RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 MRPL50Q8N5N7 158 aaKnown RBP30.54■■■□□ 2.48
PMS1-214ENST00000446877 WDR66Q8TBY9 1149 aa30.54■■■□□ 2.48
PMS1-214ENST00000446877 PTPRCP08575 1304 aa30.52■■■□□ 2.48
PMS1-214ENST00000446877 RBBP6Q7Z6E9 1792 aaKnown RBP30.52■■■□□ 2.48
PMS1-214ENST00000446877 SLC5A1P13866 664 aa30.52■■■□□ 2.48
PMS1-214ENST00000446877 FGFR2P21802 821 aa30.52■■■□□ 2.48
PMS1-214ENST00000446877 FAM151AQ8WW52 585 aa30.52■■■□□ 2.48
PMS1-214ENST00000446877 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.51■■■□□ 2.47
PMS1-214ENST00000446877 RPAP1Q9BWH6 1393 aaPredicted RBP30.51■■■□□ 2.47
PMS1-214ENST00000446877 ARAP2Q8WZ64 1704 aa30.5■■■□□ 2.47
PMS1-214ENST00000446877 ECM2O94769 699 aaPredicted RBP30.5■■■□□ 2.47
PMS1-214ENST00000446877 INPP5BP32019 993 aa30.5■■■□□ 2.47
PMS1-214ENST00000446877 C17orf99Q6UX52 265 aa30.5■■■□□ 2.47
PMS1-214ENST00000446877 LPIN2Q92539 896 aa30.5■■■□□ 2.47
PMS1-214ENST00000446877 USP44Q9H0E7 712 aa30.5■■■□□ 2.47
PMS1-214ENST00000446877 EYA2O00167 538 aa30.49■■■□□ 2.47
PMS1-214ENST00000446877 HOXD10P28358 340 aa30.49■■■□□ 2.47
PMS1-214ENST00000446877 ANKRD23Q86SG2 305 aa30.49■■■□□ 2.47
PMS1-214ENST00000446877 CPA4Q9UI42 421 aa30.49■■■□□ 2.47
PMS1-214ENST00000446877 PDHXO00330 501 aa30.48■■■□□ 2.47
PMS1-214ENST00000446877 PSMC4P43686 418 aa30.48■■■□□ 2.47
PMS1-214ENST00000446877 TCP10Q12799 353 aa30.48■■■□□ 2.47
PMS1-214ENST00000446877 COLQQ9Y215 455 aaPredicted RBP30.48■■■□□ 2.47
PMS1-214ENST00000446877 FMNL1O95466 1100 aaPredicted RBP30.47■■■□□ 2.47
PMS1-214ENST00000446877 FXR1P51114 621 aaKnown RBP eCLIP30.47■■■□□ 2.47
PMS1-214ENST00000446877 CDC42EP5Q6NZY7 148 aa30.46■■■□□ 2.47
PMS1-214ENST00000446877 GNL3LQ9NVN8 582 aaKnown RBP30.46■■■□□ 2.47
PMS1-214ENST00000446877 SRRDQ9UH36 339 aa30.46■■■□□ 2.47
PMS1-214ENST00000446877 ZNF112Q9UJU3 913 aa30.46■■■□□ 2.47
PMS1-214ENST00000446877 DAGLAQ9Y4D2 1042 aa30.46■■■□□ 2.47
PMS1-214ENST00000446877 RAET1EQ8TD07 263 aa30.45■■■□□ 2.47
PMS1-214ENST00000446877 KCNH4Q9UQ05 1017 aa30.45■■■□□ 2.47
PMS1-214ENST00000446877 H0YGN5 161 aa30.44■■■□□ 2.46
PMS1-214ENST00000446877 DIXDC1Q155Q3 683 aa30.44■■■□□ 2.46
PMS1-214ENST00000446877 TRIM47Q96LD4 638 aa30.44■■■□□ 2.46
PMS1-214ENST00000446877 LDHBP07195 334 aaKnown RBP30.43■■■□□ 2.46
PMS1-214ENST00000446877 SSH1Q8WYL5 1049 aa30.43■■■□□ 2.46
PMS1-214ENST00000446877 USP40Q9NVE5 1235 aa30.43■■■□□ 2.46
PMS1-214ENST00000446877 OSBPP22059 807 aa30.42■■■□□ 2.46
PMS1-214ENST00000446877 RFX5P48382 616 aaPredicted RBP30.42■■■□□ 2.46
PMS1-214ENST00000446877 NFIAQ12857 509 aa30.42■■■□□ 2.46
PMS1-214ENST00000446877 NKX2-3Q8TAU0 364 aa30.42■■■□□ 2.46
PMS1-214ENST00000446877 ZNF521Q96K83 1311 aa30.42■■■□□ 2.46
PMS1-214ENST00000446877 GRK4P32298 578 aa30.41■■■□□ 2.46
PMS1-214ENST00000446877 MTFR1Q15390 333 aa30.41■■■□□ 2.46
PMS1-214ENST00000446877 NOL9Q5SY16 702 aaKnown RBP30.41■■■□□ 2.46
PMS1-214ENST00000446877 PARK7Q99497 189 aaKnown RBP30.41■■■□□ 2.46
PMS1-214ENST00000446877 CEP126Q9P2H0 1117 aa30.41■■■□□ 2.46
PMS1-214ENST00000446877 BIN2Q9UBW5 565 aaPredicted RBP30.41■■■□□ 2.46
PMS1-214ENST00000446877 CTGFP29279 349 aa30.4■■■□□ 2.46
PMS1-214ENST00000446877 PRDX5P30044 214 aa30.4■■■□□ 2.46
PMS1-214ENST00000446877 ATP2B3Q16720 1220 aa30.4■■■□□ 2.46
PMS1-214ENST00000446877 DPF3Q92784 378 aa30.4■■■□□ 2.46
PMS1-214ENST00000446877 E9PSI1 815 aa30.39■■■□□ 2.46
PMS1-214ENST00000446877 CXCL11O14625 94 aa30.39■■■□□ 2.46
PMS1-214ENST00000446877 ATG9AQ7Z3C6 839 aa30.39■■■□□ 2.46
PMS1-214ENST00000446877 FAM198AQ9UFP1 575 aa30.39■■■□□ 2.46
PMS1-214ENST00000446877 FBXO3Q9UK99 471 aa30.39■■■□□ 2.46
PMS1-214ENST00000446877 MYPNQ86TC9 1320 aa30.39■■■□□ 2.46
PMS1-214ENST00000446877 SIL1Q9H173 461 aa30.38■■■□□ 2.45
PMS1-214ENST00000446877 CEP290O15078 2479 aa30.38■■■□□ 2.45
PMS1-214ENST00000446877 FCGRTP55899 365 aa30.37■■■□□ 2.45
PMS1-214ENST00000446877 MOGSQ13724 837 aa30.37■■■□□ 2.45
PMS1-214ENST00000446877 PICK1Q9NRD5 415 aa30.37■■■□□ 2.45
PMS1-214ENST00000446877 DENND2AQ9ULE3 1009 aa30.37■■■□□ 2.45
PMS1-214ENST00000446877 ADGRA2Q96PE1 1338 aa30.37■■■□□ 2.45
PMS1-214ENST00000446877 SEMA3EO15041 775 aa30.36■■■□□ 2.45
PMS1-214ENST00000446877 CIAO1O76071 339 aa30.36■■■□□ 2.45
PMS1-214ENST00000446877 UBXN2AP68543 259 aa30.36■■■□□ 2.45
PMS1-214ENST00000446877 ZNF316A6NFI3 1004 aaPredicted RBP30.35■■■□□ 2.45
PMS1-214ENST00000446877 GJB1P08034 283 aa30.35■■■□□ 2.45
PMS1-214ENST00000446877 UBTFL1P0CB47 393 aaPredicted RBP30.35■■■□□ 2.45
PMS1-214ENST00000446877 CCL5P13501 91 aa30.35■■■□□ 2.45
PMS1-214ENST00000446877 FASTKD5Q7L8L6 764 aaKnown RBP30.35■■■□□ 2.45
PMS1-214ENST00000446877 SHISA4Q96DD7 197 aa30.35■■■□□ 2.45
PMS1-214ENST00000446877 RNF208Q9H0X6 261 aa30.35■■■□□ 2.45
PMS1-214ENST00000446877 ZHX2Q9Y6X8 837 aa30.35■■■□□ 2.45
PMS1-214ENST00000446877 SALL1Q9NSC2 1324 aa30.34■■■□□ 2.45
PMS1-214ENST00000446877 CYP2C8P10632 490 aa30.34■■■□□ 2.45
PMS1-214ENST00000446877 GPAT2Q6NUI2 795 aa30.34■■■□□ 2.45
PMS1-214ENST00000446877 ZFPM1Q8IX07 1006 aa30.34■■■□□ 2.45
PMS1-214ENST00000446877 ZGPATQ8N5A5 531 aaKnown RBP30.34■■■□□ 2.45
PMS1-214ENST00000446877 GJA8P48165 433 aa30.33■■■□□ 2.45
PMS1-214ENST00000446877 ALDH1L2Q3SY69 923 aa30.33■■■□□ 2.45
PMS1-214ENST00000446877 CHRDL2Q6WN34 429 aa30.33■■■□□ 2.45
PMS1-214ENST00000446877 ZSCAN29Q8IWY8 852 aaPredicted RBP30.33■■■□□ 2.45
PMS1-214ENST00000446877 HTATIP2Q9BUP3 242 aa30.33■■■□□ 2.45
PMS1-214ENST00000446877 HDAC5Q9UQL6 1122 aa30.33■■■□□ 2.45
PMS1-214ENST00000446877 ENTPD3O75355 529 aa30.32■■■□□ 2.44
PMS1-214ENST00000446877 BCRP11274 1271 aa30.32■■■□□ 2.44
PMS1-214ENST00000446877 IL15P40933 162 aaPredicted RBP30.32■■■□□ 2.44
PMS1-214ENST00000446877 RGS3P49796 1198 aa30.32■■■□□ 2.44
PMS1-214ENST00000446877 PRKCZQ05513 592 aa30.32■■■□□ 2.44
PMS1-214ENST00000446877 SCYL3Q8IZE3 742 aa30.32■■■□□ 2.44
PMS1-214ENST00000446877 SMC4Q9NTJ3 1288 aa30.32■■■□□ 2.44
PMS1-214ENST00000446877 LRRFIP2Q9Y608 721 aaKnown RBP30.32■■■□□ 2.44
PMS1-214ENST00000446877 PHKA1P46020 1223 aa30.31■■■□□ 2.44
PMS1-214ENST00000446877 SLF2Q8IX21 1173 aa30.31■■■□□ 2.44
PMS1-214ENST00000446877 SLAIN1Q8ND83 568 aa30.31■■■□□ 2.44
PMS1-214ENST00000446877 IDI2Q9BXS1 227 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms