RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 KCPQ6ZWJ8 1503 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 ANXA1P04083 346 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 ATP5JP18859 108 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 PSMA5P28066 241 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 RFX5P48382 616 aaPredicted RBP8.9□□□□□ -0.98
COL17A1-204ENST00000433822 CASP7P55210 303 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 CCDC173Q0VFZ6 552 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 NECTIN1Q15223 517 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 CWF19L2Q2TBE0 894 aaKnown RBP8.9□□□□□ -0.98
COL17A1-204ENST00000433822 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 PRPF38BQ5VTL8 546 aaKnown RBP8.9□□□□□ -0.98
COL17A1-204ENST00000433822 RNF20Q5VTR2 975 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 MCTP1Q6DN14 999 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 BARGINQ6ZT62 677 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 NFATC2IPQ8NCF5 419 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 XAGE3Q8WTP9 111 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 MAP4K1Q92918 833 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 SYAP1Q96A49 352 aaPredicted RBP8.9□□□□□ -0.98
COL17A1-204ENST00000433822 CARD10Q9BWT7 1032 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 ATP6V1DQ9Y5K8 247 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 THSD7AQ9UPZ6 1657 aa8.9□□□□□ -0.98
COL17A1-204ENST00000433822 CASZ1Q86V15 1759 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 CSB-PGBD3P0DP91 1061 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 ZKSCAN1P17029 563 aaPredicted RBP8.89□□□□□ -0.99
COL17A1-204ENST00000433822 GSK3AP49840 483 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 CABP4P57796 275 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 KRT32Q14532 448 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 ANKRD1Q15327 319 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 CSPP1Q1MSJ5 1256 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 USPL1Q5W0Q7 1092 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 COPS6Q7L5N1 327 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 AACSQ86V21 672 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 ANP32BQ92688 251 aaKnown RBP8.89□□□□□ -0.99
COL17A1-204ENST00000433822 EAF2Q96CJ1 260 aaPredicted RBP8.89□□□□□ -0.99
COL17A1-204ENST00000433822 TSEN34Q9BSV6 310 aaKnown RBP8.89□□□□□ -0.99
COL17A1-204ENST00000433822 GZF1Q9H116 711 aaPredicted RBP8.89□□□□□ -0.99
COL17A1-204ENST00000433822 IL25Q9H293 177 aa8.89□□□□□ -0.99
COL17A1-204ENST00000433822 TJP1Q07157 1748 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 PALLDQ8WX93 1383 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 PRAMEF22A3QJZ6 481 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 H7C1W4 665 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 PTPN12Q05209 780 aaKnown RBP8.88□□□□□ -0.99
COL17A1-204ENST00000433822 TRIM28Q13263 835 aaKnown RBP8.88□□□□□ -0.99
COL17A1-204ENST00000433822 PKP1Q13835 747 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 ZSCAN23Q3MJ62 389 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 GAS2L3Q86XJ1 694 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 VSIG10Q8N0Z9 540 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 TMEM151AQ8N4L1 468 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 CCDC191Q8NCU4 936 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 ARMC2Q8NEN0 867 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.88□□□□□ -0.99
COL17A1-204ENST00000433822 TEX13AQ9BXU3 409 aaPredicted RBP8.88□□□□□ -0.99
COL17A1-204ENST00000433822 DNMT3LQ9UJW3 386 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 CYP46A1Q9Y6A2 500 aa8.88□□□□□ -0.99
COL17A1-204ENST00000433822 GOLGB1Q14789 3259 aaKnown RBP8.88□□□□□ -0.99
COL17A1-204ENST00000433822 ABCC12Q96J65 1359 aa8.87□□□□□ -0.99
COL17A1-204ENST00000433822 RNF225M0QZC1 329 aaPredicted RBP8.87□□□□□ -0.99
COL17A1-204ENST00000433822 CIAO1O76071 339 aa8.87□□□□□ -0.99
COL17A1-204ENST00000433822 LETM1O95202 739 aaPredicted RBP8.87□□□□□ -0.99
COL17A1-204ENST00000433822 IL2RBP14784 551 aa8.87□□□□□ -0.99
COL17A1-204ENST00000433822 AK2P54819 239 aa8.87□□□□□ -0.99
COL17A1-204ENST00000433822 SLC39A6Q13433 755 aa8.87□□□□□ -0.99
COL17A1-204ENST00000433822 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.87□□□□□ -0.99
COL17A1-204ENST00000433822 CWC27Q6UX04 472 aaKnown RBP8.87□□□□□ -0.99
COL17A1-204ENST00000433822 RUFY3Q7L099 469 aa8.87□□□□□ -0.99
COL17A1-204ENST00000433822 ZCRB1Q8TBF4 217 aaKnown RBP8.87□□□□□ -0.99
COL17A1-204ENST00000433822 MYD88Q99836 296 aa8.87□□□□□ -0.99
COL17A1-204ENST00000433822 UPF3BQ9BZI7 483 aaKnown RBP8.87□□□□□ -0.99
COL17A1-204ENST00000433822 PA2G4Q9UQ80 394 aaKnown RBP8.87□□□□□ -0.99
COL17A1-204ENST00000433822 MAP4K5Q9Y4K4 846 aa8.87□□□□□ -0.99
COL17A1-204ENST00000433822 USP16Q9Y5T5 823 aa8.87□□□□□ -0.99
COL17A1-204ENST00000433822 SH3TC1Q8TE82 1336 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 ZMYND10O75800 440 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 GDF11O95390 407 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 PDCP20941 246 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 NASPP49321 788 aaPredicted RBP8.86□□□□□ -0.99
COL17A1-204ENST00000433822 RASSF7Q02833 373 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 VPS72Q15906 364 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 TNNI3KQ59H18 835 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 CREB3L3Q68CJ9 461 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 LRSAM1Q6UWE0 723 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 FAM184AQ8NB25 1140 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 CHMP4CQ96CF2 233 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 PDLIM2Q96JY6 352 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 CAMKK2Q96RR4 588 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 HAUS7Q99871 368 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 C1QTNF2Q9BXJ5 285 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 CCDC9Q9Y3X0 531 aaKnown RBP8.86□□□□□ -0.99
COL17A1-204ENST00000433822 RBM8AQ9Y5S9 174 aaKnown RBP8.86□□□□□ -0.99
COL17A1-204ENST00000433822 FPGT-TNNI3KV9GXZ4 949 aa8.86□□□□□ -0.99
COL17A1-204ENST00000433822 PRPF40AO75400 957 aaKnown RBP8.85□□□□□ -0.99
COL17A1-204ENST00000433822 ZSCAN22P10073 491 aaPredicted RBP8.85□□□□□ -0.99
COL17A1-204ENST00000433822 NCLP19338 710 aaKnown RBP8.85□□□□□ -0.99
COL17A1-204ENST00000433822 FSHRP23945 695 aa8.85□□□□□ -0.99
COL17A1-204ENST00000433822 PTH1RQ03431 593 aa8.85□□□□□ -0.99
COL17A1-204ENST00000433822 AIMP1Q12904 312 aaKnown RBP8.85□□□□□ -0.99
COL17A1-204ENST00000433822 CAVIN1Q6NZI2 390 aaKnown RBP8.85□□□□□ -0.99
COL17A1-204ENST00000433822 GPT2Q8TD30 523 aa8.85□□□□□ -0.99
COL17A1-204ENST00000433822 CNTNAP3BQ96NU0 1288 aa8.85□□□□□ -0.99
COL17A1-204ENST00000433822 PLA2G12BQ9BX93 195 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms