RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 PGBD1Q96JS3 809 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 CNNM2Q9H8M5 875 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
CLDN4-202ENST00000431918 PALLDQ8WX93 1383 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
CLDN4-202ENST00000431918 SERPINC1P01008 464 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 KRT40Q6A162 431 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 TPTE2Q6XPS3 522 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 ESR2Q92731 530 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 HOOK1Q9UJC3 728 aaKnown RBP13.19□□□□□ -0.3
CLDN4-202ENST00000431918 KCNJ14Q9UNX9 436 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 UBN2Q6ZU65 1347 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 COL15A1P39059 1388 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 TPM3P06753 285 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 SYKP43405 635 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 HS1BP3Q53T59 392 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 LCORLQ8N3X6 602 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 CLIC4Q9Y696 253 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 TSPY2A6NKD2 308 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 FAM160A1Q05DH4 1040 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 CATIPQ7Z7H3 387 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 CNNM3Q8NE01 707 aa13.19□□□□□ -0.3
CLDN4-202ENST00000431918 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
CLDN4-202ENST00000431918 NOLC1Q14978 699 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLDN4-202ENST00000431918 AKNAD1Q5T1N1 836 aa13.18□□□□□ -0.3
CLDN4-202ENST00000431918 MKNK2Q9HBH9 465 aa13.18□□□□□ -0.3
CLDN4-202ENST00000431918 AATFQ9NY61 560 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLDN4-202ENST00000431918 ITPK1Q13572 414 aa13.18□□□□□ -0.3
CLDN4-202ENST00000431918 IFIT1BQ5T764 474 aaKnown RBP13.18□□□□□ -0.3
CLDN4-202ENST00000431918 MYSM1Q5VVJ2 828 aa13.18□□□□□ -0.3
CLDN4-202ENST00000431918 C16orf45Q96MC5 204 aaPredicted RBP13.18□□□□□ -0.3
CLDN4-202ENST00000431918 CDHR2Q9BYE9 1310 aa13.18□□□□□ -0.3
CLDN4-202ENST00000431918 ANO1Q5XXA6 986 aa13.18□□□□□ -0.3
CLDN4-202ENST00000431918 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
CLDN4-202ENST00000431918 CTCFLQ8NI51 663 aaPredicted RBP13.18□□□□□ -0.3
CLDN4-202ENST00000431918 TMEM87BQ96K49 555 aa13.18□□□□□ -0.3
CLDN4-202ENST00000431918 OFD1O75665 1012 aa13.17□□□□□ -0.3
CLDN4-202ENST00000431918 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLDN4-202ENST00000431918 PCDHA7Q9UN72 937 aa13.17□□□□□ -0.3
CLDN4-202ENST00000431918 MRVI1Q9Y6F6 885 aa13.17□□□□□ -0.3
CLDN4-202ENST00000431918 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
CLDN4-202ENST00000431918 EXOSC10Q01780 885 aaKnown RBP13.17□□□□□ -0.3
CLDN4-202ENST00000431918 APOA5Q6Q788 366 aa13.17□□□□□ -0.3
CLDN4-202ENST00000431918 CYB5R4Q7L1T6 521 aa13.17□□□□□ -0.3
CLDN4-202ENST00000431918 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
CLDN4-202ENST00000431918 STRBPQ96SI9 672 aaKnown RBP13.17□□□□□ -0.3
CLDN4-202ENST00000431918 TRMT1Q9NXH9 659 aaKnown RBP13.17□□□□□ -0.3
CLDN4-202ENST00000431918 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
CLDN4-202ENST00000431918 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
CLDN4-202ENST00000431918 GNAT2P19087 354 aa13.17□□□□□ -0.3
CLDN4-202ENST00000431918 HOMER1Q86YM7 354 aa13.17□□□□□ -0.3
CLDN4-202ENST00000431918 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 RPS8P62241 208 aaKnown RBP13.16□□□□□ -0.3
CLDN4-202ENST00000431918 KLHL10Q6JEL2 608 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 BRAPQ7Z569 592 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 PLA2G12BQ9BX93 195 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 ZSWIM5Q9P217 1185 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 ELP1O95163 1332 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 LMOD1P29536 600 aaPredicted RBP13.16□□□□□ -0.3
CLDN4-202ENST00000431918 DYNLL1P63167 89 aaKnown RBP13.16□□□□□ -0.3
CLDN4-202ENST00000431918 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 MCM9Q9NXL9 1143 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 RFX7Q2KHR2 1363 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 CTDNEP1O95476 244 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 CFAP100Q494V2 611 aa13.16□□□□□ -0.3
CLDN4-202ENST00000431918 HIBADHP31937 336 aaKnown RBP13.15□□□□□ -0.3
CLDN4-202ENST00000431918 CRNKL1Q9BZJ0 848 aaKnown RBP13.15□□□□□ -0.3
CLDN4-202ENST00000431918 USP21Q9UK80 565 aa13.15□□□□□ -0.3
CLDN4-202ENST00000431918 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
CLDN4-202ENST00000431918 MB21D2Q8IYB1 491 aaPredicted RBP13.15□□□□□ -0.3
CLDN4-202ENST00000431918 DIS3L2Q8IYB7 885 aaKnown RBP13.15□□□□□ -0.3
CLDN4-202ENST00000431918 ZNF34Q8IZ26 560 aa13.15□□□□□ -0.3
CLDN4-202ENST00000431918 TCHHQ07283 1943 aa13.15□□□□□ -0.3
CLDN4-202ENST00000431918 PPP4R3BQ5MIZ7 849 aa13.15□□□□□ -0.3
CLDN4-202ENST00000431918 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.3
CLDN4-202ENST00000431918 NEDD4P46934 1319 aa13.15□□□□□ -0.3
CLDN4-202ENST00000431918 USP17L12C9JPN9 530 aa13.15□□□□□ -0.31
CLDN4-202ENST00000431918 USP17L21D6R901 530 aa13.15□□□□□ -0.31
CLDN4-202ENST00000431918 NDUFA8P51970 172 aa13.15□□□□□ -0.31
CLDN4-202ENST00000431918 PPARAQ07869 468 aa13.15□□□□□ -0.31
CLDN4-202ENST00000431918 SMARCC2Q8TAQ2 1214 aa13.15□□□□□ -0.31
CLDN4-202ENST00000431918 NYXQ9GZU5 481 aa13.15□□□□□ -0.31
CLDN4-202ENST00000431918 SENP2Q9HC62 589 aa13.15□□□□□ -0.31
CLDN4-202ENST00000431918 NLRP5P59047 1200 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 FAM47AQ5JRC9 791 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 IPO4Q8TEX9 1081 aaKnown RBP13.14□□□□□ -0.31
CLDN4-202ENST00000431918 CABP5Q9NP86 173 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 BTBD18B2RXH4 712 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 ZNF202O95125 648 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 CELF1Q92879 486 aaKnown RBP13.14□□□□□ -0.31
CLDN4-202ENST00000431918 PDLIM2Q96JY6 352 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 CLIC6Q96NY7 704 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 ALDH8A1Q9H2A2 487 aaPredicted RBP13.14□□□□□ -0.31
CLDN4-202ENST00000431918 RCOR1Q9UKL0 485 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 F8W031 263 aaPredicted RBP13.14□□□□□ -0.31
CLDN4-202ENST00000431918 MARCH6O60337 910 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 CBX1P83916 185 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 TMC6Q7Z403 805 aa13.14□□□□□ -0.31
CLDN4-202ENST00000431918 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms