RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 HIBADHP31937 336 aaKnown RBP13.54□□□□□ -0.24
APOBEC3C-202ENST00000428892 MAP3K9P80192 1104 aa13.54□□□□□ -0.24
APOBEC3C-202ENST00000428892 AOX1Q06278 1338 aa13.54□□□□□ -0.24
APOBEC3C-202ENST00000428892 CRKP46108 304 aa13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 GYG1P46976 350 aa13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 ZKSCAN2Q63HK3 967 aa13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 DZIP1LQ8IYY4 767 aaKnown RBP13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 BRI3BPQ8WY22 251 aa13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 FRAT1Q92837 279 aaPredicted RBP13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 HOOK2Q96ED9 719 aa13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 MEIS3Q99687 375 aa13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 TMEM39BQ9GZU3 492 aa13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 FAM205AQ6ZU69 1335 aa13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 MGAMO43451 1857 aa13.53□□□□□ -0.24
APOBEC3C-202ENST00000428892 CETPP11597 493 aa13.52□□□□□ -0.25
APOBEC3C-202ENST00000428892 RFX5P48382 616 aaPredicted RBP13.52□□□□□ -0.25
APOBEC3C-202ENST00000428892 FXR1P51114 621 aaKnown RBP eCLIP13.52□□□□□ -0.25
APOBEC3C-202ENST00000428892 CHAF1AQ13111 956 aaPredicted RBP13.52□□□□□ -0.25
APOBEC3C-202ENST00000428892 UBE4AQ14139 1066 aa13.52□□□□□ -0.25
APOBEC3C-202ENST00000428892 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.52□□□□□ -0.25
APOBEC3C-202ENST00000428892 MS4A4AQ96JQ5 239 aa13.52□□□□□ -0.25
APOBEC3C-202ENST00000428892 COLQQ9Y215 455 aaPredicted RBP13.52□□□□□ -0.25
APOBEC3C-202ENST00000428892 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
APOBEC3C-202ENST00000428892 CAVIN4Q5BKX8 364 aa13.51□□□□□ -0.25
APOBEC3C-202ENST00000428892 CDAN1Q8IWY9 1227 aa13.51□□□□□ -0.25
APOBEC3C-202ENST00000428892 FAM43AQ8N2R8 423 aa13.51□□□□□ -0.25
APOBEC3C-202ENST00000428892 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.51□□□□□ -0.251e-7■■□□□ 12.2
APOBEC3C-202ENST00000428892 TDRD7Q8NHU6 1098 aaKnown RBP13.51□□□□□ -0.25
APOBEC3C-202ENST00000428892 SH3TC2Q8TF17 1288 aa13.51□□□□□ -0.25
APOBEC3C-202ENST00000428892 TEKT1Q969V4 418 aa13.51□□□□□ -0.25
APOBEC3C-202ENST00000428892 WRNIP1Q96S55 665 aa13.51□□□□□ -0.25
APOBEC3C-202ENST00000428892 MAST3O60307 1309 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 SPDYE5A6NIY4 337 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 TLR2O60603 784 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 GNRH1P01148 92 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 SNAPC2Q13487 334 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 DCAF15Q66K64 600 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 TMEM57Q8N5G2 664 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 CLUAP1Q96AJ1 413 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 TEPSINQ96N21 525 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 PUS3Q9BZE2 481 aaKnown RBP13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 IQSEC3Q9UPP2 1182 aaPredicted RBP13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 LRRFIP2Q9Y608 721 aaKnown RBP13.5□□□□□ -0.25
APOBEC3C-202ENST00000428892 MROH5Q6ZUA9 1318 aa13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 DOCK2Q92608 1830 aa13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 RLBP1P12271 317 aa13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 CACNB3P54284 484 aa13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 PRMT2P55345 433 aa13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 LACTBP83111 547 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 CAP1Q01518 475 aa13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 ERO1BQ86YB8 467 aa13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 DPF3Q92784 378 aa13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 FAM84BQ96KN1 310 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 ZCCHC17Q9NP64 241 aaKnown RBP13.49□□□□□ -0.25
APOBEC3C-202ENST00000428892 GNAI3P08754 354 aa13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 PRKCSHP14314 528 aaPredicted RBP13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 MTX1Q13505 466 aa13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 RAET1EQ8TD07 263 aa13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 ZKSCAN4Q969J2 545 aaPredicted RBP13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 SNCAIPQ9Y6H5 919 aa13.48□□□□□ -0.25
APOBEC3C-202ENST00000428892 BTBD19C9JJ37 291 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 H0YGN5 161 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 IRF6O14896 467 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 HOXD10P28358 340 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 PPIL2Q13356 520 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 LRRC24Q50LG9 513 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 BIN2Q9UBW5 565 aaPredicted RBP13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 RCAN3Q9UKA8 241 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 HDAC5Q9UQL6 1122 aa13.47□□□□□ -0.25
APOBEC3C-202ENST00000428892 FMNL1O95466 1100 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3C-202ENST00000428892 HDLBPQ00341 1268 aaKnown RBP13.46□□□□□ -0.25
APOBEC3C-202ENST00000428892 GSE1Q14687 1217 aa13.46□□□□□ -0.25
APOBEC3C-202ENST00000428892 HS6ST3Q8IZP7 471 aa13.46□□□□□ -0.25
APOBEC3C-202ENST00000428892 HTATIP2Q9BUP3 242 aa13.46□□□□□ -0.25
APOBEC3C-202ENST00000428892 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.25
APOBEC3C-202ENST00000428892 TSHZ2Q9NRE2 1034 aa13.46□□□□□ -0.25
APOBEC3C-202ENST00000428892 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 EYA2O00167 538 aa13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 PSMC4P43686 418 aa13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 UBXN2AP68543 259 aa13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 PPATQ06203 517 aa13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 ATG9AQ7Z3C6 839 aa13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 FAM83AQ86UY5 434 aa13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 CPA4Q9UI42 421 aa13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 CEP290O15078 2479 aa13.45□□□□□ -0.26
APOBEC3C-202ENST00000428892 MYPNQ86TC9 1320 aa13.44□□□□□ -0.26
APOBEC3C-202ENST00000428892 PDE8BO95263 885 aa13.44□□□□□ -0.26
APOBEC3C-202ENST00000428892 GNAI2P04899 355 aa13.44□□□□□ -0.26
APOBEC3C-202ENST00000428892 GRK4P32298 578 aa13.44□□□□□ -0.26
APOBEC3C-202ENST00000428892 FTSJ3Q8IY81 847 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms