RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 MEGF6O75095 1541 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 COL5A2P05997 1499 aaPredicted RBP8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 CYP27B1O15528 508 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 KCNQ3O43525 872 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 IL2RAP01589 272 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 ELNP15502 786 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 SCTRP47872 440 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 C4orf17Q53FE4 359 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 GNASQ5JWF2 1037 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 ZCRB1Q8TBF4 217 aaKnown RBP8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 EPS8L1Q8TE68 723 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 PRDM6Q9NQX0 595 aa8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 PARP4Q9UKK3 1724 aaKnown RBP8.91□□□□□ -0.98
HMGN1P6-201ENST00000438508 ERVV-2B6SEH9 535 aa8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 FLIIQ13045 1269 aa8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 HDGFL1Q5TGJ6 251 aa8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 TOM1L2Q6ZVM7 507 aa8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 NLRP8Q86W28 1048 aa8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 SIRT2Q8IXJ6 389 aa8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 ANKRD44Q8N8A2 993 aa8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 ZCCHC2Q9C0B9 1178 aaKnown RBP8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 FHDC1Q9C0D6 1143 aaPredicted RBP8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 DCTPP1Q9H773 170 aa8.9□□□□□ -0.98
HMGN1P6-201ENST00000438508 MRC1P22897 1456 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 KDM6AO15550 1401 aaPredicted RBP8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 COL14A1Q05707 1796 aaKnown RBP8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 IL2RBP14784 551 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 EVA1CP58658 441 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 NUCB1Q02818 461 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 FZD5Q13467 585 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 ZNF790Q6PG37 636 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 NFATC2IPQ8NCF5 419 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 XAGE2Q96GT9 111 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 MDFIQ99750 246 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 DBF4Q9UBU7 674 aaPredicted RBP8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 HCN2Q9UL51 889 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 PXDNLA1KZ92 1463 aa8.89□□□□□ -0.99
HMGN1P6-201ENST00000438508 IBTKQ9P2D0 1353 aaPredicted RBP8.88□□□□□ -0.99
HMGN1P6-201ENST00000438508 TOM1O60784 492 aa8.88□□□□□ -0.99
HMGN1P6-201ENST00000438508 C8orf34Q49A92 452 aa8.88□□□□□ -0.99
HMGN1P6-201ENST00000438508 ZNF468Q5VIY5 522 aaPredicted RBP8.88□□□□□ -0.99
HMGN1P6-201ENST00000438508 SKAP1Q86WV1 359 aa8.88□□□□□ -0.99
HMGN1P6-201ENST00000438508 PCDH11XQ9BZA7 1347 aa8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 PCDH11YQ9BZA8 1340 aa8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 GNAI3P08754 354 aa8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 RGS3P49796 1198 aa8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 TNP2Q05952 138 aa8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 FKBP5Q13451 457 aaPredicted RBP8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 LARP1Q6PKG0 1096 aaKnown RBP8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 PHAXQ9H814 394 aaKnown RBP8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 DDX21Q9NR30 783 aaKnown RBP eCLIP8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 POLR3EQ9NVU0 708 aa8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 HYPKQ9NX55 129 aa8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 RNF112Q9ULX5 631 aa8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 SHANK3Q9BYB0 1731 aa8.87□□□□□ -0.99
HMGN1P6-201ENST00000438508 ELOA3CA0A087WX78 387 aaPredicted RBP8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 ELOA3DA6NLF2 546 aaPredicted RBP8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 C9orf172C9J069 976 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 F6X3S4 739 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 SNRPA1P09661 255 aaKnown RBP8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 EIF2S2P20042 333 aaKnown RBP8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 CABP4P57796 275 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 ATP8B2P98198 1209 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 ADGRE1Q14246 886 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 ELOA3BQ3SY89 546 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 CEP85Q6P2H3 762 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 CHD1LQ86WJ1 897 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 ELOA3Q8NG57 546 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 C1orf216Q8TAB5 229 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 MEIS3Q99687 375 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 USP44Q9H0E7 712 aa8.86□□□□□ -0.99
HMGN1P6-201ENST00000438508 PHLPP1O60346 1717 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 COL16A1Q07092 1604 aaPredicted RBP8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 ALDH1L1O75891 902 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 GNAI2P04899 355 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 TRIM28Q13263 835 aaKnown RBP8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 BEND3Q5T5X7 828 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 TMEM214Q6NUQ4 689 aaKnown RBP8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 KSR2Q6VAB6 950 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 DNAAF4Q8WXU2 420 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 RAB6BQ9NRW1 208 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 BTG4Q9NY30 223 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 CHPF2Q9P2E5 772 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 ATP10DQ9P241 1426 aa8.85□□□□□ -0.99
HMGN1P6-201ENST00000438508 UBR2Q8IWV8 1755 aa8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 ATXN7O15265 892 aaPredicted RBP8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 HMMRO75330 724 aa8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 MAPTP10636 758 aaKnown RBP8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 SLC39A6Q13433 755 aa8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 SLC4A10Q6U841 1118 aa8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 RHBDD1Q8TEB9 315 aa8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 ZNF496Q96IT1 587 aaPredicted RBP8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 CDCA7Q9BWT1 371 aaPredicted RBP8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 SRCIN1Q9C0H9 1055 aa8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 C1orf115Q9H7X2 142 aa8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 HDAC5Q9UQL6 1122 aa8.84□□□□□ -0.99
HMGN1P6-201ENST00000438508 THRAP3Q9Y2W1 955 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms