RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 SSH1Q8WYL5 1049 aa11.11□□□□□ -0.63
COPS6-204ENST00000426712 ZKSCAN4Q969J2 545 aaPredicted RBP11.11□□□□□ -0.63
COPS6-204ENST00000426712 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
COPS6-204ENST00000426712 PHIPQ8WWQ0 1821 aa11.11□□□□□ -0.63
COPS6-204ENST00000426712 E9PSI1 815 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 EYA2O00167 538 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 GNRH1P01148 92 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 LACTBP83111 547 aaPredicted RBP11.1□□□□□ -0.63
COPS6-204ENST00000426712 PPATQ06203 517 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 SLFN5Q08AF3 891 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 SNAPC2Q13487 334 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 HABP4Q5JVS0 413 aaKnown RBP11.1□□□□□ -0.63
COPS6-204ENST00000426712 DCAF15Q66K64 600 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 TRMT2AQ8IZ69 625 aaKnown RBP11.1□□□□□ -0.63
COPS6-204ENST00000426712 FAM151AQ8WW52 585 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 LPIN2Q92539 896 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 WRNIP1Q96S55 665 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 TMOD2Q9NZR1 351 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 PTCH2Q9Y6C5 1203 aa11.1□□□□□ -0.63
COPS6-204ENST00000426712 CEP290O15078 2479 aa11.09□□□□□ -0.63
COPS6-204ENST00000426712 PRMT2P55345 433 aa11.09□□□□□ -0.63
COPS6-204ENST00000426712 ALDH1L2Q3SY69 923 aa11.09□□□□□ -0.63
COPS6-204ENST00000426712 SLC9C1Q4G0N8 1177 aa11.09□□□□□ -0.63
COPS6-204ENST00000426712 CDC42EP5Q6NZY7 148 aa11.09□□□□□ -0.63
COPS6-204ENST00000426712 ZNF341Q9BYN7 854 aa11.09□□□□□ -0.63
COPS6-204ENST00000426712 KCNH4Q9UQ05 1017 aa11.09□□□□□ -0.63
COPS6-204ENST00000426712 DOCK2Q92608 1830 aa11.09□□□□□ -0.63
COPS6-204ENST00000426712 WDHD1O75717 1129 aaPredicted RBP11.08□□□□□ -0.64
COPS6-204ENST00000426712 CIAO1O76071 339 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 SLC5A1P13866 664 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 INPP5BP32019 993 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 MAP3K10Q02779 954 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 MOGSQ13724 837 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 MIGA2Q7L4E1 593 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 ARHGAP39Q9C0H5 1083 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 DAGLAQ9Y4D2 1042 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 ADGRA2Q96PE1 1338 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 SALL1Q9NSC2 1324 aa11.08□□□□□ -0.64
COPS6-204ENST00000426712 CTGFP29279 349 aa11.07□□□□□ -0.64
COPS6-204ENST00000426712 KIF22Q14807 665 aa11.07□□□□□ -0.64
COPS6-204ENST00000426712 NOL9Q5SY16 702 aaKnown RBP11.07□□□□□ -0.64
COPS6-204ENST00000426712 FAM198AQ9UFP1 575 aa11.07□□□□□ -0.64
COPS6-204ENST00000426712 PHF20L1A8MW92 1017 aa11.06□□□□□ -0.64
COPS6-204ENST00000426712 CXCL11O14625 94 aa11.06□□□□□ -0.64
COPS6-204ENST00000426712 SEMA3EO15041 775 aa11.06□□□□□ -0.64
COPS6-204ENST00000426712 ZFPM1Q8IX07 1006 aa11.06□□□□□ -0.64
COPS6-204ENST00000426712 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.06□□□□□ -0.64
COPS6-204ENST00000426712 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
COPS6-204ENST00000426712 CEP126Q9P2H0 1117 aa11.06□□□□□ -0.64
COPS6-204ENST00000426712 PDHXO00330 501 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 LDHBP07195 334 aaKnown RBP11.05□□□□□ -0.64
COPS6-204ENST00000426712 PRDX5P30044 214 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 PSMC4P43686 418 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 TCP10Q12799 353 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 NFIAQ12857 509 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 DOCK1Q14185 1865 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 DIXDC1Q155Q3 683 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 ATP2B3Q16720 1220 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 SLC4A8Q2Y0W8 1093 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 GPAT2Q6NUI2 795 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 SH3TC2Q8TF17 1288 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 TRIM47Q96LD4 638 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 IDI2Q9BXS1 227 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 USP40Q9NVE5 1235 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 GNL3LQ9NVN8 582 aaKnown RBP11.05□□□□□ -0.64
COPS6-204ENST00000426712 SRRDQ9UH36 339 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 DENND2AQ9ULE3 1009 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 ATAD5Q96QE3 1844 aa11.05□□□□□ -0.64
COPS6-204ENST00000426712 ATRNL1Q5VV63 1379 aa11.04□□□□□ -0.64
COPS6-204ENST00000426712 CT47B1P0C2W7 299 aaPredicted RBP11.04□□□□□ -0.64
COPS6-204ENST00000426712 UBTFL1P0CB47 393 aaPredicted RBP11.04□□□□□ -0.64
COPS6-204ENST00000426712 HOXD10P28358 340 aa11.04□□□□□ -0.64
COPS6-204ENST00000426712 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
COPS6-204ENST00000426712 PHKA1P46020 1223 aa11.04□□□□□ -0.64
COPS6-204ENST00000426712 CDCA7LQ96GN5 454 aa11.04□□□□□ -0.64
COPS6-204ENST00000426712 COPRSQ9NQ92 184 aa11.04□□□□□ -0.64
COPS6-204ENST00000426712 CPA4Q9UI42 421 aa11.04□□□□□ -0.64
COPS6-204ENST00000426712 HDAC5Q9UQL6 1122 aa11.04□□□□□ -0.64
COPS6-204ENST00000426712 GAKO14976 1311 aa11.04□□□□□ -0.64
COPS6-204ENST00000426712 ENTPD3O75355 529 aa11.03□□□□□ -0.64
COPS6-204ENST00000426712 BCRP11274 1271 aa11.03□□□□□ -0.64
COPS6-204ENST00000426712 OSBPP22059 807 aa11.03□□□□□ -0.64
COPS6-204ENST00000426712 FXR1P51114 621 aaKnown RBP eCLIP11.03□□□□□ -0.64
COPS6-204ENST00000426712 CCDC102BQ68D86 513 aa11.03□□□□□ -0.64
COPS6-204ENST00000426712 SH3BP5LQ7L8J4 393 aa11.03□□□□□ -0.64
COPS6-204ENST00000426712 UBE2Q1Q7Z7E8 422 aa11.03□□□□□ -0.64
COPS6-204ENST00000426712 ZGPATQ8N5A5 531 aaKnown RBP11.03□□□□□ -0.64
COPS6-204ENST00000426712 SIL1Q9H173 461 aa11.03□□□□□ -0.64
COPS6-204ENST00000426712 NOB1Q9ULX3 412 aaKnown RBP11.03□□□□□ -0.64
COPS6-204ENST00000426712 AFG3L2Q9Y4W6 797 aa11.03□□□□□ -0.64
COPS6-204ENST00000426712 CDK5RAP2Q96SN8 1893 aa11.03□□□□□ -0.64
COPS6-204ENST00000426712 MYO5AQ9Y4I1 1855 aaKnown RBP11.03□□□□□ -0.64
COPS6-204ENST00000426712 PDS5AQ29RF7 1337 aaKnown RBP11.03□□□□□ -0.64
COPS6-204ENST00000426712 A0A0G2JLL6 359 aaPredicted RBP11.02□□□□□ -0.65
COPS6-204ENST00000426712 NPM3O75607 178 aaKnown RBP11.02□□□□□ -0.65
COPS6-204ENST00000426712 PTPRAP18433 802 aa11.02□□□□□ -0.65
COPS6-204ENST00000426712 GRK4P32298 578 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1456.6 ms