RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 CCDC102BQ68D86 513 aa13.64□□□□□ -0.23
HLA-F-221ENST00000444621 SSH3Q8TE77 659 aa13.64□□□□□ -0.23
HLA-F-221ENST00000444621 ARMC5Q96C12 935 aa13.64□□□□□ -0.23
HLA-F-221ENST00000444621 HOOK2Q96ED9 719 aa13.64□□□□□ -0.23
HLA-F-221ENST00000444621 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
HLA-F-221ENST00000444621 ERO1AQ96HE7 468 aa13.64□□□□□ -0.23
HLA-F-221ENST00000444621 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
HLA-F-221ENST00000444621 ARAP2Q8WZ64 1704 aa13.64□□□□□ -0.23
HLA-F-221ENST00000444621 IGF2BP3O00425 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
HLA-F-221ENST00000444621 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
HLA-F-221ENST00000444621 RLBP1P12271 317 aa13.63□□□□□ -0.23
HLA-F-221ENST00000444621 POLA2Q14181 598 aa13.63□□□□□ -0.23
HLA-F-221ENST00000444621 CCDC158Q5M9N0 1113 aa13.63□□□□□ -0.23
HLA-F-221ENST00000444621 HHIPL2Q6UWX4 724 aa13.63□□□□□ -0.23
HLA-F-221ENST00000444621 ERC1Q8IUD2 1116 aa13.63□□□□□ -0.23
HLA-F-221ENST00000444621 RPAP2Q8IXW5 612 aaPredicted RBP13.63□□□□□ -0.23
HLA-F-221ENST00000444621 SLC10A4Q96EP9 437 aa13.63□□□□□ -0.23
HLA-F-221ENST00000444621 TDRD3Q9H7E2 651 aaKnown RBP13.63□□□□□ -0.23
HLA-F-221ENST00000444621 ZNF70Q9UC06 446 aaPredicted RBP13.63□□□□□ -0.23
HLA-F-221ENST00000444621 SZT2Q5T011 3432 aa13.62□□□□□ -0.23
HLA-F-221ENST00000444621 PHKA1P46020 1223 aa13.62□□□□□ -0.23
HLA-F-221ENST00000444621 IREB2P48200 963 aaKnown RBP13.62□□□□□ -0.23
HLA-F-221ENST00000444621 PDE3AQ14432 1141 aa13.62□□□□□ -0.23
HLA-F-221ENST00000444621 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
HLA-F-221ENST00000444621 ZDHHC15Q96MV8 337 aa13.62□□□□□ -0.23
HLA-F-221ENST00000444621 EFCC1Q9HA90 598 aa13.62□□□□□ -0.23
HLA-F-221ENST00000444621 GPR108Q9NPR9 543 aa13.62□□□□□ -0.23
HLA-F-221ENST00000444621 ZBTB22O15209 634 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 ADORA1P30542 326 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 CAP1Q01518 475 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 CRHR2Q13324 411 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 RASA3Q14644 834 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 TTC39AQ5SRH9 613 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 DZIP1Q86YF9 867 aaKnown RBP13.61□□□□□ -0.23
HLA-F-221ENST00000444621 WNK4Q96J92 1243 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 CLMNQ96JQ2 1002 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 TMEM106CQ9BVX2 250 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 ABCF2Q9UG63 623 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 PDS5AQ29RF7 1337 aaKnown RBP13.61□□□□□ -0.23
HLA-F-221ENST00000444621 SALL1Q9NSC2 1324 aa13.61□□□□□ -0.23
HLA-F-221ENST00000444621 UNCXA6NJT0 531 aa13.6□□□□□ -0.23
HLA-F-221ENST00000444621 TCP10L2B9ZVM9 353 aa13.6□□□□□ -0.23
HLA-F-221ENST00000444621 ZBTB48P10074 688 aaPredicted RBP13.6□□□□□ -0.23
HLA-F-221ENST00000444621 GSTO1P78417 241 aa13.6□□□□□ -0.23
HLA-F-221ENST00000444621 ERICH6Q7L0X2 663 aa13.6□□□□□ -0.23
HLA-F-221ENST00000444621 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
HLA-F-221ENST00000444621 NOP58Q9Y2X3 529 aaKnown RBP13.6□□□□□ -0.23
HLA-F-221ENST00000444621 PCDHAC2Q9Y5I4 1007 aa13.6□□□□□ -0.23
HLA-F-221ENST00000444621 H0YGN5 161 aa13.59□□□□□ -0.23
HLA-F-221ENST00000444621 LDHCP07864 332 aa13.59□□□□□ -0.23
HLA-F-221ENST00000444621 SP3Q02447 781 aa13.59□□□□□ -0.23
HLA-F-221ENST00000444621 TNNI3KQ59H18 835 aa13.59□□□□□ -0.23
HLA-F-221ENST00000444621 FKBP1CQ5VVH2 108 aa13.59□□□□□ -0.23
HLA-F-221ENST00000444621 CEP85Q6P2H3 762 aa13.59□□□□□ -0.23
HLA-F-221ENST00000444621 SPATA5Q8NB90 893 aa13.59□□□□□ -0.23
HLA-F-221ENST00000444621 ZNF333Q96JL9 665 aa13.59□□□□□ -0.23
HLA-F-221ENST00000444621 NOL10Q9BSC4 688 aaKnown RBP13.59□□□□□ -0.23
HLA-F-221ENST00000444621 FPGT-TNNI3KV9GXZ4 949 aa13.59□□□□□ -0.23
HLA-F-221ENST00000444621 SSC5DA1L4H1 1573 aa13.58□□□□□ -0.23
HLA-F-221ENST00000444621 MAP3K11Q16584 847 aa13.58□□□□□ -0.24
HLA-F-221ENST00000444621 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
HLA-F-221ENST00000444621 LRP2BPQ9P2M1 347 aa13.58□□□□□ -0.24
HLA-F-221ENST00000444621 TRIOBPQ9H2D6 2365 aa13.58□□□□□ -0.24
HLA-F-221ENST00000444621 GJA5P36382 358 aa13.57□□□□□ -0.24
HLA-F-221ENST00000444621 RASGRF1Q13972 1273 aa13.57□□□□□ -0.24
HLA-F-221ENST00000444621 GRIK5Q16478 980 aa13.57□□□□□ -0.24
HLA-F-221ENST00000444621 NBPF12Q5TAG4 269 aaPredicted RBP13.57□□□□□ -0.24
HLA-F-221ENST00000444621 DCAF15Q66K64 600 aa13.57□□□□□ -0.24
HLA-F-221ENST00000444621 OTUD7BQ6GQQ9 843 aa13.57□□□□□ -0.24
HLA-F-221ENST00000444621 FAM83AQ86UY5 434 aa13.57□□□□□ -0.24
HLA-F-221ENST00000444621 PTPN18Q99952 460 aa13.57□□□□□ -0.24
HLA-F-221ENST00000444621 USP40Q9NVE5 1235 aa13.57□□□□□ -0.24
HLA-F-221ENST00000444621 RAI14Q9P0K7 980 aa13.57□□□□□ -0.24
HLA-F-221ENST00000444621 DLL1O00548 723 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 IGSF3O75054 1194 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 RAB11FIP3O75154 756 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
HLA-F-221ENST00000444621 PRDX5P30044 214 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 SLC4A8Q2Y0W8 1093 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 SLC9C1Q4G0N8 1177 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 APOBEC3HQ6NTF7 200 aaKnown RBP13.56□□□□□ -0.24
HLA-F-221ENST00000444621 NBPF11Q86T75 865 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 ANKRD13AQ8IZ07 590 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 CLASRPQ8N2M8 674 aaKnown RBP13.56□□□□□ -0.24
HLA-F-221ENST00000444621 ZBTB40Q9NUA8 1239 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 DAGLAQ9Y4D2 1042 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 PTCH2Q9Y6C5 1203 aa13.56□□□□□ -0.24
HLA-F-221ENST00000444621 OTOFQ9HC10 1997 aa13.55□□□□□ -0.24
HLA-F-221ENST00000444621 MAP4K4O95819 1239 aaPredicted RBP13.55□□□□□ -0.24
HLA-F-221ENST00000444621 MYCP01106 439 aaPredicted RBP13.55□□□□□ -0.24
HLA-F-221ENST00000444621 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
HLA-F-221ENST00000444621 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
HLA-F-221ENST00000444621 KIF1BPQ96EK5 621 aa13.55□□□□□ -0.24
HLA-F-221ENST00000444621 TMEM39BQ9GZU3 492 aa13.55□□□□□ -0.24
HLA-F-221ENST00000444621 EXOC6BQ9Y2D4 811 aa13.55□□□□□ -0.24
HLA-F-221ENST00000444621 CSADQ9Y600 493 aa13.55□□□□□ -0.24
HLA-F-221ENST00000444621 ZSWIM8A7E2V4 1837 aa13.55□□□□□ -0.24
HLA-F-221ENST00000444621 CEP290O15078 2479 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms