RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CAVIN4Q5BKX8 364 aa21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 HHIPL2Q6UWX4 724 aa21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 WDR63Q8IWG1 891 aa21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 RAET1EQ8TD07 263 aa21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 HTATIP2Q9BUP3 242 aa21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 ZNF112Q9UJU3 913 aa21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 KCNH4Q9UQ05 1017 aa21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 ADGRA2Q96PE1 1338 aa21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 RPAP1Q9BWH6 1393 aaPredicted RBP21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 PDHXO00330 501 aa21.13■□□□□ 0.97
CHCHD3-202ENST00000423635 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.13■□□□□ 0.97
CHCHD3-202ENST00000423635 SUCLG2Q96I99 432 aa21.13■□□□□ 0.97
CHCHD3-202ENST00000423635 FRAT2O75474 233 aaPredicted RBP21.12■□□□□ 0.97
CHCHD3-202ENST00000423635 FMNL1O95466 1100 aaPredicted RBP21.12■□□□□ 0.97
CHCHD3-202ENST00000423635 INPP5BP32019 993 aa21.12■□□□□ 0.97
CHCHD3-202ENST00000423635 MOGSQ13724 837 aa21.12■□□□□ 0.97
CHCHD3-202ENST00000423635 CCDC184Q52MB2 194 aa21.12■□□□□ 0.97
CHCHD3-202ENST00000423635 MIGA2Q7L4E1 593 aa21.12■□□□□ 0.97
CHCHD3-202ENST00000423635 SRCIN1Q9C0H9 1055 aa21.12■□□□□ 0.97
CHCHD3-202ENST00000423635 PDE8BO95263 885 aa21.11■□□□□ 0.97
CHCHD3-202ENST00000423635 CCL5P13501 91 aa21.11■□□□□ 0.97
CHCHD3-202ENST00000423635 VGLL2Q8N8G2 317 aa21.11■□□□□ 0.97
CHCHD3-202ENST00000423635 RNF208Q9H0X6 261 aa21.11■□□□□ 0.97
CHCHD3-202ENST00000423635 MAST3O60307 1309 aa21.11■□□□□ 0.97
CHCHD3-202ENST00000423635 UTYO14607 1347 aa21.1■□□□□ 0.97
CHCHD3-202ENST00000423635 ECM2O94769 699 aaPredicted RBP21.1■□□□□ 0.97
CHCHD3-202ENST00000423635 UBXN2AP68543 259 aa21.1■□□□□ 0.97
CHCHD3-202ENST00000423635 RABL6Q3YEC7 729 aaPredicted RBP21.1■□□□□ 0.97
CHCHD3-202ENST00000423635 LRRC24Q50LG9 513 aa21.1■□□□□ 0.97
CHCHD3-202ENST00000423635 MYPNQ86TC9 1320 aa21.1■□□□□ 0.97
CHCHD3-202ENST00000423635 FAM151AQ8WW52 585 aa21.1■□□□□ 0.97
CHCHD3-202ENST00000423635 NR2E3Q9Y5X4 410 aa21.1■□□□□ 0.97
CHCHD3-202ENST00000423635 NBPF7P0C2Y1 421 aaPredicted RBP21.09■□□□□ 0.97
CHCHD3-202ENST00000423635 BCAMP50895 628 aa21.09■□□□□ 0.97
CHCHD3-202ENST00000423635 KIF16BQ96L93 1317 aa21.08■□□□□ 0.97
CHCHD3-202ENST00000423635 BCRP11274 1271 aa21.08■□□□□ 0.97
CHCHD3-202ENST00000423635 CAPN2P17655 700 aa21.08■□□□□ 0.97
CHCHD3-202ENST00000423635 METTL24Q5JXM2 366 aa21.08■□□□□ 0.97
CHCHD3-202ENST00000423635 NOL9Q5SY16 702 aaKnown RBP21.08■□□□□ 0.97
CHCHD3-202ENST00000423635 A0A1W2PPC1 479 aa21.07■□□□□ 0.96
CHCHD3-202ENST00000423635 ZBTB7BO15156 539 aaPredicted RBP21.07■□□□□ 0.96
CHCHD3-202ENST00000423635 SLC4A10Q6U841 1118 aa21.07■□□□□ 0.96
CHCHD3-202ENST00000423635 SLAIN1Q8ND83 568 aa21.07■□□□□ 0.96
CHCHD3-202ENST00000423635 U2AF1L4Q8WU68 220 aaKnown RBP21.07■□□□□ 0.96
CHCHD3-202ENST00000423635 BIN2Q9UBW5 565 aaPredicted RBP21.07■□□□□ 0.96
CHCHD3-202ENST00000423635 CXCL11O14625 94 aa21.06■□□□□ 0.96
CHCHD3-202ENST00000423635 SGPL1O95470 568 aa21.06■□□□□ 0.96
CHCHD3-202ENST00000423635 FCGRTP55899 365 aa21.06■□□□□ 0.96
CHCHD3-202ENST00000423635 PRKCZQ05513 592 aa21.06■□□□□ 0.96
CHCHD3-202ENST00000423635 GPAT2Q6NUI2 795 aa21.06■□□□□ 0.96
CHCHD3-202ENST00000423635 PARK7Q99497 189 aaKnown RBP21.06■□□□□ 0.96
CHCHD3-202ENST00000423635 BICC1Q9H694 974 aaKnown RBP21.06■□□□□ 0.96
CHCHD3-202ENST00000423635 FGFR2P21802 821 aa21.05■□□□□ 0.96
CHCHD3-202ENST00000423635 DLL1O00548 723 aa21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 FARP2O94887 1054 aaPredicted RBP21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 CDC42EP5Q6NZY7 148 aa21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 ANKRD44Q8N8A2 993 aa21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 SLC17A8Q8NDX2 589 aa21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 WDR66Q8TBY9 1149 aa21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 UNC93B1Q9H1C4 597 aa21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 SPINK5Q9NQ38 1064 aaPredicted RBP21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 GABRQQ9UN88 632 aa21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 IFIT1P09914 478 aaKnown RBP21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 CYP2C8P10632 490 aa21.04■□□□□ 0.96
CHCHD3-202ENST00000423635 TCP10Q12799 353 aa21.03■□□□□ 0.96
CHCHD3-202ENST00000423635 NFIAQ12857 509 aa21.03■□□□□ 0.96
CHCHD3-202ENST00000423635 PUM3Q15397 648 aaKnown RBP21.03■□□□□ 0.96
CHCHD3-202ENST00000423635 PXYLP1Q8TE99 480 aa21.03■□□□□ 0.96
CHCHD3-202ENST00000423635 DAGLAQ9Y4D2 1042 aa21.03■□□□□ 0.96
CHCHD3-202ENST00000423635 COL6A3P12111 3177 aa21.03■□□□□ 0.96
CHCHD3-202ENST00000423635 FASTKD5Q7L8L6 764 aaKnown RBP21.02■□□□□ 0.95
CHCHD3-202ENST00000423635 FAM198AQ9UFP1 575 aa21.02■□□□□ 0.95
CHCHD3-202ENST00000423635 SALL2Q9Y467 1007 aaPredicted RBP21.02■□□□□ 0.95
CHCHD3-202ENST00000423635 LAMA3Q16787 3333 aa21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 A0A0G2JLL6 359 aaPredicted RBP21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 PHF20L1A8MW92 1017 aa21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 ADCY3O60266 1144 aa21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 EVI5O60447 810 aa21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 FLT3LGP49771 235 aa21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 IRF5Q13568 498 aa21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 PRRT2Q7Z6L0 340 aaPredicted RBP21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 KLHDC4Q8TBB5 520 aa21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 SLC45A1Q9Y2W3 748 aa21.01■□□□□ 0.95
CHCHD3-202ENST00000423635 A0A0C4DFX4 3053 aa21■□□□□ 0.95
CHCHD3-202ENST00000423635 MGAMO43451 1857 aa20.99■□□□□ 0.95
CHCHD3-202ENST00000423635 SOX1O00570 391 aaPredicted RBP20.99■□□□□ 0.95
CHCHD3-202ENST00000423635 DIXDC1Q155Q3 683 aa20.99■□□□□ 0.95
CHCHD3-202ENST00000423635 LPIN2Q92539 896 aa20.99■□□□□ 0.95
CHCHD3-202ENST00000423635 CRISPLD2Q9H0B8 497 aa20.99■□□□□ 0.95
CHCHD3-202ENST00000423635 PAK6Q9NQU5 681 aaPredicted RBP20.99■□□□□ 0.95
CHCHD3-202ENST00000423635 USP40Q9NVE5 1235 aa20.99■□□□□ 0.95
CHCHD3-202ENST00000423635 AFG3L2Q9Y4W6 797 aa20.99■□□□□ 0.95
CHCHD3-202ENST00000423635 ZHX2Q9Y6X8 837 aa20.99■□□□□ 0.95
CHCHD3-202ENST00000423635 ATRNL1Q5VV63 1379 aa20.98■□□□□ 0.95
CHCHD3-202ENST00000423635 TFRCP02786 760 aaKnown RBP20.98■□□□□ 0.95
CHCHD3-202ENST00000423635 INHAP05111 366 aa20.98■□□□□ 0.95
CHCHD3-202ENST00000423635 PTPRAP18433 802 aa20.98■□□□□ 0.95
CHCHD3-202ENST00000423635 MAP3K10Q02779 954 aa20.98■□□□□ 0.95
CHCHD3-202ENST00000423635 ZFPM1Q8IX07 1006 aa20.98■□□□□ 0.95
CHCHD3-202ENST00000423635 SCYL3Q8IZE3 742 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms