RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 COG6Q9Y2V7 657 aa11.22□□□□□ -0.61
SMC1A-203ENST00000428014 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
SMC1A-203ENST00000428014 FAM155AB1AL88 458 aaPredicted RBP11.21□□□□□ -0.61
SMC1A-203ENST00000428014 ENTPD3O75355 529 aa11.21□□□□□ -0.61
SMC1A-203ENST00000428014 RASA3Q14644 834 aa11.21□□□□□ -0.61
SMC1A-203ENST00000428014 CLASRPQ8N2M8 674 aaKnown RBP11.21□□□□□ -0.61
SMC1A-203ENST00000428014 TEPSINQ96N21 525 aa11.21□□□□□ -0.61
SMC1A-203ENST00000428014 HMG20BQ9P0W2 317 aa11.21□□□□□ -0.61
SMC1A-203ENST00000428014 RFX7Q2KHR2 1363 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 AKAP11Q9UKA4 1901 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 GPR75-ASB3A0A0A6YYF3 556 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 ECM2O94769 699 aaPredicted RBP11.2□□□□□ -0.62
SMC1A-203ENST00000428014 PRDX5P30044 214 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 ADORA1P30542 326 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 IREB2P48200 963 aaKnown RBP11.2□□□□□ -0.62
SMC1A-203ENST00000428014 CTCFP49711 727 aaPredicted RBP11.2□□□□□ -0.62
SMC1A-203ENST00000428014 RBM5P52756 815 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMC1A-203ENST00000428014 MAP3K10Q02779 954 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 CHAF1AQ13111 956 aaPredicted RBP11.2□□□□□ -0.62
SMC1A-203ENST00000428014 OS9Q13438 667 aaPredicted RBP11.2□□□□□ -0.62
SMC1A-203ENST00000428014 GORABQ5T7V8 394 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 ERICH6Q7L0X2 663 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 TICAM2Q86XR7 235 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 SIRT2Q8IXJ6 389 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 RHPN1Q8TCX5 695 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 FAM151AQ8WW52 585 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 DAGLAQ9Y4D2 1042 aa11.2□□□□□ -0.62
SMC1A-203ENST00000428014 F8W031 263 aaPredicted RBP11.19□□□□□ -0.62
SMC1A-203ENST00000428014 HSPA1AP0DMV8 641 aaKnown RBP11.19□□□□□ -0.62
SMC1A-203ENST00000428014 HSPA1BP0DMV9 641 aaKnown RBP11.19□□□□□ -0.62
SMC1A-203ENST00000428014 PLCG2P16885 1265 aa11.19□□□□□ -0.62
SMC1A-203ENST00000428014 MCAMP43121 646 aa11.19□□□□□ -0.62
SMC1A-203ENST00000428014 RRP1P56182 461 aaKnown RBP11.19□□□□□ -0.62
SMC1A-203ENST00000428014 PPP4CP60510 307 aa11.19□□□□□ -0.62
SMC1A-203ENST00000428014 FMR1Q06787 632 aaKnown RBP eCLIP11.19□□□□□ -0.627e-7■■□□□ 13.2
SMC1A-203ENST00000428014 DCAF15Q66K64 600 aa11.19□□□□□ -0.62
SMC1A-203ENST00000428014 ANKRD13AQ8IZ07 590 aa11.19□□□□□ -0.62
SMC1A-203ENST00000428014 AIDAQ96BJ3 306 aa11.19□□□□□ -0.62
SMC1A-203ENST00000428014 EAF2Q96CJ1 260 aaPredicted RBP11.19□□□□□ -0.62
SMC1A-203ENST00000428014 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
SMC1A-203ENST00000428014 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
SMC1A-203ENST00000428014 TDRD3Q9H7E2 651 aaKnown RBP11.19□□□□□ -0.62
SMC1A-203ENST00000428014 DBNLQ9UJU6 430 aaKnown RBP11.19□□□□□ -0.62
SMC1A-203ENST00000428014 IQSEC3Q9UPP2 1182 aaPredicted RBP11.19□□□□□ -0.62
SMC1A-203ENST00000428014 ATRNL1Q5VV63 1379 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 MROH7-TTC4A0A0A0MT08 1334 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 ALDH1A1P00352 501 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 TM4SF4P48230 202 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 ZNF157P51786 506 aaPredicted RBP11.18□□□□□ -0.62
SMC1A-203ENST00000428014 TTF1Q15361 905 aaPredicted RBP11.18□□□□□ -0.62
SMC1A-203ENST00000428014 GRIK5Q16478 980 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 CYP4F22Q6NT55 531 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 DZIP1Q86YF9 867 aaKnown RBP11.18□□□□□ -0.62
SMC1A-203ENST00000428014 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 NSUN4Q96CB9 384 aaKnown RBP11.18□□□□□ -0.62
SMC1A-203ENST00000428014 DCTPP1Q9H773 170 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 ZNF408Q9H9D4 720 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 ZCCHC17Q9NP64 241 aaKnown RBP11.18□□□□□ -0.62
SMC1A-203ENST00000428014 SSC5DA1L4H1 1573 aa11.18□□□□□ -0.62
SMC1A-203ENST00000428014 MYH2Q9UKX2 1941 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 TBC1D12O60347 775 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 SREBF2Q12772 1141 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 TTC39AQ5SRH9 613 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 CDC42EP5Q6NZY7 148 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 C1orf115Q9H7X2 142 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 VEZTQ9HBM0 779 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 ZNF112Q9UJU3 913 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.17□□□□□ -0.62
SMC1A-203ENST00000428014 MAST2Q6P0Q8 1798 aa11.17□□□□□ -0.62
SMC1A-203ENST00000428014 CLRN2A0PK11 232 aa11.16□□□□□ -0.62
SMC1A-203ENST00000428014 TESPA1A2RU30 521 aaPredicted RBP11.16□□□□□ -0.62
SMC1A-203ENST00000428014 MANSC4A6NHS7 340 aaPredicted RBP11.16□□□□□ -0.62
SMC1A-203ENST00000428014 USP2O75604 605 aaPredicted RBP11.16□□□□□ -0.62
SMC1A-203ENST00000428014 BAG3O95817 575 aa11.16□□□□□ -0.62
SMC1A-203ENST00000428014 MECOMQ03112 1051 aa11.16□□□□□ -0.62
SMC1A-203ENST00000428014 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMC1A-203ENST00000428014 GINM1Q9NU53 330 aa11.16□□□□□ -0.62
SMC1A-203ENST00000428014 JAG2Q9Y219 1238 aa11.16□□□□□ -0.62
SMC1A-203ENST00000428014 EXOC6BQ9Y2D4 811 aa11.16□□□□□ -0.62
SMC1A-203ENST00000428014 ATP5JP18859 108 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 RHBDL3P58872 404 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 NOL9Q5SY16 702 aaKnown RBP11.15□□□□□ -0.62
SMC1A-203ENST00000428014 NBPF12Q5TAG4 269 aaPredicted RBP11.15□□□□□ -0.62
SMC1A-203ENST00000428014 C20orf194Q5TEA3 1177 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 SPRYD7Q5W111 196 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 METTL16Q86W50 562 aaKnown RBP11.15□□□□□ -0.62
SMC1A-203ENST00000428014 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 LRRCC1Q9C099 1032 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 DHX36Q9H2U1 1008 aaKnown RBP11.15□□□□□ -0.62
SMC1A-203ENST00000428014 LRP2BPQ9P2M1 347 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 ABCF2Q9UG63 623 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 ANGEL1Q9UNK9 670 aaKnown RBP11.15□□□□□ -0.62
SMC1A-203ENST00000428014 PCDHAC2Q9Y5I4 1007 aa11.15□□□□□ -0.62
SMC1A-203ENST00000428014 DOCK2Q92608 1830 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 FOXN1O15353 648 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 WDHD1O75717 1129 aaPredicted RBP11.14□□□□□ -0.63
SMC1A-203ENST00000428014 CYP2E1P05181 493 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms