RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SOX10P56693 466 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 TIMM10P62072 90 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 DIEXFQ68CQ4 756 aaKnown RBP14.67□□□□□ -0.06
HDAC4-202ENST00000430200 CDC42EP5Q6NZY7 148 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 HHIPL2Q6UWX4 724 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 ANKRD13AQ8IZ07 590 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 MS4A4AQ96JQ5 239 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 CEP126Q9P2H0 1117 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 LOC285556D6RIA3 1793 aa14.67□□□□□ -0.06
HDAC4-202ENST00000430200 MAST3O60307 1309 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 A0A1B0GUL7 405 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 MANSC4A6NHS7 340 aaPredicted RBP14.66□□□□□ -0.06
HDAC4-202ENST00000430200 RGS19P49795 217 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 CRHR2Q13324 411 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 ZFPM1Q8IX07 1006 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 WDR66Q8TBY9 1149 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 BRI3BPQ8WY22 251 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 C1orf115Q9H7X2 142 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 FAM198AQ9UFP1 575 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 HPS5Q9UPZ3 1129 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 SUGT1Q9Y2Z0 365 aa14.66□□□□□ -0.06
HDAC4-202ENST00000430200 GNAI3P08754 354 aa14.65□□□□□ -0.06
HDAC4-202ENST00000430200 NOM1Q5C9Z4 860 aaKnown RBP14.65□□□□□ -0.06
HDAC4-202ENST00000430200 FAM83AQ86UY5 434 aa14.65□□□□□ -0.06
HDAC4-202ENST00000430200 ZKSCAN4Q969J2 545 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-202ENST00000430200 OTUD5Q96G74 571 aa14.65□□□□□ -0.06
HDAC4-202ENST00000430200 GAKO14976 1311 aa14.65□□□□□ -0.06
HDAC4-202ENST00000430200 TESPA1A2RU30 521 aaPredicted RBP14.64□□□□□ -0.07
HDAC4-202ENST00000430200 INPP5BP32019 993 aa14.64□□□□□ -0.07
HDAC4-202ENST00000430200 TNNI2P48788 182 aa14.64□□□□□ -0.07
HDAC4-202ENST00000430200 TCP10Q12799 353 aa14.64□□□□□ -0.07
HDAC4-202ENST00000430200 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
HDAC4-202ENST00000430200 XAGE2Q96GT9 111 aa14.64□□□□□ -0.07
HDAC4-202ENST00000430200 WRNIP1Q96S55 665 aa14.64□□□□□ -0.07
HDAC4-202ENST00000430200 MRIQ9BWK5 157 aa14.64□□□□□ -0.07
HDAC4-202ENST00000430200 MYH1P12882 1939 aa14.63□□□□□ -0.07
HDAC4-202ENST00000430200 SPDYE5A6NIY4 337 aa14.63□□□□□ -0.07
HDAC4-202ENST00000430200 UNCXA6NJT0 531 aa14.63□□□□□ -0.07
HDAC4-202ENST00000430200 ZBTB22O15209 634 aa14.63□□□□□ -0.07
HDAC4-202ENST00000430200 LDHBP07195 334 aaKnown RBP14.63□□□□□ -0.07
HDAC4-202ENST00000430200 MIGA2Q7L4E1 593 aa14.63□□□□□ -0.07
HDAC4-202ENST00000430200 SH3BP5LQ7L8J4 393 aa14.63□□□□□ -0.07
HDAC4-202ENST00000430200 FAM43AQ8N2R8 423 aa14.63□□□□□ -0.07
HDAC4-202ENST00000430200 DDX4Q9NQI0 724 aaKnown RBP14.63□□□□□ -0.07
HDAC4-202ENST00000430200 PDS5AQ29RF7 1337 aaKnown RBP14.63□□□□□ -0.07
HDAC4-202ENST00000430200 ZBED9Q6R2W3 1325 aa14.63□□□□□ -0.07
HDAC4-202ENST00000430200 SEMA3EO15041 775 aa14.62□□□□□ -0.07
HDAC4-202ENST00000430200 FKTNO75072 461 aa14.62□□□□□ -0.07
HDAC4-202ENST00000430200 GNAI2P04899 355 aa14.62□□□□□ -0.07
HDAC4-202ENST00000430200 MAP3K9P80192 1104 aa14.62□□□□□ -0.07
HDAC4-202ENST00000430200 POLA2Q14181 598 aa14.62□□□□□ -0.07
HDAC4-202ENST00000430200 ZKSCAN2Q63HK3 967 aa14.62□□□□□ -0.07
HDAC4-202ENST00000430200 NAV1Q8NEY1 1877 aa14.62□□□□□ -0.07
HDAC4-202ENST00000430200 HMG20BQ9P0W2 317 aa14.62□□□□□ -0.07
HDAC4-202ENST00000430200 DENND2AQ9ULE3 1009 aa14.62□□□□□ -0.07
HDAC4-202ENST00000430200 CCL15-CCL14A0A0B4J2E2 113 aa14.61□□□□□ -0.07
HDAC4-202ENST00000430200 CCL15Q16663 113 aa14.61□□□□□ -0.07
HDAC4-202ENST00000430200 CD99L2Q8TCZ2 262 aa14.61□□□□□ -0.07
HDAC4-202ENST00000430200 FAM151AQ8WW52 585 aa14.61□□□□□ -0.07
HDAC4-202ENST00000430200 TMOD2Q9NZR1 351 aa14.61□□□□□ -0.07
HDAC4-202ENST00000430200 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-202ENST00000430200 MYH7P12883 1935 aa14.6□□□□□ -0.07
HDAC4-202ENST00000430200 KIAA0100Q14667 2235 aaKnown RBP14.6□□□□□ -0.07
HDAC4-202ENST00000430200 IRF6O14896 467 aa14.6□□□□□ -0.07
HDAC4-202ENST00000430200 IPO8O15397 1037 aaKnown RBP14.6□□□□□ -0.07
HDAC4-202ENST00000430200 WDHD1O75717 1129 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-202ENST00000430200 MCAMP43121 646 aa14.6□□□□□ -0.07
HDAC4-202ENST00000430200 RGS3P49796 1198 aa14.6□□□□□ -0.07
HDAC4-202ENST00000430200 MLLT1Q03111 559 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-202ENST00000430200 TBC1D9Q6ZT07 1266 aa14.6□□□□□ -0.07
HDAC4-202ENST00000430200 OTOP1Q7RTM1 612 aa14.6□□□□□ -0.07
HDAC4-202ENST00000430200 TLR7Q9NYK1 1049 aaKnown RBP14.6□□□□□ -0.07
HDAC4-202ENST00000430200 ABCF2Q9UG63 623 aa14.6□□□□□ -0.07
HDAC4-202ENST00000430200 CSADQ9Y600 493 aa14.6□□□□□ -0.07
HDAC4-202ENST00000430200 MROH7-TTC4A0A0A0MT08 1334 aa14.6□□□□□ -0.07
HDAC4-202ENST00000430200 ALDH1A1P00352 501 aa14.59□□□□□ -0.07
HDAC4-202ENST00000430200 ARID4AP29374 1257 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-202ENST00000430200 INHBEP58166 350 aa14.59□□□□□ -0.07
HDAC4-202ENST00000430200 RHBDL3P58872 404 aa14.59□□□□□ -0.07
HDAC4-202ENST00000430200 MECOMQ03112 1051 aa14.59□□□□□ -0.07
HDAC4-202ENST00000430200 MOGSQ13724 837 aa14.59□□□□□ -0.07
HDAC4-202ENST00000430200 FBXO46Q6PJ61 603 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-202ENST00000430200 SSH3Q8TE77 659 aa14.59□□□□□ -0.07
HDAC4-202ENST00000430200 USP40Q9NVE5 1235 aa14.59□□□□□ -0.07
HDAC4-202ENST00000430200 GNL3LQ9NVN8 582 aaKnown RBP14.59□□□□□ -0.07
HDAC4-202ENST00000430200 ZNF112Q9UJU3 913 aa14.59□□□□□ -0.07
HDAC4-202ENST00000430200 DDTLA6NHG4 134 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-202ENST00000430200 BTBD19C9JJ37 291 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 BTDP43251 543 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 MVPQ14764 893 aaKnown RBP14.58□□□□□ -0.08
HDAC4-202ENST00000430200 ERO1BQ86YB8 467 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 DZIP1Q86YF9 867 aaKnown RBP14.58□□□□□ -0.08
HDAC4-202ENST00000430200 PANK1Q8TE04 598 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 NEUROD6Q96NK8 337 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 DBNDD2Q9BQY9 259 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 ZNF341Q9BYN7 854 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 TRIM17Q9Y577 477 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 ADGRA2Q96PE1 1338 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 DOCK3Q8IZD9 2030 aa14.58□□□□□ -0.08
HDAC4-202ENST00000430200 FAM196BA6NMK8 535 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms