RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SUGT1Q9Y2Z0 365 aa18.2■□□□□ 0.5
HMGN1-208ENST00000443046 OSBPP22059 807 aa18.19■□□□□ 0.5
HMGN1-208ENST00000443046 CHAF1AQ13111 956 aaPredicted RBP18.19■□□□□ 0.5
HMGN1-208ENST00000443046 RABL6Q3YEC7 729 aaPredicted RBP18.19■□□□□ 0.5
HMGN1-208ENST00000443046 DCAF15Q66K64 600 aa18.19■□□□□ 0.5
HMGN1-208ENST00000443046 HHIPL2Q6UWX4 724 aa18.19■□□□□ 0.5
HMGN1-208ENST00000443046 NKX2-3Q8TAU0 364 aa18.19■□□□□ 0.5
HMGN1-208ENST00000443046 CPA4Q9UI42 421 aa18.19■□□□□ 0.5
HMGN1-208ENST00000443046 PDE8BO95263 885 aa18.18■□□□□ 0.5
HMGN1-208ENST00000443046 GJB1P08034 283 aa18.18■□□□□ 0.5
HMGN1-208ENST00000443046 NBPF7P0C2Y1 421 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-208ENST00000443046 GRK4P32298 578 aa18.18■□□□□ 0.5
HMGN1-208ENST00000443046 LRRC24Q50LG9 513 aa18.18■□□□□ 0.5
HMGN1-208ENST00000443046 VPS37DQ86XT2 251 aa18.18■□□□□ 0.5
HMGN1-208ENST00000443046 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-208ENST00000443046 ZNF341Q9BYN7 854 aa18.18■□□□□ 0.5
HMGN1-208ENST00000443046 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
HMGN1-208ENST00000443046 PDHXO00330 501 aa18.17■□□□□ 0.5
HMGN1-208ENST00000443046 HOXD10P28358 340 aa18.17■□□□□ 0.5
HMGN1-208ENST00000443046 INPP5BP32019 993 aa18.17■□□□□ 0.5
HMGN1-208ENST00000443046 BCAMP50895 628 aa18.17■□□□□ 0.5
HMGN1-208ENST00000443046 CAVIN4Q5BKX8 364 aa18.17■□□□□ 0.5
HMGN1-208ENST00000443046 MIGA2Q7L4E1 593 aa18.17■□□□□ 0.5
HMGN1-208ENST00000443046 DPF3Q92784 378 aa18.17■□□□□ 0.5
HMGN1-208ENST00000443046 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
HMGN1-208ENST00000443046 TMOD2Q9NZR1 351 aa18.17■□□□□ 0.5
HMGN1-208ENST00000443046 KIF16BQ96L93 1317 aa18.17■□□□□ 0.5
HMGN1-208ENST00000443046 ANKRD44Q8N8A2 993 aa18.16■□□□□ 0.5
HMGN1-208ENST00000443046 FAM151AQ8WW52 585 aa18.16■□□□□ 0.5
HMGN1-208ENST00000443046 MAST3O60307 1309 aa18.16■□□□□ 0.5
HMGN1-208ENST00000443046 BCRP11274 1271 aa18.15■□□□□ 0.5
HMGN1-208ENST00000443046 CCL5P13501 91 aa18.15■□□□□ 0.5
HMGN1-208ENST00000443046 FGFR2P21802 821 aa18.15■□□□□ 0.5
HMGN1-208ENST00000443046 NOL9Q5SY16 702 aaKnown RBP18.15■□□□□ 0.5
HMGN1-208ENST00000443046 RAET1EQ8TD07 263 aa18.15■□□□□ 0.5
HMGN1-208ENST00000443046 BICC1Q9H694 974 aaKnown RBP18.15■□□□□ 0.5
HMGN1-208ENST00000443046 MGAMO43451 1857 aa18.15■□□□□ 0.5
HMGN1-208ENST00000443046 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
HMGN1-208ENST00000443046 FMNL1O95466 1100 aaPredicted RBP18.14■□□□□ 0.49
HMGN1-208ENST00000443046 METTL24Q5JXM2 366 aa18.14■□□□□ 0.49
HMGN1-208ENST00000443046 GPAT2Q6NUI2 795 aa18.14■□□□□ 0.49
HMGN1-208ENST00000443046 SLC4A10Q6U841 1118 aa18.14■□□□□ 0.49
HMGN1-208ENST00000443046 HTATIP2Q9BUP3 242 aa18.14■□□□□ 0.49
HMGN1-208ENST00000443046 RNF208Q9H0X6 261 aa18.14■□□□□ 0.49
HMGN1-208ENST00000443046 MYPNQ86TC9 1320 aa18.14■□□□□ 0.49
HMGN1-208ENST00000443046 ECM2O94769 699 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-208ENST00000443046 ZBTB7BO15156 539 aaPredicted RBP18.12■□□□□ 0.49
HMGN1-208ENST00000443046 PRKCZQ05513 592 aa18.12■□□□□ 0.49
HMGN1-208ENST00000443046 CDC42EP5Q6NZY7 148 aa18.12■□□□□ 0.49
HMGN1-208ENST00000443046 LAMA2P24043 3122 aaKnown RBP18.11■□□□□ 0.49
HMGN1-208ENST00000443046 CXCL11O14625 94 aa18.11■□□□□ 0.49
HMGN1-208ENST00000443046 UBXN2AP68543 259 aa18.11■□□□□ 0.49
HMGN1-208ENST00000443046 NFIAQ12857 509 aa18.11■□□□□ 0.49
HMGN1-208ENST00000443046 SLAIN1Q8ND83 568 aa18.11■□□□□ 0.49
HMGN1-208ENST00000443046 U2AF1L4Q8WU68 220 aaKnown RBP18.11■□□□□ 0.49
HMGN1-208ENST00000443046 PARK7Q99497 189 aaKnown RBP18.11■□□□□ 0.49
HMGN1-208ENST00000443046 DAGLAQ9Y4D2 1042 aa18.11■□□□□ 0.49
HMGN1-208ENST00000443046 NR2E3Q9Y5X4 410 aa18.11■□□□□ 0.49
HMGN1-208ENST00000443046 AK9Q5TCS8 1911 aa18.11■□□□□ 0.49
HMGN1-208ENST00000443046 MYH13Q9UKX3 1938 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 ATRNL1Q5VV63 1379 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 A0A1W2PPC1 479 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 SGPL1O95470 568 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 FCGRTP55899 365 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 PUM3Q15397 648 aaKnown RBP18.1■□□□□ 0.49
HMGN1-208ENST00000443046 KLHDC4Q8TBB5 520 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 WDR66Q8TBY9 1149 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 UNC93B1Q9H1C4 597 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 FAM198AQ9UFP1 575 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 GABRQQ9UN88 632 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 SALL2Q9Y467 1007 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-208ENST00000443046 CUL9Q8IWT3 2517 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 UNC80Q8N2C7 3258 aa18.1■□□□□ 0.49
HMGN1-208ENST00000443046 PHF20L1A8MW92 1017 aa18.09■□□□□ 0.49
HMGN1-208ENST00000443046 FARP2O94887 1054 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-208ENST00000443046 IFIT1P09914 478 aaKnown RBP18.09■□□□□ 0.49
HMGN1-208ENST00000443046 CYP2C8P10632 490 aa18.09■□□□□ 0.49
HMGN1-208ENST00000443046 CAPN2P17655 700 aa18.09■□□□□ 0.49
HMGN1-208ENST00000443046 A0A0G2JLL6 359 aaPredicted RBP18.08■□□□□ 0.48
HMGN1-208ENST00000443046 RFX5P48382 616 aaPredicted RBP18.08■□□□□ 0.48
HMGN1-208ENST00000443046 TCP10Q12799 353 aa18.08■□□□□ 0.48
HMGN1-208ENST00000443046 DIXDC1Q155Q3 683 aa18.08■□□□□ 0.48
HMGN1-208ENST00000443046 PRRT2Q7Z6L0 340 aaPredicted RBP18.08■□□□□ 0.48
HMGN1-208ENST00000443046 PXYLP1Q8TE99 480 aa18.08■□□□□ 0.48
HMGN1-208ENST00000443046 BIN2Q9UBW5 565 aaPredicted RBP18.08■□□□□ 0.48
HMGN1-208ENST00000443046 MAP3K10Q02779 954 aa18.07■□□□□ 0.48
HMGN1-208ENST00000443046 ZFPM1Q8IX07 1006 aa18.07■□□□□ 0.48
HMGN1-208ENST00000443046 SLC45A1Q9Y2W3 748 aa18.07■□□□□ 0.48
HMGN1-208ENST00000443046 PTPRFP10586 1907 aa18.07■□□□□ 0.48
HMGN1-208ENST00000443046 DOCK3Q8IZD9 2030 aa18.06■□□□□ 0.48
HMGN1-208ENST00000443046 ADCY3O60266 1144 aa18.06■□□□□ 0.48
HMGN1-208ENST00000443046 PRDX5P30044 214 aa18.06■□□□□ 0.48
HMGN1-208ENST00000443046 FLT3LGP49771 235 aa18.06■□□□□ 0.48
HMGN1-208ENST00000443046 IRF5Q13568 498 aa18.06■□□□□ 0.48
HMGN1-208ENST00000443046 FASTKD5Q7L8L6 764 aaKnown RBP18.06■□□□□ 0.48
HMGN1-208ENST00000443046 LPIN2Q92539 896 aa18.06■□□□□ 0.48
HMGN1-208ENST00000443046 USP44Q9H0E7 712 aa18.06■□□□□ 0.48
HMGN1-208ENST00000443046 PAK6Q9NQU5 681 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-208ENST00000443046 AFG3L2Q9Y4W6 797 aa18.06■□□□□ 0.48
HMGN1-208ENST00000443046 DNAH12Q6ZR08 3092 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms