RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 NEUROD6Q96NK8 337 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 GCKP35557 465 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 NCAPHQ15003 741 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 HDGFP51858 240 aaKnown RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 CEP85LQ5SZL2 805 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 BCAS4Q8TDM0 211 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 ATP2C2O75185 946 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 CHPF2Q9P2E5 772 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 MPHOSPH10O00566 681 aaKnown RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 NUDT16Q96DE0 195 aaKnown RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 RPGRIP1Q96KN7 1286 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 UHRF1BP1LA0JNW5 1464 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 CPSF1Q10570 1443 aaKnown RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 USP14P54578 494 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 CCDC122Q5T0U0 273 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 ZNF589Q86UQ0 364 aaPredicted RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 SAR1BQ9Y6B6 198 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 VAV2P52735 878 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 UBXN1Q04323 297 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 ZNF274Q96GC6 653 aaPredicted RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 IRX1P78414 480 aaPredicted RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 CCDC40Q4G0X9 1142 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 TBC1D22AQ8WUA7 517 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 PCDHA5Q9Y5H7 936 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 CCDC129Q6ZRS4 1044 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 NPM1P06748 294 aaKnown RBP eCLIP5.66□□□□□ -1.5
HERC1-201ENST00000443617 WASHC4Q2M389 1173 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 ENOX1Q8TC92 643 aaKnown RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 LUC7L2Q9Y383 392 aaKnown RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 GCOM1H8Y6P7 765 aaPredicted RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 BUB1BO60566 1050 aaPredicted RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 MYZAPP0CAP1 466 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 PLCD1P51178 756 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 RAB11FIP4Q86YS3 637 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 ALS2CR12Q96Q35 445 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 MAP3K2Q9Y2U5 619 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 PAX7P23759 505 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 MYSM1Q5VVJ2 828 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 PARP9Q8IXQ6 854 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 WASF1Q92558 559 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 WASLO00401 505 aaPredicted RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 GPTP24298 496 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 KRT83P78385 493 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 CFAP58Q5T655 872 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 ANKS4BQ8N8V4 417 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 CFAP74Q9C0B2 1584 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 SLC35F6Q8N357 371 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 CDC5LQ99459 802 aaKnown RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 RIPOR2Q9Y4F9 1068 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 TCHHQ07283 1943 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 ERCC5P28715 1186 aaPredicted RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 PDIA3P30101 505 aaKnown RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 AIMP1Q12904 312 aaKnown RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 ATP10DQ9P241 1426 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 MYO1FO00160 1098 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 SPAG1Q07617 926 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 POSTNQ15063 836 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 CCDC181Q5TID7 509 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 NOA1Q8NC60 698 aaKnown RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 ACRBPQ8NEB7 543 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 OR8K1Q8NGG5 319 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 ALG1Q9BT22 464 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 USP42Q9H9J4 1324 aaKnown RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 MSANTD4Q8NCY6 345 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 EPN3Q9H201 632 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 MAN1B1Q9UKM7 699 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 SALL3Q9BXA9 1300 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 NNTQ13423 1086 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 CCDC96Q2M329 555 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 TEX11Q8IYF3 940 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 SLC24A3Q9HC58 644 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 REREQ9P2R6 1566 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 KSR2Q6VAB6 950 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 IFT20Q8IY31 132 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 AMOTL1Q8IY63 956 aa5.66□□□□□ -1.5
HERC1-201ENST00000443617 PHAXQ9H814 394 aaKnown RBP5.66□□□□□ -1.5
HERC1-201ENST00000443617 PLCD4Q9BRC7 762 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 SELENOOQ9BVL4 669 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 TACC1O75410 805 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 BEND3Q5T5X7 828 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 SPATA1Q5VX52 437 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 RCSD1Q6JBY9 416 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 STK11IPQ8N1F8 1099 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 EAF2Q96CJ1 260 aaPredicted RBP5.65□□□□□ -1.5
HERC1-201ENST00000443617 ANKRD18BA2A2Z9 1011 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 ATP5JP18859 108 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 ATP1A2P50993 1020 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 CCNI2Q6ZMN8 369 aaPredicted RBP5.65□□□□□ -1.5
HERC1-201ENST00000443617 TRMT44Q8IYL2 757 aaKnown RBP5.65□□□□□ -1.5
HERC1-201ENST00000443617 COG1Q8WTW3 980 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 KLF18A0A0U1RQI7 1052 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 HPDP32754 393 aaPredicted RBP5.65□□□□□ -1.5
HERC1-201ENST00000443617 STX17P56962 302 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 MAP2K1Q02750 393 aaPredicted RBP5.65□□□□□ -1.5
HERC1-201ENST00000443617 NGDNQ8NEJ9 315 aaKnown RBP5.65□□□□□ -1.5
HERC1-201ENST00000443617 ECM2O94769 699 aaPredicted RBP5.65□□□□□ -1.5
HERC1-201ENST00000443617 SSRP1Q08945 709 aaKnown RBP5.65□□□□□ -1.5
HERC1-201ENST00000443617 SPECC1Q5M775 1068 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 RESP18Q5W5W9 173 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 CHST3Q7LGC8 479 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms