RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 DDX21Q9NR30 783 aaKnown RBP eCLIP11.56□□□□□ -0.56
LIN54-202ENST00000442461 MIS18AQ9NYP9 233 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 RABGAP1Q9Y3P9 1069 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 KRT13P13646 458 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 PRPHP41219 470 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 FBXW10Q5XX13 1052 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 SLC30A9Q6PML9 568 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 MICU3Q86XE3 530 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 GBP7Q8N8V2 638 aaPredicted RBP11.55□□□□□ -0.56
LIN54-202ENST00000442461 VPS16Q9H269 839 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 HAUS4Q9H6D7 363 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 ENO4A6NNW6 628 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 CTNNA1P35221 906 aaKnown RBP11.55□□□□□ -0.56
LIN54-202ENST00000442461 SOGA3Q5TF21 947 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 CCDC110Q8TBZ0 833 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 ABTB1Q969K4 478 aaPredicted RBP11.55□□□□□ -0.56
LIN54-202ENST00000442461 KLHL14Q9P2G3 628 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 POLKQ9UBT6 870 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 SGSM2O43147 1006 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 KLHL29Q96CT2 875 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 LLPHQ9BRT6 129 aaKnown RBP11.55□□□□□ -0.56
LIN54-202ENST00000442461 ZNF692Q9BU19 519 aaPredicted RBP11.55□□□□□ -0.56
LIN54-202ENST00000442461 ZNF131P52739 623 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 PLCB1Q9NQ66 1216 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 CABP1Q9NZU7 370 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 MYO1AQ9UBC5 1043 aa11.55□□□□□ -0.56
LIN54-202ENST00000442461 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.55□□□□□ -0.56
LIN54-202ENST00000442461 OPHN1O60890 802 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 RBM6P78332 1123 aaKnown RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 MYO1EQ12965 1108 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 SPTY2D1Q68D10 685 aaPredicted RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 TMEM87AQ8NBN3 555 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 IQCGQ9H095 443 aaKnown RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 AKAP2Q9Y2D5 859 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 AQRO60306 1485 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIN54-202ENST00000442461 ACTN4O43707 911 aaKnown RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 RAD21O60216 631 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 GUCY2FP51841 1108 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 CRYMQ14894 314 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 HSP90AA5PQ58FG0 334 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 NBPF14Q5TI25 921 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 ANO1Q5XXA6 986 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 NAA16Q6N069 864 aaPredicted RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 SARM1Q6SZW1 724 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 MIER3Q7Z3K6 550 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 CCDC25Q86WR0 208 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 NCOA7Q8NI08 942 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 SLC26A6Q9BXS9 759 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 IKBKGQ9Y6K9 419 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 RGS12O14924 1447 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 TXNDC9O14530 226 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 IFIT3O14879 490 aaKnown RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 CASQ2O14958 399 aaPredicted RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 HNRNPH1P31943 449 aaKnown RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 CALCOCO2Q13137 446 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 ARID5BQ14865 1188 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 PPP1R14CQ8TAE6 165 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 KCNH3Q9ULD8 1083 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 SUPT6HQ7KZ85 1726 aaKnown RBP11.54□□□□□ -0.56
LIN54-202ENST00000442461 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
LIN54-202ENST00000442461 FLOT1O75955 427 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 TRIM58Q8NG06 486 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 HOMER3Q9NSC5 361 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 IFIT1P09914 478 aaKnown RBP11.53□□□□□ -0.56
LIN54-202ENST00000442461 EPHB4P54760 987 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 ADALQ6DHV7 355 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
LIN54-202ENST00000442461 DHX32Q7L7V1 743 aaKnown RBP11.53□□□□□ -0.56
LIN54-202ENST00000442461 NOX5Q96PH1 765 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 PSMB7Q99436 277 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 SKIP12755 728 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 RPS6KB1P23443 525 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 CCDC92Q53HC0 331 aaPredicted RBP11.53□□□□□ -0.56
LIN54-202ENST00000442461 FYB2Q5VWT5 728 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 PARP9Q8IXQ6 854 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 TCP11L1Q9NUJ3 509 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 NSD2O96028 1365 aa11.53□□□□□ -0.56
LIN54-202ENST00000442461 DTNBO60941 627 aa11.52□□□□□ -0.56
LIN54-202ENST00000442461 TCP1P17987 556 aaKnown RBP11.52□□□□□ -0.56
LIN54-202ENST00000442461 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.56
LIN54-202ENST00000442461 NMIQ13287 307 aaPredicted RBP11.52□□□□□ -0.56
LIN54-202ENST00000442461 CCDC65Q8IXS2 484 aa11.52□□□□□ -0.56
LIN54-202ENST00000442461 UTP11Q9Y3A2 253 aaKnown RBP11.52□□□□□ -0.56
LIN54-202ENST00000442461 TADA3O75528 432 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 KCNF1Q9H3M0 494 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 EXOC1Q9NV70 894 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 PALD1Q9ULE6 856 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 PSMC4P43686 418 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 RNASE9P60153 205 aaKnown RBP11.52□□□□□ -0.57
LIN54-202ENST00000442461 PDCLQ13371 301 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 NNTQ13423 1086 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 MAP7D1Q3KQU3 841 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 ALS2CLQ60I27 953 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 TESK2Q96S53 571 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms