RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 NAP1L2Q9ULW6 460 aaPredicted RBP20.54■□□□□ 0.88
FN1-208ENST00000426059 MINDY4BA8MYZ0 360 aa20.53■□□□□ 0.88
FN1-208ENST00000426059 PRC1O43663 620 aa20.53■□□□□ 0.88
FN1-208ENST00000426059 NUCB2P80303 420 aa20.53■□□□□ 0.88
FN1-208ENST00000426059 MFSD14BQ5SR56 506 aa20.53■□□□□ 0.88
FN1-208ENST00000426059 CHAMP1Q96JM3 812 aa20.53■□□□□ 0.88
FN1-208ENST00000426059 SMC3Q9UQE7 1217 aa20.53■□□□□ 0.88
FN1-208ENST00000426059 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.53■□□□□ 0.88
FN1-208ENST00000426059 EVX2Q03828 476 aa20.53■□□□□ 0.88
FN1-208ENST00000426059 CYB5R4Q7L1T6 521 aa20.53■□□□□ 0.88
FN1-208ENST00000426059 ATF5Q9Y2D1 282 aaPredicted RBP20.53■□□□□ 0.88
FN1-208ENST00000426059 TRDNQ13061 729 aa20.52■□□□□ 0.88
FN1-208ENST00000426059 MXD3Q9BW11 206 aa20.52■□□□□ 0.88
FN1-208ENST00000426059 MAST2Q6P0Q8 1798 aa20.52■□□□□ 0.88
FN1-208ENST00000426059 ZMYM6O95789 1325 aa20.52■□□□□ 0.88
FN1-208ENST00000426059 GJB2P29033 226 aa20.52■□□□□ 0.88
FN1-208ENST00000426059 MCM4P33991 863 aa20.52■□□□□ 0.88
FN1-208ENST00000426059 MCM5P33992 734 aa20.52■□□□□ 0.88
FN1-208ENST00000426059 MYH2Q9UKX2 1941 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 SLC4A8Q2Y0W8 1093 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 RRP12Q5JTH9 1297 aaKnown RBP20.51■□□□□ 0.87
FN1-208ENST00000426059 CCDC125Q86Z20 511 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 CNKSR1Q969H4 720 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 DBNDD1Q9H9R9 158 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 KCNQ5Q9NR82 932 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 ZBTB22O15209 634 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 CCT2P78371 535 aaKnown RBP20.51■□□□□ 0.87
FN1-208ENST00000426059 AGXT2Q9BYV1 514 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 COA1Q9GZY4 146 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 TOMM22Q9NS69 142 aa20.51■□□□□ 0.87
FN1-208ENST00000426059 C21orf2O43822 256 aa20.5■□□□□ 0.87
FN1-208ENST00000426059 PPFIA3O75145 1194 aa20.5■□□□□ 0.87
FN1-208ENST00000426059 PPARAQ07869 468 aa20.5■□□□□ 0.87
FN1-208ENST00000426059 RAB11FIP4Q86YS3 637 aa20.5■□□□□ 0.87
FN1-208ENST00000426059 F8W031 263 aaPredicted RBP20.5■□□□□ 0.87
FN1-208ENST00000426059 G3V3G9 751 aa20.5■□□□□ 0.87
FN1-208ENST00000426059 SCRN1Q12765 414 aa20.5■□□□□ 0.87
FN1-208ENST00000426059 AKNAD1Q5T1N1 836 aa20.5■□□□□ 0.87
FN1-208ENST00000426059 DCAF8Q5TAQ9 597 aa20.5■□□□□ 0.87
FN1-208ENST00000426059 SLC16A10Q8TF71 515 aa20.5■□□□□ 0.87
FN1-208ENST00000426059 SH3RF3Q8TEJ3 882 aaPredicted RBP20.49■□□□□ 0.87
FN1-208ENST00000426059 C7orf43Q8WVR3 580 aa20.49■□□□□ 0.87
FN1-208ENST00000426059 GTF3C6Q969F1 213 aa20.49■□□□□ 0.87
FN1-208ENST00000426059 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
FN1-208ENST00000426059 C10orf71Q711Q0 1435 aa20.49■□□□□ 0.87
FN1-208ENST00000426059 KDM4AO75164 1064 aa20.49■□□□□ 0.87
FN1-208ENST00000426059 R3HDM1Q15032 1099 aaKnown RBP20.49■□□□□ 0.87
FN1-208ENST00000426059 FOXD4L6Q3SYB3 417 aaPredicted RBP20.49■□□□□ 0.87
FN1-208ENST00000426059 FOXD4L3Q6VB84 417 aaPredicted RBP20.49■□□□□ 0.87
FN1-208ENST00000426059 MFSD6Q6ZSS7 791 aa20.49■□□□□ 0.87
FN1-208ENST00000426059 CRNKL1Q9BZJ0 848 aaKnown RBP20.49■□□□□ 0.87
FN1-208ENST00000426059 UTRNP46939 3433 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 USP17L12C9JPN9 530 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 USP17L21D6R901 530 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 JAK2O60674 1132 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 DPEP1P16444 411 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 CTR9Q6PD62 1173 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 SENP2Q9HC62 589 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 DCP1AQ9NPI6 582 aaPredicted RBP20.48■□□□□ 0.87
FN1-208ENST00000426059 ZSWIM5Q9P217 1185 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 BRPF3Q9ULD4 1205 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 BRD1O95696 1058 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 SYT1P21579 422 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 CERS5Q8N5B7 392 aa20.48■□□□□ 0.87
FN1-208ENST00000426059 PDIA3P30101 505 aaKnown RBP20.47■□□□□ 0.87
FN1-208ENST00000426059 ZKSCAN3Q9BRR0 538 aa20.47■□□□□ 0.87
FN1-208ENST00000426059 FAM205AQ6ZU69 1335 aa20.47■□□□□ 0.87
FN1-208ENST00000426059 BAG4O95429 457 aaKnown RBP20.46■□□□□ 0.87
FN1-208ENST00000426059 CYP2D6P10635 497 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 KCNA3P22001 575 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 EYA3Q99504 573 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 RTFDC1Q9BY42 306 aaPredicted RBP20.46■□□□□ 0.87
FN1-208ENST00000426059 MROH7-TTC4A0A0A0MT08 1334 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 PFKFB2O60825 505 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 PRDM1O75626 825 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 GSTO1P78417 241 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 AOC3Q16853 763 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 STAG1Q8WVM7 1258 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 GBP4Q96PP9 640 aa20.46■□□□□ 0.87
FN1-208ENST00000426059 KIAA1551Q9HCM1 1747 aa20.45■□□□□ 0.87
FN1-208ENST00000426059 KLF18A0A0U1RQI7 1052 aa20.45■□□□□ 0.86
FN1-208ENST00000426059 BTDP43251 543 aa20.45■□□□□ 0.86
FN1-208ENST00000426059 TBC1D22AQ8WUA7 517 aa20.45■□□□□ 0.86
FN1-208ENST00000426059 DDX11Q96FC9 970 aa20.45■□□□□ 0.86
FN1-208ENST00000426059 TIAM2Q8IVF5 1701 aa20.45■□□□□ 0.86
FN1-208ENST00000426059 USP17L8P0C7I0 530 aa20.45■□□□□ 0.86
FN1-208ENST00000426059 TTLL6Q8N841 843 aa20.45■□□□□ 0.86
FN1-208ENST00000426059 PPP1R1BQ9UD71 204 aaPredicted RBP20.45■□□□□ 0.86
FN1-208ENST00000426059 STX6O43752 255 aa20.44■□□□□ 0.86
FN1-208ENST00000426059 USP5P45974 858 aa20.44■□□□□ 0.86
FN1-208ENST00000426059 TGFBRAP1Q8WUH2 860 aa20.44■□□□□ 0.86
FN1-208ENST00000426059 LDHCP07864 332 aa20.44■□□□□ 0.86
FN1-208ENST00000426059 FBXL16Q8N461 479 aa20.44■□□□□ 0.86
FN1-208ENST00000426059 MCM9Q9NXL9 1143 aa20.44■□□□□ 0.86
FN1-208ENST00000426059 SCN9AQ15858 1988 aa20.43■□□□□ 0.86
FN1-208ENST00000426059 PSDA5PKW4 1024 aaPredicted RBP20.43■□□□□ 0.86
FN1-208ENST00000426059 CTDNEP1O95476 244 aa20.43■□□□□ 0.86
FN1-208ENST00000426059 BAG3O95817 575 aa20.43■□□□□ 0.86
FN1-208ENST00000426059 RXRAP19793 462 aa20.43■□□□□ 0.86
FN1-208ENST00000426059 SCNN1DP51172 638 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms