RNA–Protein interactions for RNA: ENST00000430293.1

POLR1B-206, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-206ENST00000430293 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.32■□□□□ 0.04
POLR1B-206ENST00000430293 DENND2AQ9ULE3 1009 aa15.32■□□□□ 0.04
POLR1B-206ENST00000430293 MYH2Q9UKX2 1941 aa15.32■□□□□ 0.04
POLR1B-206ENST00000430293 CEP290O15078 2479 aa15.32■□□□□ 0.04
POLR1B-206ENST00000430293 FKBP1CQ5VVH2 108 aa15.31■□□□□ 0.04
POLR1B-206ENST00000430293 FBXO46Q6PJ61 603 aaPredicted RBP15.31■□□□□ 0.04
POLR1B-206ENST00000430293 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.31■□□□□ 0.04
POLR1B-206ENST00000430293 FAM83AQ86UY5 434 aa15.31■□□□□ 0.04
POLR1B-206ENST00000430293 SSH3Q8TE77 659 aa15.31■□□□□ 0.04
POLR1B-206ENST00000430293 ZNF384Q8TF68 577 aa15.31■□□□□ 0.04
POLR1B-206ENST00000430293 GCC1Q96CN9 775 aa15.31■□□□□ 0.04
POLR1B-206ENST00000430293 CFHR5Q9BXR6 569 aa15.31■□□□□ 0.04
POLR1B-206ENST00000430293 R3HDMLQ9H3Y0 253 aa15.31■□□□□ 0.04
POLR1B-206ENST00000430293 GNL3LQ9NVN8 582 aaKnown RBP15.31■□□□□ 0.04
POLR1B-206ENST00000430293 GAKO14976 1311 aa15.31■□□□□ 0.04
POLR1B-206ENST00000430293 GPR25O00155 361 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 IGF2BP3O00425 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
POLR1B-206ENST00000430293 IREB2P48200 963 aaKnown RBP15.3■□□□□ 0.04
POLR1B-206ENST00000430293 TNNI2P48788 182 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 SREBF2Q12772 1141 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 NFIAQ12857 509 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 VGLL4Q14135 290 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 CDC42EP5Q6NZY7 148 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 MAST2Q6P0Q8 1798 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 PI16Q6UXB8 463 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 ITPRIPQ8IWB1 547 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 FTSJ3Q8IY81 847 aaKnown RBP15.3■□□□□ 0.04
POLR1B-206ENST00000430293 ANKRD13AQ8IZ07 590 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 DOCK2Q92608 1830 aa15.3■□□□□ 0.04
POLR1B-206ENST00000430293 ATRNL1Q5VV63 1379 aa15.29■□□□□ 0.04
POLR1B-206ENST00000430293 LDHBP07195 334 aaKnown RBP15.29■□□□□ 0.04
POLR1B-206ENST00000430293 ARID4AP29374 1257 aaPredicted RBP15.29■□□□□ 0.04
POLR1B-206ENST00000430293 ATP8B2P98198 1209 aa15.29■□□□□ 0.04
POLR1B-206ENST00000430293 SLC10A4Q96EP9 437 aa15.29■□□□□ 0.04
POLR1B-206ENST00000430293 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
POLR1B-206ENST00000430293 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
POLR1B-206ENST00000430293 AKAP2Q9Y2D5 859 aa15.29■□□□□ 0.04
POLR1B-206ENST00000430293 MANSC4A6NHS7 340 aaPredicted RBP15.28■□□□□ 0.04
POLR1B-206ENST00000430293 MVPQ14764 893 aaKnown RBP15.28■□□□□ 0.04
POLR1B-206ENST00000430293 IFNL1Q8IU54 200 aa15.28■□□□□ 0.04
POLR1B-206ENST00000430293 PANK1Q8TE04 598 aa15.28■□□□□ 0.04
POLR1B-206ENST00000430293 HMG20BQ9P0W2 317 aa15.28■□□□□ 0.04
POLR1B-206ENST00000430293 SNCAIPQ9Y6H5 919 aa15.28■□□□□ 0.04
POLR1B-206ENST00000430293 TESPA1A2RU30 521 aaPredicted RBP15.27■□□□□ 0.04
POLR1B-206ENST00000430293 CEP85Q6P2H3 762 aa15.27■□□□□ 0.04
POLR1B-206ENST00000430293 FAM151AQ8WW52 585 aa15.27■□□□□ 0.04
POLR1B-206ENST00000430293 OPTNQ96CV9 577 aa15.27■□□□□ 0.04
POLR1B-206ENST00000430293 MS4A4AQ96JQ5 239 aa15.27■□□□□ 0.04
POLR1B-206ENST00000430293 PTPN18Q99952 460 aa15.27■□□□□ 0.04
POLR1B-206ENST00000430293 TMOD2Q9NZR1 351 aa15.27■□□□□ 0.04
POLR1B-206ENST00000430293 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.27■□□□□ 0.04
POLR1B-206ENST00000430293 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.04
POLR1B-206ENST00000430293 LAMA3Q16787 3333 aa15.27■□□□□ 0.03
POLR1B-206ENST00000430293 TRIOBPQ9H2D6 2365 aa15.26■□□□□ 0.03
POLR1B-206ENST00000430293 POTEFA5A3E0 1075 aa15.26■□□□□ 0.03
POLR1B-206ENST00000430293 MCAMP43121 646 aa15.26■□□□□ 0.03
POLR1B-206ENST00000430293 FXR1P51114 621 aaKnown RBP eCLIP15.26■□□□□ 0.03
POLR1B-206ENST00000430293 MAP3K9P80192 1104 aa15.26■□□□□ 0.03
POLR1B-206ENST00000430293 G3BP1Q13283 466 aaKnown RBP eCLIP15.26■□□□□ 0.03
POLR1B-206ENST00000430293 TNNI3KQ59H18 835 aa15.26■□□□□ 0.03
POLR1B-206ENST00000430293 ZFPM1Q8IX07 1006 aa15.26■□□□□ 0.03
POLR1B-206ENST00000430293 ZGPATQ8N5A5 531 aaKnown RBP15.26■□□□□ 0.03
POLR1B-206ENST00000430293 NEUROD6Q96NK8 337 aa15.26■□□□□ 0.03
POLR1B-206ENST00000430293 GPR108Q9NPR9 543 aa15.26■□□□□ 0.03
POLR1B-206ENST00000430293 FPGT-TNNI3KV9GXZ4 949 aa15.26■□□□□ 0.03
POLR1B-206ENST00000430293 MYO5AQ9Y4I1 1855 aaKnown RBP15.25■□□□□ 0.03
POLR1B-206ENST00000430293 SPDYE5A6NIY4 337 aa15.25■□□□□ 0.03
POLR1B-206ENST00000430293 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
POLR1B-206ENST00000430293 FAM163AQ96GL9 167 aaPredicted RBP15.25■□□□□ 0.03
POLR1B-206ENST00000430293 DBNDD2Q9BQY9 259 aa15.25■□□□□ 0.03
POLR1B-206ENST00000430293 USP40Q9NVE5 1235 aa15.25■□□□□ 0.03
POLR1B-206ENST00000430293 TLR7Q9NYK1 1049 aaKnown RBP15.25■□□□□ 0.03
POLR1B-206ENST00000430293 ABCF2Q9UG63 623 aa15.25■□□□□ 0.03
POLR1B-206ENST00000430293 MROH7-TTC4A0A0A0MT08 1334 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 FKTNO75072 461 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 SURF6O75683 361 aaKnown RBP15.24■□□□□ 0.03
POLR1B-206ENST00000430293 WDHD1O75717 1129 aaPredicted RBP15.24■□□□□ 0.03
POLR1B-206ENST00000430293 BTDP43251 543 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 MECOMQ03112 1051 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 TCP10Q12799 353 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 TBC1D9Q6ZT07 1266 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 SH3BP5LQ7L8J4 393 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 DZIP1Q86YF9 867 aaKnown RBP15.24■□□□□ 0.03
POLR1B-206ENST00000430293 BRI3BPQ8WY22 251 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 ZKSCAN4Q969J2 545 aaPredicted RBP15.24■□□□□ 0.03
POLR1B-206ENST00000430293 WRNIP1Q96S55 665 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 IDI2Q9BXS1 227 aa15.24■□□□□ 0.03
POLR1B-206ENST00000430293 DDX4Q9NQI0 724 aaKnown RBP15.24■□□□□ 0.03
POLR1B-206ENST00000430293 SIPA1L1O43166 1804 aa15.23■□□□□ 0.03
POLR1B-206ENST00000430293 INPP5BP32019 993 aa15.23■□□□□ 0.03
POLR1B-206ENST00000430293 RGS3P49796 1198 aa15.23■□□□□ 0.03
POLR1B-206ENST00000430293 INHBEP58166 350 aa15.23■□□□□ 0.03
POLR1B-206ENST00000430293 RHBDL3P58872 404 aa15.23■□□□□ 0.03
POLR1B-206ENST00000430293 MIGA2Q7L4E1 593 aa15.23■□□□□ 0.03
POLR1B-206ENST00000430293 NSUN4Q96CB9 384 aaKnown RBP15.23■□□□□ 0.03
POLR1B-206ENST00000430293 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
POLR1B-206ENST00000430293 ZNF112Q9UJU3 913 aa15.23■□□□□ 0.03
POLR1B-206ENST00000430293 DBNLQ9UJU6 430 aaKnown RBP15.23■□□□□ 0.03
POLR1B-206ENST00000430293 CDK5RAP2Q96SN8 1893 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms