RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
TSPAN9-203ENST00000431374 COL13A1Q5TAT6 717 aaPredicted RBP18.79■□□□□ 0.6
TSPAN9-203ENST00000431374 TBC1D9Q6ZT07 1266 aa18.79■□□□□ 0.6
TSPAN9-203ENST00000431374 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
TSPAN9-203ENST00000431374 FAM163AQ96GL9 167 aaPredicted RBP18.79■□□□□ 0.6
TSPAN9-203ENST00000431374 CCDC8Q9H0W5 538 aaPredicted RBP18.79■□□□□ 0.6
TSPAN9-203ENST00000431374 MECOMQ03112 1051 aa18.78■□□□□ 0.6
TSPAN9-203ENST00000431374 SLF2Q8IX21 1173 aa18.78■□□□□ 0.6
TSPAN9-203ENST00000431374 RHPN1Q8TCX5 695 aa18.78■□□□□ 0.6
TSPAN9-203ENST00000431374 ZNF384Q8TF68 577 aa18.78■□□□□ 0.6
TSPAN9-203ENST00000431374 ECM29Q5VYK3 1845 aa18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 UNCXA6NJT0 531 aa18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 CA12O43570 354 aa18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 USP2O75604 605 aaPredicted RBP18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 IREB2P48200 963 aaKnown RBP18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 NFIAQ12857 509 aa18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 AACSQ86V21 672 aa18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 PRDM10Q9NQV6 1147 aa18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 SNRKQ9NRH2 765 aa18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 USP40Q9NVE5 1235 aa18.77■□□□□ 0.6
TSPAN9-203ENST00000431374 MROH7-TTC4A0A0A0MT08 1334 aa18.76■□□□□ 0.59
TSPAN9-203ENST00000431374 RAB11FIP3O75154 756 aa18.76■□□□□ 0.59
TSPAN9-203ENST00000431374 LBX1P52954 281 aa18.76■□□□□ 0.59
TSPAN9-203ENST00000431374 NSUN4Q96CB9 384 aaKnown RBP18.76■□□□□ 0.59
TSPAN9-203ENST00000431374 KIF1BPQ96EK5 621 aa18.76■□□□□ 0.59
TSPAN9-203ENST00000431374 CLMNQ96JQ2 1002 aa18.76■□□□□ 0.59
TSPAN9-203ENST00000431374 CSRNP1Q96S65 589 aa18.76■□□□□ 0.59
TSPAN9-203ENST00000431374 IL1RAPL2Q9NP60 686 aa18.76■□□□□ 0.59
TSPAN9-203ENST00000431374 RPAP1Q9BWH6 1393 aaPredicted RBP18.76■□□□□ 0.59
TSPAN9-203ENST00000431374 APBB1O00213 710 aa18.75■□□□□ 0.59
TSPAN9-203ENST00000431374 BTDP43251 543 aa18.75■□□□□ 0.59
TSPAN9-203ENST00000431374 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
TSPAN9-203ENST00000431374 FAM151AQ8WW52 585 aa18.75■□□□□ 0.59
TSPAN9-203ENST00000431374 RAI14Q9P0K7 980 aa18.75■□□□□ 0.59
TSPAN9-203ENST00000431374 FAM198AQ9UFP1 575 aa18.75■□□□□ 0.59
TSPAN9-203ENST00000431374 MYH13Q9UKX3 1938 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 RFX7Q2KHR2 1363 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 GPR75-ASB3A0A0A6YYF3 556 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 CYP2E1P05181 493 aaPredicted RBP18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 ZAP70P43403 619 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 GSTO1P78417 241 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 MKRN3Q13064 507 aaKnown RBP18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 SPRYD7Q5W111 196 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 ANKRD13AQ8IZ07 590 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 SLC10A4Q96EP9 437 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 IDI2Q9BXS1 227 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 LRP2BPQ9P2M1 347 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 TSKSQ9UJT2 592 aa18.74■□□□□ 0.59
TSPAN9-203ENST00000431374 TCP10Q12799 353 aa18.73■□□□□ 0.59
TSPAN9-203ENST00000431374 CLASRPQ8N2M8 674 aaKnown RBP18.73■□□□□ 0.59
TSPAN9-203ENST00000431374 PIH1D3Q9NQM4 214 aaKnown RBP18.73■□□□□ 0.59
TSPAN9-203ENST00000431374 WDHD1O75717 1129 aaPredicted RBP18.72■□□□□ 0.59
TSPAN9-203ENST00000431374 LDHCP07864 332 aa18.72■□□□□ 0.59
TSPAN9-203ENST00000431374 RHBDL3P58872 404 aa18.72■□□□□ 0.59
TSPAN9-203ENST00000431374 ZFPM1Q8IX07 1006 aa18.72■□□□□ 0.59
TSPAN9-203ENST00000431374 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.72■□□□□ 0.59
TSPAN9-203ENST00000431374 HOOK2Q96ED9 719 aa18.72■□□□□ 0.59
TSPAN9-203ENST00000431374 WNK4Q96J92 1243 aa18.72■□□□□ 0.59
TSPAN9-203ENST00000431374 RNF186Q9NXI6 227 aa18.72■□□□□ 0.59
TSPAN9-203ENST00000431374 SAGE1Q9NXZ1 904 aa18.72■□□□□ 0.59
TSPAN9-203ENST00000431374 IGSF3O75054 1194 aa18.71■□□□□ 0.59
TSPAN9-203ENST00000431374 ENTPD3O75355 529 aa18.71■□□□□ 0.59
TSPAN9-203ENST00000431374 RGS3P49796 1198 aa18.71■□□□□ 0.59
TSPAN9-203ENST00000431374 MAP3K9P80192 1104 aa18.71■□□□□ 0.59
TSPAN9-203ENST00000431374 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.71■□□□□ 0.59
TSPAN9-203ENST00000431374 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.71■□□□□ 0.59
TSPAN9-203ENST00000431374 MAP4K4O95819 1239 aaPredicted RBP18.7■□□□□ 0.58
TSPAN9-203ENST00000431374 IFIT2P09913 472 aaKnown RBP18.7■□□□□ 0.58
TSPAN9-203ENST00000431374 ZBTB48P10074 688 aaPredicted RBP18.7■□□□□ 0.58
TSPAN9-203ENST00000431374 GJA5P36382 358 aa18.7■□□□□ 0.58
TSPAN9-203ENST00000431374 VGLL4Q14135 290 aa18.7■□□□□ 0.58
TSPAN9-203ENST00000431374 DCAF15Q66K64 600 aa18.7■□□□□ 0.58
TSPAN9-203ENST00000431374 ELP3Q9H9T3 547 aa18.7■□□□□ 0.58
TSPAN9-203ENST00000431374 DDX4Q9NQI0 724 aaKnown RBP18.7■□□□□ 0.58
TSPAN9-203ENST00000431374 TM4SF4P48230 202 aa18.69■□□□□ 0.58
TSPAN9-203ENST00000431374 SREBF2Q12772 1141 aa18.69■□□□□ 0.58
TSPAN9-203ENST00000431374 NAA16Q6N069 864 aaPredicted RBP18.69■□□□□ 0.58
TSPAN9-203ENST00000431374 WRNIP1Q96S55 665 aa18.69■□□□□ 0.58
TSPAN9-203ENST00000431374 ZNF341Q9BYN7 854 aa18.69■□□□□ 0.58
TSPAN9-203ENST00000431374 NDUFB9Q9Y6M9 179 aa18.69■□□□□ 0.58
TSPAN9-203ENST00000431374 ATRNL1Q5VV63 1379 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 NPM3O75607 178 aaKnown RBP18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 TRPA1O75762 1119 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 PICALMQ13492 652 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 MIGA2Q7L4E1 593 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 SH3BP5LQ7L8J4 393 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 TNS4Q8IZW8 715 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 CRBNQ96SW2 442 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 DCTPP1Q9H773 170 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 CSADQ9Y600 493 aa18.68■□□□□ 0.58
TSPAN9-203ENST00000431374 MANSC4A6NHS7 340 aaPredicted RBP18.67■□□□□ 0.58
TSPAN9-203ENST00000431374 ADGRA1Q86SQ6 560 aa18.67■□□□□ 0.58
TSPAN9-203ENST00000431374 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.67■□□□□ 0.58
TSPAN9-203ENST00000431374 OPTNQ96CV9 577 aa18.67■□□□□ 0.58
TSPAN9-203ENST00000431374 BCL11AQ9H165 835 aa18.67■□□□□ 0.58
TSPAN9-203ENST00000431374 ANTXR1Q9H6X2 564 aa18.67■□□□□ 0.58
TSPAN9-203ENST00000431374 SNCAIPQ9Y6H5 919 aa18.67■□□□□ 0.58
TSPAN9-203ENST00000431374 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms