RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 TRIM28Q13263 835 aaKnown RBP18.57■□□□□ 0.56
SYNCRIP-203ENST00000444272 CFAP53Q96M91 514 aa18.57■□□□□ 0.56
SYNCRIP-203ENST00000444272 JAG2Q9Y219 1238 aa18.57■□□□□ 0.56
SYNCRIP-203ENST00000444272 GPAT2Q6NUI2 795 aa18.56■□□□□ 0.56
SYNCRIP-203ENST00000444272 CHPF2Q9P2E5 772 aa18.56■□□□□ 0.56
SYNCRIP-203ENST00000444272 KCNH4Q9UQ05 1017 aa18.56■□□□□ 0.56
SYNCRIP-203ENST00000444272 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
SYNCRIP-203ENST00000444272 PRKAG2Q9UGJ0 569 aa18.55■□□□□ 0.56
SYNCRIP-203ENST00000444272 POTEEQ6S8J3 1075 aa18.54■□□□□ 0.56
SYNCRIP-203ENST00000444272 REV3LO60673 3130 aa18.54■□□□□ 0.56
SYNCRIP-203ENST00000444272 FKBP1AP62942 108 aaKnown RBP18.53■□□□□ 0.56
SYNCRIP-203ENST00000444272 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
SYNCRIP-203ENST00000444272 PCCAP05165 728 aaPredicted RBP18.52■□□□□ 0.56
SYNCRIP-203ENST00000444272 INPP5BP32019 993 aa18.52■□□□□ 0.56
SYNCRIP-203ENST00000444272 KCNJ4P48050 445 aa18.52■□□□□ 0.56
SYNCRIP-203ENST00000444272 RIC3Q7Z5B4 369 aa18.52■□□□□ 0.56
SYNCRIP-203ENST00000444272 AK9Q5TCS8 1911 aa18.52■□□□□ 0.56
SYNCRIP-203ENST00000444272 PER1O15534 1290 aaPredicted RBP18.51■□□□□ 0.55
SYNCRIP-203ENST00000444272 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
SYNCRIP-203ENST00000444272 CTSWP56202 376 aa18.5■□□□□ 0.55
SYNCRIP-203ENST00000444272 GAS2L1Q99501 681 aaPredicted RBP18.5■□□□□ 0.55
SYNCRIP-203ENST00000444272 GREM2Q9H772 168 aa18.5■□□□□ 0.55
SYNCRIP-203ENST00000444272 SERPINA10Q9UK55 444 aa18.5■□□□□ 0.55
SYNCRIP-203ENST00000444272 MYH3P11055 1940 aa18.5■□□□□ 0.55
SYNCRIP-203ENST00000444272 WDFY4Q6ZS81 3184 aa18.5■□□□□ 0.55
SYNCRIP-203ENST00000444272 CACNB3P54284 484 aa18.49■□□□□ 0.55
SYNCRIP-203ENST00000444272 CCDC85BQ15834 202 aaPredicted RBP18.49■□□□□ 0.55
SYNCRIP-203ENST00000444272 SMCR8Q8TEV9 937 aaPredicted RBP18.49■□□□□ 0.55
SYNCRIP-203ENST00000444272 ANKRD2Q9GZV1 360 aa18.49■□□□□ 0.55
SYNCRIP-203ENST00000444272 TTF2Q9UNY4 1162 aaKnown RBP18.49■□□□□ 0.55
SYNCRIP-203ENST00000444272 FAM86C2PA6NEL3 165 aa18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 PRKAR2AP13861 404 aaKnown RBP18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 AKNAD1Q5T1N1 836 aa18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 DCAF15Q66K64 600 aa18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 MIGA2Q7L4E1 593 aa18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 ANKRD13CQ8N6S4 541 aa18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 TRIB2Q92519 343 aa18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 ZNF341Q9BYN7 854 aa18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 SENP6Q9GZR1 1112 aaPredicted RBP18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 ZNF576Q9H609 170 aa18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 C11orf16Q9NQ32 467 aa18.48■□□□□ 0.55
SYNCRIP-203ENST00000444272 SNAP23O00161 211 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 NEFMP07197 916 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 BMP1P13497 986 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 IL1R1P14778 569 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 DNAJB2P25686 324 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 ATN1P54259 1190 aaPredicted RBP18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 MAP3K21Q5TCX8 1036 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 TTLL11Q8NHH1 800 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 BADQ92934 168 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 HOOK2Q96ED9 719 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 MYD88Q99836 296 aa18.47■□□□□ 0.55
SYNCRIP-203ENST00000444272 FRMPD3Q5JV73 1810 aa18.46■□□□□ 0.55
SYNCRIP-203ENST00000444272 GPR37L1O60883 481 aa18.46■□□□□ 0.55
SYNCRIP-203ENST00000444272 IGHMBP2P38935 993 aaKnown RBP18.46■□□□□ 0.55
SYNCRIP-203ENST00000444272 KRT24Q2M2I5 525 aa18.46■□□□□ 0.55
SYNCRIP-203ENST00000444272 PLXNB2O15031 1838 aa18.45■□□□□ 0.54
SYNCRIP-203ENST00000444272 CRKP46108 304 aa18.45■□□□□ 0.54
SYNCRIP-203ENST00000444272 ZNF804AQ7Z570 1209 aa18.45■□□□□ 0.54
SYNCRIP-203ENST00000444272 CCDC191Q8NCU4 936 aa18.45■□□□□ 0.54
SYNCRIP-203ENST00000444272 RNPC3Q96LT9 517 aaKnown RBP18.45■□□□□ 0.54
SYNCRIP-203ENST00000444272 CXCL11O14625 94 aa18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 RTP1P59025 263 aa18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 NFE2L2Q16236 605 aa18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 LHX8Q68G74 356 aa18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 GADL1Q6ZQY3 521 aa18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 FASTKD5Q7L8L6 764 aaKnown RBP18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 PRDM5Q9NQX1 630 aaPredicted RBP18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 CWC25Q9NXE8 425 aaPredicted RBP18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 GJD2Q9UKL4 321 aa18.44■□□□□ 0.54
SYNCRIP-203ENST00000444272 CHD9Q3L8U1 2897 aa18.43■□□□□ 0.54
SYNCRIP-203ENST00000444272 CHRNDQ07001 517 aa18.43■□□□□ 0.54
SYNCRIP-203ENST00000444272 MFSD14BQ5SR56 506 aa18.43■□□□□ 0.54
SYNCRIP-203ENST00000444272 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
SYNCRIP-203ENST00000444272 USP34Q70CQ2 3546 aa18.42■□□□□ 0.54
SYNCRIP-203ENST00000444272 A0A0G2JLL6 359 aaPredicted RBP18.42■□□□□ 0.54
SYNCRIP-203ENST00000444272 FAM110CQ1W6H9 321 aa18.42■□□□□ 0.54
SYNCRIP-203ENST00000444272 PRRT2Q7Z6L0 340 aaPredicted RBP18.42■□□□□ 0.54
SYNCRIP-203ENST00000444272 PRDM12Q9H4Q4 367 aa18.42■□□□□ 0.54
SYNCRIP-203ENST00000444272 ATP11BQ9Y2G3 1177 aa18.42■□□□□ 0.54
SYNCRIP-203ENST00000444272 SLC45A1Q9Y2W3 748 aa18.42■□□□□ 0.54
SYNCRIP-203ENST00000444272 CYP2B6P20813 491 aa18.41■□□□□ 0.54
SYNCRIP-203ENST00000444272 NHLH1Q02575 133 aa18.41■□□□□ 0.54
SYNCRIP-203ENST00000444272 TIFAQ96CG3 184 aa18.41■□□□□ 0.54
SYNCRIP-203ENST00000444272 MPHOSPH8Q99549 860 aa18.41■□□□□ 0.54
SYNCRIP-203ENST00000444272 CXXC1Q9P0U4 656 aaPredicted RBP18.41■□□□□ 0.54
SYNCRIP-203ENST00000444272 PTPRFP10586 1907 aa18.41■□□□□ 0.54
SYNCRIP-203ENST00000444272 A0A1B0GUL6 1792 aa18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 TAF5LO75529 589 aa18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 CCND3P30281 292 aaPredicted RBP18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 KCNQ1P51787 676 aa18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 TFF2Q03403 129 aa18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 CACNB2Q08289 660 aaPredicted RBP18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 GOLGA2Q08379 1002 aa18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 C15orf52Q6ZUT6 534 aaKnown RBP18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 FAM83AQ86UY5 434 aa18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 HYPKQ9NX55 129 aa18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 ZNF112Q9UJU3 913 aa18.4■□□□□ 0.54
SYNCRIP-203ENST00000444272 MYO9BQ13459 2157 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms