RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SNAPC2Q13487 334 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 KIF22Q14807 665 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 FKBP1CQ5VVH2 108 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 FAM83AQ86UY5 434 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 TBC1D22AQ8WUA7 517 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 ZKSCAN4Q969J2 545 aaPredicted RBP12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 TEKT1Q969V4 418 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 ZDHHC15Q96MV8 337 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 RIPOR2Q9Y4F9 1068 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 CEP290O15078 2479 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 MROH5Q6ZUA9 1318 aa12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 ADGRA2Q96PE1 1338 aa12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 ALDH1L1O75891 902 aa12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 CTGFP29279 349 aa12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 C17orf99Q6UX52 265 aa12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 VGLL2Q8N8G2 317 aa12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 SUCLG2Q96I99 432 aa12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 MRIQ9BWK5 157 aa12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 C9orf78Q9NZ63 289 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP3-202ENST00000420009 LAMA3Q16787 3333 aa12.9□□□□□ -0.35
TNFAIP3-202ENST00000420009 CHAF1AQ13111 956 aaPredicted RBP12.89□□□□□ -0.35
TNFAIP3-202ENST00000420009 MTFR1Q15390 333 aa12.89□□□□□ -0.35
TNFAIP3-202ENST00000420009 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
TNFAIP3-202ENST00000420009 UBE2Q1Q7Z7E8 422 aa12.89□□□□□ -0.35
TNFAIP3-202ENST00000420009 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
TNFAIP3-202ENST00000420009 HOOK2Q96ED9 719 aa12.89□□□□□ -0.35
TNFAIP3-202ENST00000420009 TRIM47Q96LD4 638 aa12.89□□□□□ -0.35
TNFAIP3-202ENST00000420009 SRRDQ9UH36 339 aa12.89□□□□□ -0.35
TNFAIP3-202ENST00000420009 UTYO14607 1347 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 PPATQ06203 517 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 RABL6Q3YEC7 729 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 DCAF15Q66K64 600 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 ANKRD23Q86SG2 305 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 VPS37DQ86XT2 251 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 TMOD2Q9NZR1 351 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 KCNH4Q9UQ05 1017 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 SUGT1Q9Y2Z0 365 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 MAST3O60307 1309 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
TNFAIP3-202ENST00000420009 NBPF7P0C2Y1 421 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 OSBPP22059 807 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 INPP5BP32019 993 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 PSMC4P43686 418 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 GJA8P48165 433 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 MOGSQ13724 837 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 LRRC24Q50LG9 513 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 PRO3102Q9H379 93 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 CPA4Q9UI42 421 aa12.87□□□□□ -0.35
TNFAIP3-202ENST00000420009 PDHXO00330 501 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 PDE8BO95263 885 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 GJB1P08034 283 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 GRK4P32298 578 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 METTL24Q5JXM2 366 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 HHIPL2Q6UWX4 724 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 BICC1Q9H694 974 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 ZNF112Q9UJU3 913 aa12.86□□□□□ -0.35
TNFAIP3-202ENST00000420009 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-202ENST00000420009 FGFR2P21802 821 aa12.85□□□□□ -0.35
TNFAIP3-202ENST00000420009 HOXD10P28358 340 aa12.85□□□□□ -0.35
TNFAIP3-202ENST00000420009 BCAMP50895 628 aa12.85□□□□□ -0.35
TNFAIP3-202ENST00000420009 NOL9Q5SY16 702 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-202ENST00000420009 MIGA2Q7L4E1 593 aa12.85□□□□□ -0.35
TNFAIP3-202ENST00000420009 RAET1EQ8TD07 263 aa12.85□□□□□ -0.35
TNFAIP3-202ENST00000420009 FAM151AQ8WW52 585 aa12.85□□□□□ -0.35
TNFAIP3-202ENST00000420009 MYPNQ86TC9 1320 aa12.85□□□□□ -0.35
TNFAIP3-202ENST00000420009 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-202ENST00000420009 BCRP11274 1271 aa12.84□□□□□ -0.35
TNFAIP3-202ENST00000420009 CCL5P13501 91 aa12.84□□□□□ -0.35
TNFAIP3-202ENST00000420009 DPF3Q92784 378 aa12.84□□□□□ -0.35
TNFAIP3-202ENST00000420009 HTATIP2Q9BUP3 242 aa12.84□□□□□ -0.35
TNFAIP3-202ENST00000420009 ATRNL1Q5VV63 1379 aa12.83□□□□□ -0.36
TNFAIP3-202ENST00000420009 COL6A3P12111 3177 aa12.83□□□□□ -0.36
TNFAIP3-202ENST00000420009 FMNL1O95466 1100 aaPredicted RBP12.83□□□□□ -0.36
TNFAIP3-202ENST00000420009 PRKCZQ05513 592 aa12.83□□□□□ -0.36
TNFAIP3-202ENST00000420009 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.36
TNFAIP3-202ENST00000420009 PARK7Q99497 189 aaKnown RBP12.83□□□□□ -0.36
TNFAIP3-202ENST00000420009 DAGLAQ9Y4D2 1042 aa12.83□□□□□ -0.36
TNFAIP3-202ENST00000420009 IFIT1P09914 478 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-202ENST00000420009 NFIAQ12857 509 aa12.82□□□□□ -0.36
TNFAIP3-202ENST00000420009 GPAT2Q6NUI2 795 aa12.82□□□□□ -0.36
TNFAIP3-202ENST00000420009 CDC42EP5Q6NZY7 148 aa12.82□□□□□ -0.36
TNFAIP3-202ENST00000420009 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
TNFAIP3-202ENST00000420009 KLHDC4Q8TBB5 520 aa12.82□□□□□ -0.36
TNFAIP3-202ENST00000420009 U2AF1L4Q8WU68 220 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-202ENST00000420009 RNF208Q9H0X6 261 aa12.82□□□□□ -0.36
TNFAIP3-202ENST00000420009 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-202ENST00000420009 CXCL11O14625 94 aa12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 ZBTB7BO15156 539 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 FARP2O94887 1054 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms