RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 MSL1Q68DK7 614 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 KCNH5Q8NCM2 988 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 ARMC5Q96C12 935 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 RNPC3Q96LT9 517 aaKnown RBP7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 NEUROD4Q9HD90 331 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 NRBP1Q9UHY1 535 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 MRVI1Q9Y6F6 885 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 CPSF1Q10570 1443 aaKnown RBP7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 ACEP12821 1306 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 ZNF521Q96K83 1311 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 WDR78Q5VTH9 848 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 SPC25Q9HBM1 224 aa7.6□□□□□ -1.19
NIPAL3-205ENST00000432012 IL2RBP14784 551 aa7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 WDR43Q15061 677 aaKnown RBP eCLIP7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 MAP7D1Q3KQU3 841 aa7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 DESI1Q6ICB0 168 aa7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 POTEEQ6S8J3 1075 aa7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 BCS1LQ9Y276 419 aa7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 C5P01031 1676 aa7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 ANKRD36BQ8N2N9 1353 aa7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 EPB41L2O43491 1005 aaKnown RBP7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 ATF4P18848 351 aaPredicted RBP7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 SFMBT1Q9UHJ3 866 aa7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 NAP1L2Q9ULW6 460 aaPredicted RBP7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 ERBB3P21860 1342 aa7.59□□□□□ -1.19
NIPAL3-205ENST00000432012 HOXB1P14653 301 aaPredicted RBP7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 MORN1Q5T089 497 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 ZNF512BQ96KM6 892 aaPredicted RBP7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 KIAA1551Q9HCM1 1747 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 FAM221BA6H8Z2 402 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 PPP2R1AP30153 589 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 TBCELQ5QJ74 424 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 PI16Q6UXB8 463 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 OTUD5Q96G74 571 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 COPRSQ9NQ92 184 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 FRAT2O75474 233 aaPredicted RBP7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 PDGFRBP09619 1106 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 NPR3P17342 541 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 ORC1Q13415 861 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 C10orf62Q5T681 223 aaPredicted RBP7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 ZNF408Q9H9D4 720 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 RNF181Q9P0P0 153 aa7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 FBXO9Q9UK97 447 aaPredicted RBP7.58□□□□□ -1.2
NIPAL3-205ENST00000432012 FAM13AO94988 1023 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 PPP4CP60510 307 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 PAK2Q13177 524 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 GLIPR1L2Q4G1C9 344 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 RINLQ6ZS11 566 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 PRC1O43663 620 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 LDHAP00338 332 aaKnown RBP7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 RGS3P49796 1198 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 SLFN5Q08AF3 891 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 ANKRD13DQ6ZTN6 518 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 CREBRFQ8IUR6 639 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 TCEAL9Q9UHQ7 104 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 GGT7Q9UJ14 662 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 KNSTRNQ9Y448 316 aa7.57□□□□□ -1.2
NIPAL3-205ENST00000432012 MAGEB6P1A0A0J9YX57 407 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 GLTPD2A6NH11 291 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 TTC39BQ5VTQ0 682 aaPredicted RBP7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 SAMD7Q7Z3H4 446 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 ARHGEF25Q86VW2 580 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 PGBD3Q8N328 593 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 SCG3Q8WXD2 468 aaKnown RBP7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 MARVELD3Q96A59 401 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 BRCA1P38398 1863 aaKnown RBP7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 EIF3JO75822 258 aaKnown RBP7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 SERINC3Q13530 473 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 CRELD1Q96HD1 420 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 SRPK1Q96SB4 655 aaKnown RBP7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 FAM129BQ96TA1 746 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 ARPC5LQ9BPX5 153 aa7.56□□□□□ -1.2
NIPAL3-205ENST00000432012 ADGRB1O14514 1584 aa7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 XRCC5P13010 732 aaKnown RBP7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 GNA15P30679 374 aa7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 SCTRP47872 440 aa7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 DHX8Q14562 1220 aaKnown RBP7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 TRMT2AQ8IZ69 625 aaKnown RBP7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 V9GY48 417 aaPredicted RBP7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 A6NHS1 94 aa7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 MYBPC2Q14324 1141 aa7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 VARS2Q5ST30 1063 aaKnown RBP7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 PODNQ7Z5L7 613 aa7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 DCAF5Q96JK2 942 aa7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 TSPAN10Q9H1Z9 355 aaPredicted RBP7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 LRFN2Q9ULH4 789 aa7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 RGPD5Q99666 1765 aa7.55□□□□□ -1.2
NIPAL3-205ENST00000432012 CA12O43570 354 aa7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 DNAJC6O75061 913 aa7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 PTCD1O75127 700 aaKnown RBP7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 ETFBP38117 255 aa7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 DMRTA1Q5VZB9 504 aa7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 GET4Q7L5D6 327 aaPredicted RBP7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 MRFAP1L1Q96HT8 127 aa7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 ZBED2Q9BTP6 218 aa7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 TAF1LQ8IZX4 1826 aa7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 DOT1LQ8TEK3 1739 aa7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 N4BP2Q86UW6 1770 aaPredicted RBP7.54□□□□□ -1.2
NIPAL3-205ENST00000432012 ESPNB1AK53 854 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms