RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
HERC3-204ENST00000422770 FZD1Q9UP38 647 aa11.81□□□□□ -0.52
HERC3-204ENST00000422770 NDUFB9Q9Y6M9 179 aa11.81□□□□□ -0.52
HERC3-204ENST00000422770 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 IDH1O75874 414 aaKnown RBP11.8□□□□□ -0.52
HERC3-204ENST00000422770 GSTO1P78417 241 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 TCP10Q12799 353 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 B4GALNT3Q6L9W6 998 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 TMEM39BQ9GZU3 492 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 USP40Q9NVE5 1235 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 PPP4R2Q9NY27 417 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 ANGEL1Q9UNK9 670 aaKnown RBP11.8□□□□□ -0.52
HERC3-204ENST00000422770 PCDHB15Q9Y5E8 787 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 PPP2R3BQ9Y5P8 575 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 MROH7-TTC4A0A0A0MT08 1334 aa11.8□□□□□ -0.52
HERC3-204ENST00000422770 PPP1R12BO60237 982 aaPredicted RBP11.79□□□□□ -0.52
HERC3-204ENST00000422770 AOC2O75106 756 aa11.79□□□□□ -0.52
HERC3-204ENST00000422770 LDHCP07864 332 aa11.79□□□□□ -0.52
HERC3-204ENST00000422770 BTDP43251 543 aa11.79□□□□□ -0.52
HERC3-204ENST00000422770 SUPT20HL1Q3ZLR7 823 aa11.79□□□□□ -0.52
HERC3-204ENST00000422770 NBPF12Q5TAG4 269 aaPredicted RBP11.79□□□□□ -0.52
HERC3-204ENST00000422770 NAA16Q6N069 864 aaPredicted RBP11.79□□□□□ -0.52
HERC3-204ENST00000422770 APOBEC3HQ6NTF7 200 aaKnown RBP11.79□□□□□ -0.52
HERC3-204ENST00000422770 RGMBQ6NW40 437 aa11.79□□□□□ -0.52
HERC3-204ENST00000422770 CDC42EP5Q6NZY7 148 aa11.79□□□□□ -0.52
HERC3-204ENST00000422770 ZSCAN29Q8IWY8 852 aaPredicted RBP11.79□□□□□ -0.52
HERC3-204ENST00000422770 AIDAQ96BJ3 306 aa11.79□□□□□ -0.52
HERC3-204ENST00000422770 THSD7BQ9C0I4 1608 aa11.78□□□□□ -0.52
HERC3-204ENST00000422770 CYP2E1P05181 493 aaPredicted RBP11.78□□□□□ -0.52
HERC3-204ENST00000422770 FKBP1BP68106 108 aa11.78□□□□□ -0.52
HERC3-204ENST00000422770 MKRN3Q13064 507 aaKnown RBP11.78□□□□□ -0.52
HERC3-204ENST00000422770 PICALMQ13492 652 aa11.78□□□□□ -0.52
HERC3-204ENST00000422770 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
HERC3-204ENST00000422770 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
HERC3-204ENST00000422770 MRIQ9BWK5 157 aa11.78□□□□□ -0.52
HERC3-204ENST00000422770 PIH1D3Q9NQM4 214 aaKnown RBP11.78□□□□□ -0.52
HERC3-204ENST00000422770 SSC5DA1L4H1 1573 aa11.78□□□□□ -0.52
HERC3-204ENST00000422770 PCNTO95613 3336 aa11.78□□□□□ -0.52
HERC3-204ENST00000422770 FOCADQ5VW36 1801 aa11.77□□□□□ -0.52
HERC3-204ENST00000422770 GOLIM4O00461 696 aa11.77□□□□□ -0.53
HERC3-204ENST00000422770 HSPA1AP0DMV8 641 aaKnown RBP11.77□□□□□ -0.53
HERC3-204ENST00000422770 HSPA1BP0DMV9 641 aaKnown RBP11.77□□□□□ -0.53
HERC3-204ENST00000422770 IREB2P48200 963 aaKnown RBP11.77□□□□□ -0.53
HERC3-204ENST00000422770 AAMPQ13685 434 aa11.77□□□□□ -0.53
HERC3-204ENST00000422770 CDAN1Q8IWY9 1227 aa11.77□□□□□ -0.53
HERC3-204ENST00000422770 NSUN4Q96CB9 384 aaKnown RBP11.77□□□□□ -0.53
HERC3-204ENST00000422770 ZNF512BQ96KM6 892 aaPredicted RBP11.77□□□□□ -0.53
HERC3-204ENST00000422770 DCTPP1Q9H773 170 aa11.77□□□□□ -0.53
HERC3-204ENST00000422770 MYH1P12882 1939 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 CYP7A1P22680 504 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 RGS3P49796 1198 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 MAGEB6Q8N7X4 407 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 CCDC102AQ96A19 550 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 ANTXR1Q9H6X2 564 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 AATFQ9NY61 560 aaKnown RBP eCLIP11.76□□□□□ -0.53
HERC3-204ENST00000422770 GAKO14976 1311 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 NAV1Q8NEY1 1877 aa11.76□□□□□ -0.53
HERC3-204ENST00000422770 BAG3O95817 575 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 MAP3K12Q12852 859 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 NFIAQ12857 509 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 NOGQ13253 232 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 TTF1Q15361 905 aaPredicted RBP11.75□□□□□ -0.53
HERC3-204ENST00000422770 ANKRD45Q5TZF3 282 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 MIGA2Q7L4E1 593 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 FAM83AQ86UY5 434 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 RASAL3Q86YV0 1011 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 TEX11Q8IYF3 940 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 HOOK2Q96ED9 719 aa11.75□□□□□ -0.53
HERC3-204ENST00000422770 ATAD5Q96QE3 1844 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 ZBTB22O15209 634 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 SLC10A3P09131 477 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
HERC3-204ENST00000422770 FKBP1CQ5VVH2 108 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 DCAF15Q66K64 600 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 MIGA1Q8NAN2 632 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 SH3RF3Q8TEJ3 882 aaPredicted RBP11.74□□□□□ -0.53
HERC3-204ENST00000422770 ZNF384Q8TF68 577 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 FAM151AQ8WW52 585 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 SLC10A4Q96EP9 437 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 EDC3Q96F86 508 aaKnown RBP11.74□□□□□ -0.53
HERC3-204ENST00000422770 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 TEPSINQ96N21 525 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 RWDD1Q9H446 243 aaPredicted RBP11.74□□□□□ -0.53
HERC3-204ENST00000422770 PAG1Q9NWQ8 432 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 CSADQ9Y600 493 aa11.74□□□□□ -0.53
HERC3-204ENST00000422770 GPR75-ASB3A0A0A6YYF3 556 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 USP2O75604 605 aaPredicted RBP11.73□□□□□ -0.53
HERC3-204ENST00000422770 PLCG2P16885 1265 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 MAP2K2P36507 400 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 KIF23Q02241 960 aaPredicted RBP11.73□□□□□ -0.53
HERC3-204ENST00000422770 COL13A1Q5TAT6 717 aaPredicted RBP11.73□□□□□ -0.53
HERC3-204ENST00000422770 ADGRA1Q86SQ6 560 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 WRNIP1Q96S55 665 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 CSRNP1Q96S65 589 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 ZIC5Q96T25 663 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 RPAP1Q9BWH6 1393 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms