RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 MYO5AQ9Y4I1 1855 aaKnown RBP22.74■■□□□ 1.23
PSPC1-202ENST00000427943 VGLL4Q14135 290 aa22.73■■□□□ 1.23
PSPC1-202ENST00000427943 IFNL1Q8IU54 200 aa22.73■■□□□ 1.23
PSPC1-202ENST00000427943 ZGPATQ8N5A5 531 aaKnown RBP22.73■■□□□ 1.23
PSPC1-202ENST00000427943 ZNF296Q8WUU4 475 aaPredicted RBP22.73■■□□□ 1.23
PSPC1-202ENST00000427943 CNKSR2Q8WXI2 1034 aa22.73■■□□□ 1.23
PSPC1-202ENST00000427943 R3HDMLQ9H3Y0 253 aa22.73■■□□□ 1.23
PSPC1-202ENST00000427943 PDS5AQ29RF7 1337 aaKnown RBP22.73■■□□□ 1.23
PSPC1-202ENST00000427943 MAST2Q6P0Q8 1798 aa22.73■■□□□ 1.23
PSPC1-202ENST00000427943 IGF2BP3O00425 579 aaKnown RBP eCLIP22.72■■□□□ 1.23
PSPC1-202ENST00000427943 ZBTB22O15209 634 aa22.72■■□□□ 1.23
PSPC1-202ENST00000427943 MAP3K9P80192 1104 aa22.72■■□□□ 1.23
PSPC1-202ENST00000427943 TCP10Q12799 353 aa22.72■■□□□ 1.23
PSPC1-202ENST00000427943 NFIAQ12857 509 aa22.72■■□□□ 1.23
PSPC1-202ENST00000427943 GORABQ5T7V8 394 aa22.72■■□□□ 1.23
PSPC1-202ENST00000427943 DZIP1Q86YF9 867 aaKnown RBP22.72■■□□□ 1.23
PSPC1-202ENST00000427943 GPR25O00155 361 aa22.71■■□□□ 1.23
PSPC1-202ENST00000427943 ZBTB7BO15156 539 aaPredicted RBP22.71■■□□□ 1.23
PSPC1-202ENST00000427943 ATP8B2P98198 1209 aa22.71■■□□□ 1.23
PSPC1-202ENST00000427943 OS9Q13438 667 aaPredicted RBP22.71■■□□□ 1.23
PSPC1-202ENST00000427943 PI16Q6UXB8 463 aa22.71■■□□□ 1.23
PSPC1-202ENST00000427943 CTU1Q7Z7A3 348 aaKnown RBP22.71■■□□□ 1.23
PSPC1-202ENST00000427943 PANK1Q8TE04 598 aa22.71■■□□□ 1.23
PSPC1-202ENST00000427943 SSH3Q8TE77 659 aa22.71■■□□□ 1.23
PSPC1-202ENST00000427943 WRNIP1Q96S55 665 aa22.71■■□□□ 1.23
PSPC1-202ENST00000427943 USP40Q9NVE5 1235 aa22.71■■□□□ 1.23
PSPC1-202ENST00000427943 CSADQ9Y600 493 aa22.71■■□□□ 1.23
PSPC1-202ENST00000427943 INHBEP58166 350 aa22.7■■□□□ 1.22
PSPC1-202ENST00000427943 FAM151AQ8WW52 585 aa22.7■■□□□ 1.22
PSPC1-202ENST00000427943 CFHR5Q9BXR6 569 aa22.7■■□□□ 1.22
PSPC1-202ENST00000427943 HMG20BQ9P0W2 317 aa22.7■■□□□ 1.22
PSPC1-202ENST00000427943 GAKO14976 1311 aa22.69■■□□□ 1.22
PSPC1-202ENST00000427943 ALDH1A1P00352 501 aa22.69■■□□□ 1.22
PSPC1-202ENST00000427943 HOOK2Q96ED9 719 aa22.69■■□□□ 1.22
PSPC1-202ENST00000427943 OTUD5Q96G74 571 aa22.69■■□□□ 1.22
PSPC1-202ENST00000427943 FAM198AQ9UFP1 575 aa22.69■■□□□ 1.22
PSPC1-202ENST00000427943 SNCAIPQ9Y6H5 919 aa22.69■■□□□ 1.22
PSPC1-202ENST00000427943 SURF6O75683 361 aaKnown RBP22.68■■□□□ 1.22
PSPC1-202ENST00000427943 ARID4AP29374 1257 aaPredicted RBP22.68■■□□□ 1.22
PSPC1-202ENST00000427943 DCAF15Q66K64 600 aa22.68■■□□□ 1.22
PSPC1-202ENST00000427943 SPTY2D1Q68D10 685 aaPredicted RBP22.68■■□□□ 1.22
PSPC1-202ENST00000427943 MIGA2Q7L4E1 593 aa22.68■■□□□ 1.22
PSPC1-202ENST00000427943 SPATA5Q8NB90 893 aa22.68■■□□□ 1.22
PSPC1-202ENST00000427943 ZKSCAN4Q969J2 545 aaPredicted RBP22.68■■□□□ 1.22
PSPC1-202ENST00000427943 RFX7Q2KHR2 1363 aa22.67■■□□□ 1.22
PSPC1-202ENST00000427943 TNNI3KQ59H18 835 aa22.67■■□□□ 1.22
PSPC1-202ENST00000427943 ERICH6Q7L0X2 663 aa22.67■■□□□ 1.22
PSPC1-202ENST00000427943 PTPN18Q99952 460 aa22.67■■□□□ 1.22
PSPC1-202ENST00000427943 ZNF341Q9BYN7 854 aa22.67■■□□□ 1.22
PSPC1-202ENST00000427943 FPGT-TNNI3KV9GXZ4 949 aa22.67■■□□□ 1.22
PSPC1-202ENST00000427943 CDK5RAP2Q96SN8 1893 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 MROH7-TTC4A0A0A0MT08 1334 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 FKTNO75072 461 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 MCAMP43121 646 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 BTDP43251 543 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 MECOMQ03112 1051 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 NOM1Q5C9Z4 860 aaKnown RBP22.66■■□□□ 1.22
PSPC1-202ENST00000427943 TBC1D9Q6ZT07 1266 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 ZFPM1Q8IX07 1006 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 MS4A4AQ96JQ5 239 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 DBNDD2Q9BQY9 259 aa22.66■■□□□ 1.22
PSPC1-202ENST00000427943 SPDYE5A6NIY4 337 aa22.65■■□□□ 1.22
PSPC1-202ENST00000427943 INPP5BP32019 993 aa22.65■■□□□ 1.22
PSPC1-202ENST00000427943 RGS3P49796 1198 aa22.65■■□□□ 1.22
PSPC1-202ENST00000427943 CEP85Q6P2H3 762 aa22.65■■□□□ 1.22
PSPC1-202ENST00000427943 SLF2Q8IX21 1173 aa22.65■■□□□ 1.22
PSPC1-202ENST00000427943 ZNF384Q8TF68 577 aa22.65■■□□□ 1.22
PSPC1-202ENST00000427943 GPR108Q9NPR9 543 aa22.65■■□□□ 1.22
PSPC1-202ENST00000427943 DOCK1Q14185 1865 aa22.64■■□□□ 1.22
PSPC1-202ENST00000427943 CCL15-CCL14A0A0B4J2E2 113 aa22.64■■□□□ 1.21
PSPC1-202ENST00000427943 TESPA1A2RU30 521 aaPredicted RBP22.64■■□□□ 1.21
PSPC1-202ENST00000427943 CRHR2Q13324 411 aa22.64■■□□□ 1.21
PSPC1-202ENST00000427943 CCL15Q16663 113 aa22.64■■□□□ 1.21
PSPC1-202ENST00000427943 OTUD7BQ6GQQ9 843 aa22.64■■□□□ 1.21
PSPC1-202ENST00000427943 BRI3BPQ8WY22 251 aa22.64■■□□□ 1.21
PSPC1-202ENST00000427943 UQCRFS1P1P0C7P4 283 aa22.63■■□□□ 1.21
PSPC1-202ENST00000427943 TTC39AQ5SRH9 613 aa22.63■■□□□ 1.21
PSPC1-202ENST00000427943 ERO1BQ86YB8 467 aa22.63■■□□□ 1.21
PSPC1-202ENST00000427943 FAM163AQ96GL9 167 aaPredicted RBP22.63■■□□□ 1.21
PSPC1-202ENST00000427943 IDI2Q9BXS1 227 aa22.63■■□□□ 1.21
PSPC1-202ENST00000427943 SNRKQ9NRH2 765 aa22.63■■□□□ 1.21
PSPC1-202ENST00000427943 RAI14Q9P0K7 980 aa22.63■■□□□ 1.21
PSPC1-202ENST00000427943 NOP58Q9Y2X3 529 aaKnown RBP22.63■■□□□ 1.21
PSPC1-202ENST00000427943 FOCADQ5VW36 1801 aa22.63■■□□□ 1.21
PSPC1-202ENST00000427943 GTF2A2P52657 109 aa22.62■■□□□ 1.21
PSPC1-202ENST00000427943 PICALMQ13492 652 aa22.62■■□□□ 1.21
PSPC1-202ENST00000427943 NSUN4Q96CB9 384 aaKnown RBP22.62■■□□□ 1.21
PSPC1-202ENST00000427943 DDX4Q9NQI0 724 aaKnown RBP22.62■■□□□ 1.21
PSPC1-202ENST00000427943 TLR7Q9NYK1 1049 aaKnown RBP22.62■■□□□ 1.21
PSPC1-202ENST00000427943 ATRNL1Q5VV63 1379 aa22.62■■□□□ 1.21
PSPC1-202ENST00000427943 ATAD5Q96QE3 1844 aa22.61■■□□□ 1.21
PSPC1-202ENST00000427943 ENTPD3O75355 529 aa22.61■■□□□ 1.21
PSPC1-202ENST00000427943 WDHD1O75717 1129 aaPredicted RBP22.61■■□□□ 1.21
PSPC1-202ENST00000427943 ZSCAN29Q8IWY8 852 aaPredicted RBP22.61■■□□□ 1.21
PSPC1-202ENST00000427943 ZSWIM8A7E2V4 1837 aa22.61■■□□□ 1.21
PSPC1-202ENST00000427943 PTPRFP10586 1907 aa22.61■■□□□ 1.21
PSPC1-202ENST00000427943 PHIPQ8WWQ0 1821 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 GPR75-ASB3A0A0A6YYF3 556 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 IRF6O14896 467 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 MS4A1P11836 297 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms