RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 XAGE2Q96GT9 111 aa25.15■■□□□ 1.62
NCKIPSD-206ENST00000439518 RPAP1Q9BWH6 1393 aaPredicted RBP25.15■■□□□ 1.62
NCKIPSD-206ENST00000439518 TESPA1A2RU30 521 aaPredicted RBP25.14■■□□□ 1.62
NCKIPSD-206ENST00000439518 RGS19P49795 217 aa25.14■■□□□ 1.62
NCKIPSD-206ENST00000439518 HOOK2Q96ED9 719 aa25.14■■□□□ 1.62
NCKIPSD-206ENST00000439518 MVPQ14764 893 aaKnown RBP25.13■■□□□ 1.61
NCKIPSD-206ENST00000439518 ZGPATQ8N5A5 531 aaKnown RBP25.13■■□□□ 1.61
NCKIPSD-206ENST00000439518 FAM151AQ8WW52 585 aa25.13■■□□□ 1.61
NCKIPSD-206ENST00000439518 CNKSR2Q8WXI2 1034 aa25.13■■□□□ 1.61
NCKIPSD-206ENST00000439518 MS4A4AQ96JQ5 239 aa25.13■■□□□ 1.61
NCKIPSD-206ENST00000439518 PTPN18Q99952 460 aa25.12■■□□□ 1.61
NCKIPSD-206ENST00000439518 CSADQ9Y600 493 aa25.12■■□□□ 1.61
NCKIPSD-206ENST00000439518 FKTNO75072 461 aa25.11■■□□□ 1.61
NCKIPSD-206ENST00000439518 RLBP1P12271 317 aa25.11■■□□□ 1.61
NCKIPSD-206ENST00000439518 NFIAQ12857 509 aa25.11■■□□□ 1.61
NCKIPSD-206ENST00000439518 G3BP1Q13283 466 aaKnown RBP eCLIP25.11■■□□□ 1.61
NCKIPSD-206ENST00000439518 POLA2Q14181 598 aa25.11■■□□□ 1.61
NCKIPSD-206ENST00000439518 PKN2Q16513 984 aaKnown RBP25.11■■□□□ 1.61
NCKIPSD-206ENST00000439518 NEUROD6Q96NK8 337 aa25.1■■□□□ 1.61
NCKIPSD-206ENST00000439518 WRNIP1Q96S55 665 aa25.1■■□□□ 1.61
NCKIPSD-206ENST00000439518 USP40Q9NVE5 1235 aa25.1■■□□□ 1.61
NCKIPSD-206ENST00000439518 FAM198AQ9UFP1 575 aa25.1■■□□□ 1.61
NCKIPSD-206ENST00000439518 SNCAIPQ9Y6H5 919 aa25.1■■□□□ 1.61
NCKIPSD-206ENST00000439518 GAKO14976 1311 aa25.1■■□□□ 1.61
NCKIPSD-206ENST00000439518 SPDYE5A6NIY4 337 aa25.09■■□□□ 1.61
NCKIPSD-206ENST00000439518 ATP8B2P98198 1209 aa25.09■■□□□ 1.61
NCKIPSD-206ENST00000439518 DCAF15Q66K64 600 aa25.09■■□□□ 1.61
NCKIPSD-206ENST00000439518 OTUD7BQ6GQQ9 843 aa25.09■■□□□ 1.61
NCKIPSD-206ENST00000439518 FTSJ3Q8IY81 847 aaKnown RBP25.09■■□□□ 1.61
NCKIPSD-206ENST00000439518 SSH3Q8TE77 659 aa25.09■■□□□ 1.61
NCKIPSD-206ENST00000439518 FAM163AQ96GL9 167 aaPredicted RBP25.09■■□□□ 1.61
NCKIPSD-206ENST00000439518 ZBTB7BO15156 539 aaPredicted RBP25.08■■□□□ 1.61
NCKIPSD-206ENST00000439518 TCP10Q12799 353 aa25.08■■□□□ 1.61
NCKIPSD-206ENST00000439518 SPTY2D1Q68D10 685 aaPredicted RBP25.08■■□□□ 1.61
NCKIPSD-206ENST00000439518 BRI3BPQ8WY22 251 aa25.08■■□□□ 1.61
NCKIPSD-206ENST00000439518 ZKSCAN4Q969J2 545 aaPredicted RBP25.08■■□□□ 1.61
NCKIPSD-206ENST00000439518 OTUD5Q96G74 571 aa25.08■■□□□ 1.61
NCKIPSD-206ENST00000439518 HMG20BQ9P0W2 317 aa25.08■■□□□ 1.61
NCKIPSD-206ENST00000439518 ABCF2Q9UG63 623 aa25.08■■□□□ 1.61
NCKIPSD-206ENST00000439518 CRHR2Q13324 411 aa25.07■■□□□ 1.6
NCKIPSD-206ENST00000439518 ERO1BQ86YB8 467 aa25.07■■□□□ 1.6
NCKIPSD-206ENST00000439518 DZIP1Q86YF9 867 aaKnown RBP25.07■■□□□ 1.6
NCKIPSD-206ENST00000439518 ZNF341Q9BYN7 854 aa25.07■■□□□ 1.6
NCKIPSD-206ENST00000439518 ARID4AP29374 1257 aaPredicted RBP25.06■■□□□ 1.6
NCKIPSD-206ENST00000439518 GTF2A2P52657 109 aa25.06■■□□□ 1.6
NCKIPSD-206ENST00000439518 GORABQ5T7V8 394 aa25.06■■□□□ 1.6
NCKIPSD-206ENST00000439518 MIGA2Q7L4E1 593 aa25.06■■□□□ 1.6
NCKIPSD-206ENST00000439518 ITPRIPQ8IWB1 547 aa25.06■■□□□ 1.6
NCKIPSD-206ENST00000439518 ZFPM1Q8IX07 1006 aa25.06■■□□□ 1.6
NCKIPSD-206ENST00000439518 IDI2Q9BXS1 227 aa25.06■■□□□ 1.6
NCKIPSD-206ENST00000439518 HPS5Q9UPZ3 1129 aa25.06■■□□□ 1.6
NCKIPSD-206ENST00000439518 MYH2Q9UKX2 1941 aa25.06■■□□□ 1.6
NCKIPSD-206ENST00000439518 SLF2Q8IX21 1173 aa25.05■■□□□ 1.6
NCKIPSD-206ENST00000439518 SPATA5Q8NB90 893 aa25.05■■□□□ 1.6
NCKIPSD-206ENST00000439518 ZNF384Q8TF68 577 aa25.05■■□□□ 1.6
NCKIPSD-206ENST00000439518 C1orf115Q9H7X2 142 aa25.05■■□□□ 1.6
NCKIPSD-206ENST00000439518 GPR108Q9NPR9 543 aa25.05■■□□□ 1.6
NCKIPSD-206ENST00000439518 ZNF112Q9UJU3 913 aa25.05■■□□□ 1.6
NCKIPSD-206ENST00000439518 RFX7Q2KHR2 1363 aa25.05■■□□□ 1.6
NCKIPSD-206ENST00000439518 CCL15-CCL14A0A0B4J2E2 113 aa25.04■■□□□ 1.6
NCKIPSD-206ENST00000439518 INPP5BP32019 993 aa25.04■■□□□ 1.6
NCKIPSD-206ENST00000439518 MECOMQ03112 1051 aa25.04■■□□□ 1.6
NCKIPSD-206ENST00000439518 CCL15Q16663 113 aa25.04■■□□□ 1.6
NCKIPSD-206ENST00000439518 PI16Q6UXB8 463 aa25.04■■□□□ 1.6
NCKIPSD-206ENST00000439518 ENTPD3O75355 529 aa25.03■■□□□ 1.6
NCKIPSD-206ENST00000439518 RGS3P49796 1198 aa25.03■■□□□ 1.6
NCKIPSD-206ENST00000439518 MLLT1Q03111 559 aaPredicted RBP25.03■■□□□ 1.6
NCKIPSD-206ENST00000439518 FBXO46Q6PJ61 603 aaPredicted RBP25.03■■□□□ 1.6
NCKIPSD-206ENST00000439518 ERICH6Q7L0X2 663 aa25.03■■□□□ 1.6
NCKIPSD-206ENST00000439518 NOP58Q9Y2X3 529 aaKnown RBP25.03■■□□□ 1.6
NCKIPSD-206ENST00000439518 MROH7-TTC4A0A0A0MT08 1334 aa25.03■■□□□ 1.6
NCKIPSD-206ENST00000439518 IRF6O14896 467 aa25.02■■□□□ 1.6
NCKIPSD-206ENST00000439518 PPIL2Q13356 520 aa25.02■■□□□ 1.6
NCKIPSD-206ENST00000439518 GPR75-ASB3A0A0A6YYF3 556 aa25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 SURF6O75683 361 aaKnown RBP25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 WDHD1O75717 1129 aaPredicted RBP25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 UQCRFS1P1P0C7P4 283 aa25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 MCAMP43121 646 aa25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 BTDP43251 543 aa25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 TNNI3KQ59H18 835 aa25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 TBC1D9Q6ZT07 1266 aa25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 FAM43AQ8N2R8 423 aa25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 FPGT-TNNI3KV9GXZ4 949 aa25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 ATRNL1Q5VV63 1379 aa25.01■■□□□ 1.59
NCKIPSD-206ENST00000439518 CETPP11597 493 aa25■■□□□ 1.59
NCKIPSD-206ENST00000439518 PPATQ06203 517 aa25■■□□□ 1.59
NCKIPSD-206ENST00000439518 SNAPC2Q13487 334 aa25■■□□□ 1.59
NCKIPSD-206ENST00000439518 SH3BP5LQ7L8J4 393 aa25■■□□□ 1.59
NCKIPSD-206ENST00000439518 NSUN4Q96CB9 384 aaKnown RBP25■■□□□ 1.59
NCKIPSD-206ENST00000439518 RHBDL3P58872 404 aa24.99■■□□□ 1.59
NCKIPSD-206ENST00000439518 OS9Q13438 667 aaPredicted RBP24.99■■□□□ 1.59
NCKIPSD-206ENST00000439518 NOL9Q5SY16 702 aaKnown RBP24.99■■□□□ 1.59
NCKIPSD-206ENST00000439518 OTOP1Q7RTM1 612 aa24.99■■□□□ 1.59
NCKIPSD-206ENST00000439518 PANK1Q8TE04 598 aa24.99■■□□□ 1.59
NCKIPSD-206ENST00000439518 ERO1AQ96HE7 468 aa24.99■■□□□ 1.59
NCKIPSD-206ENST00000439518 DDX4Q9NQI0 724 aaKnown RBP24.99■■□□□ 1.59
NCKIPSD-206ENST00000439518 AK9Q5TCS8 1911 aa24.98■■□□□ 1.59
NCKIPSD-206ENST00000439518 SOX10P56693 466 aa24.98■■□□□ 1.59
NCKIPSD-206ENST00000439518 SP3Q02447 781 aa24.98■■□□□ 1.59
NCKIPSD-206ENST00000439518 MAP3K10Q02779 954 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms