6
MRPL28-205ENST00000447696 OTOFQ9HC10 1997 aa29.43■■■□□ 2.3
MRPL28-205ENST00000447696 DCAF15Q66K64 600 aa29.42■■■□□ 2.3
MRPL28-205ENST00000447696 EAF2Q96CJ1 260 aaPredicted RBP29.42■■■□□ 2.3
MRPL28-205ENST00000447696 IDI2Q9BXS1 227 aa29.42■■■□□ 2.3
MRPL28-205ENST00000447696 RFX7Q2KHR2 1363 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 MANSC4A6NHS7 340 aaPredicted RBP29.41■■■□□ 2.3
MRPL28-205ENST00000447696 IGSF3O75054 1194 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 LDHCP07864 332 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 INHBEP58166 350 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 MAP3K9P80192 1104 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 NFIAQ12857 509 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 TBC1D9Q6ZT07 1266 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 SIRT2Q8IXJ6 389 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 FAM198AQ9UFP1 575 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 LAMB1P07942 1786 aa29.41■■■□□ 2.3
MRPL28-205ENST00000447696 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.4■■■□□ 2.3
MRPL28-205ENST00000447696 ZNF384Q8TF68 577 aa29.4■■■□□ 2.3
MRPL28-205ENST00000447696 ZNF296Q8WUU4 475 aaPredicted RBP29.4■■■□□ 2.3
MRPL28-205ENST00000447696 NSUN4Q96CB9 384 aaKnown RBP29.4■■■□□ 2.3
MRPL28-205ENST00000447696 GPR75-ASB3A0A0A6YYF3 556 aa29.39■■■□□ 2.3
MRPL28-205ENST00000447696 ENTPD3O75355 529 aa29.39■■■□□ 2.3
MRPL28-205ENST00000447696 MAP4K4O95819 1239 aaPredicted RBP29.39■■■□□ 2.3
MRPL28-205ENST00000447696 BTDP43251 543 aa29.39■■■□□ 2.3
MRPL28-205ENST00000447696 CCDC8Q9H0W5 538 aaPredicted RBP29.39■■■□□ 2.3
MRPL28-205ENST00000447696 TLR7Q9NYK1 1049 aaKnown RBP29.39■■■□□ 2.3
MRPL28-205ENST00000447696 RAI14Q9P0K7 980 aa29.39■■■□□ 2.3
MRPL28-205ENST00000447696 LRP2BPQ9P2M1 347 aa29.39■■■□□ 2.3
MRPL28-205ENST00000447696 CSADQ9Y600 493 aa29.39■■■□□ 2.3
MRPL28-205ENST00000447696 TCP10Q12799 353 aa29.38■■■□□ 2.29
MRPL28-205ENST00000447696 VGLL4Q14135 290 aa29.38■■■□□ 2.29
MRPL28-205ENST00000447696 RHPN1Q8TCX5 695 aa29.38■■■□□ 2.29
MRPL28-205ENST00000447696 GCC1Q96CN9 775 aa29.38■■■□□ 2.29
MRPL28-205ENST00000447696 ELP3Q9H9T3 547 aa29.38■■■□□ 2.29
MRPL28-205ENST00000447696 FBXO46Q6PJ61 603 aaPredicted RBP29.37■■■□□ 2.29
MRPL28-205ENST00000447696 AACSQ86V21 672 aa29.37■■■□□ 2.29
MRPL28-205ENST00000447696 KIF1BPQ96EK5 621 aa29.37■■■□□ 2.29
MRPL28-205ENST00000447696 ZNF341Q9BYN7 854 aa29.37■■■□□ 2.29
MRPL28-205ENST00000447696 SNRKQ9NRH2 765 aa29.37■■■□□ 2.29
MRPL28-205ENST00000447696 ALDH1A1P00352 501 aa29.36■■■□□ 2.29
MRPL28-205ENST00000447696 GJA5P36382 358 aa29.36■■■□□ 2.29
MRPL28-205ENST00000447696 RGS3P49796 1198 aa29.36■■■□□ 2.29
MRPL28-205ENST00000447696 OPTNQ96CV9 577 aa29.36■■■□□ 2.29
MRPL28-205ENST00000447696 WRNIP1Q96S55 665 aa29.36■■■□□ 2.29
MRPL28-205ENST00000447696 CFHR5Q9BXR6 569 aa29.36■■■□□ 2.29
MRPL28-205ENST00000447696 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.36■■■□□ 2.29
MRPL28-205ENST00000447696 MAST2Q6P0Q8 1798 aa29.35■■■□□ 2.29
MRPL28-205ENST00000447696 GPR25O00155 361 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms