RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 TMC6Q7Z403 805 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 CEP57L1Q8IYX8 460 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 LINC00301Q8NCQ3 95 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 LLPHQ9BRT6 129 aaKnown RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 EPB41L4AQ9HCS5 686 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 IFNKQ9P0W0 207 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 EP400Q96L91 3159 aa15.48■□□□□ 0.07
MCF2L-213ENST00000421756 RRP9O43818 475 aaKnown RBP15.48■□□□□ 0.07
MCF2L-213ENST00000421756 ITPK1Q13572 414 aa15.48■□□□□ 0.07
MCF2L-213ENST00000421756 LOC102724428A0A0B4J2F2 783 aa15.48■□□□□ 0.07
MCF2L-213ENST00000421756 SIK1P57059 783 aa15.48■□□□□ 0.07
MCF2L-213ENST00000421756 ANO1Q5XXA6 986 aa15.48■□□□□ 0.07
MCF2L-213ENST00000421756 ATP1A3P13637 1013 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 PFKFB1P16118 471 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 GRIN1Q05586 938 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 GPR101Q96P66 508 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-213ENST00000421756 STRBPQ96SI9 672 aaKnown RBP15.47■□□□□ 0.07
MCF2L-213ENST00000421756 CPDO75976 1380 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 SKILP12757 684 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 CASP1P29466 404 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 CHRNDQ07001 517 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 KLHL10Q6JEL2 608 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 LPIN2Q92539 896 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 TACC3Q9Y6A5 838 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 KLRK1P26718 216 aa15.47■□□□□ 0.07
MCF2L-213ENST00000421756 SRP68Q9UHB9 627 aaKnown RBP15.47■□□□□ 0.07
MCF2L-213ENST00000421756 ERICH2A1L162 156 aa15.46■□□□□ 0.07
MCF2L-213ENST00000421756 KIF23Q02241 960 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-213ENST00000421756 ANO10Q9NW15 660 aa15.46■□□□□ 0.07
MCF2L-213ENST00000421756 FAM205CA6NFA0 338 aa15.46■□□□□ 0.07
MCF2L-213ENST00000421756 SYKP43405 635 aa15.46■□□□□ 0.07
MCF2L-213ENST00000421756 ADGRA1Q86SQ6 560 aa15.46■□□□□ 0.07
MCF2L-213ENST00000421756 C8orf37Q96NL8 207 aa15.46■□□□□ 0.07
MCF2L-213ENST00000421756 UBAC1Q9BSL1 405 aa15.46■□□□□ 0.07
MCF2L-213ENST00000421756 NMT2O60551 498 aa15.46■□□□□ 0.06
MCF2L-213ENST00000421756 ERFEQ4G0M1 354 aa15.46■□□□□ 0.06
MCF2L-213ENST00000421756 CCDC87Q9NVE4 849 aa15.46■□□□□ 0.06
MCF2L-213ENST00000421756 TRPM3Q9HCF6 1732 aaPredicted RBP15.46■□□□□ 0.06
MCF2L-213ENST00000421756 FAM47AQ5JRC9 791 aa15.45■□□□□ 0.06
MCF2L-213ENST00000421756 TRMT44Q8IYL2 757 aaKnown RBP15.45■□□□□ 0.06
MCF2L-213ENST00000421756 ALDH8A1Q9H2A2 487 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-213ENST00000421756 VPS54Q9P1Q0 977 aa15.45■□□□□ 0.06
MCF2L-213ENST00000421756 KDM4FA0A1W2PPD8 638 aa15.45■□□□□ 0.06
MCF2L-213ENST00000421756 SERPINC1P01008 464 aa15.45■□□□□ 0.06
MCF2L-213ENST00000421756 WTAPQ15007 396 aa15.45■□□□□ 0.06
MCF2L-213ENST00000421756 GLIPR1L2Q4G1C9 344 aa15.45■□□□□ 0.06
MCF2L-213ENST00000421756 OXER1Q8TDS5 423 aa15.45■□□□□ 0.06
MCF2L-213ENST00000421756 XPO4Q9C0E2 1151 aaKnown RBP15.45■□□□□ 0.06
MCF2L-213ENST00000421756 SCN11AQ9UI33 1791 aa15.45■□□□□ 0.06
MCF2L-213ENST00000421756 MROH7-TTC4A0A0A0MT08 1334 aa15.44■□□□□ 0.06
MCF2L-213ENST00000421756 AFMP43652 599 aa15.44■□□□□ 0.06
MCF2L-213ENST00000421756 SSRP1Q08945 709 aaKnown RBP15.44■□□□□ 0.06
MCF2L-213ENST00000421756 IQCB1Q15051 598 aa15.44■□□□□ 0.06
MCF2L-213ENST00000421756 TTF1Q15361 905 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-213ENST00000421756 MARCH10Q8NA82 808 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-213ENST00000421756 CABP5Q9NP86 173 aa15.44■□□□□ 0.06
MCF2L-213ENST00000421756 SH2B2O14492 632 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-213ENST00000421756 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
MCF2L-213ENST00000421756 ADALQ6DHV7 355 aa15.44■□□□□ 0.06
MCF2L-213ENST00000421756 USP49Q70CQ1 688 aa15.44■□□□□ 0.06
MCF2L-213ENST00000421756 DIS3L2Q8IYB7 885 aaKnown RBP15.44■□□□□ 0.06
MCF2L-213ENST00000421756 FMR1NBQ8N0W7 255 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-213ENST00000421756 AATFQ9NY61 560 aaKnown RBP eCLIP15.44■□□□□ 0.06
MCF2L-213ENST00000421756 STX17P56962 302 aa15.43■□□□□ 0.06
MCF2L-213ENST00000421756 AKAP17AQ02040 695 aaKnown RBP15.43■□□□□ 0.06
MCF2L-213ENST00000421756 CCDC152Q4G0S7 254 aa15.43■□□□□ 0.06
MCF2L-213ENST00000421756 CNNM3Q8NE01 707 aa15.43■□□□□ 0.06
MCF2L-213ENST00000421756 KIAA1468Q9P260 1216 aa15.43■□□□□ 0.06
MCF2L-213ENST00000421756 GSG1L2A8MUP6 293 aa15.43■□□□□ 0.06
MCF2L-213ENST00000421756 DHX40Q8IX18 779 aaKnown RBP15.43■□□□□ 0.06
MCF2L-213ENST00000421756 CELF1Q92879 486 aaKnown RBP15.43■□□□□ 0.06
MCF2L-213ENST00000421756 NACAP1Q9BZK3 213 aa15.43■□□□□ 0.06
MCF2L-213ENST00000421756 BCL2L12Q9HB09 334 aa15.43■□□□□ 0.06
MCF2L-213ENST00000421756 TRIM28Q13263 835 aaKnown RBP15.42■□□□□ 0.06
MCF2L-213ENST00000421756 ENGASEQ8NFI3 743 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 TDRD7Q8NHU6 1098 aaKnown RBP15.42■□□□□ 0.06
MCF2L-213ENST00000421756 CDK11BP21127 795 aaKnown RBP15.42■□□□□ 0.06
MCF2L-213ENST00000421756 RTN1Q16799 776 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 NOM1Q5C9Z4 860 aaKnown RBP15.42■□□□□ 0.06
MCF2L-213ENST00000421756 INTS5Q6P9B9 1019 aaKnown RBP15.42■□□□□ 0.06
MCF2L-213ENST00000421756 RTEL1Q9NZ71 1219 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 PATL2C9JE40 543 aaKnown RBP15.42■□□□□ 0.06
MCF2L-213ENST00000421756 UQCRFS1P1P0C7P4 283 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 LONRF3Q496Y0 759 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 HOMER1Q86YM7 354 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 VGLL2Q8N8G2 317 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 KCNG4Q8TDN1 519 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 JCADQ9P266 1359 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 ADAMTSL3P82987 1691 aa15.42■□□□□ 0.06
MCF2L-213ENST00000421756 CDC25AP30304 524 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 SAFBQ15424 915 aaKnown RBP eCLIP15.41■□□□□ 0.06
MCF2L-213ENST00000421756 PPP4R3BQ5MIZ7 849 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 AKNAD1Q5T1N1 836 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 MYRIPQ8NFW9 859 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 CPLX3Q8WVH0 158 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 NGLY1Q96IV0 654 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 V9GY48 417 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-213ENST00000421756 RIC1Q4ADV7 1423 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 STRCP1A6NGW2 1772 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms