RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
SNRNP25-204ENST00000417493 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
SNRNP25-204ENST00000417493 YTHDC1Q96MU7 727 aaKnown RBP13.41□□□□□ -0.26
SNRNP25-204ENST00000417493 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
SNRNP25-204ENST00000417493 HMG20BQ9P0W2 317 aa13.41□□□□□ -0.26
SNRNP25-204ENST00000417493 LRP2BPQ9P2M1 347 aa13.41□□□□□ -0.26
SNRNP25-204ENST00000417493 EXOC6BQ9Y2D4 811 aa13.41□□□□□ -0.26
SNRNP25-204ENST00000417493 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
SNRNP25-204ENST00000417493 MAST2Q6P0Q8 1798 aa13.4□□□□□ -0.26
SNRNP25-204ENST00000417493 ZBTB48P10074 688 aaPredicted RBP13.4□□□□□ -0.26
SNRNP25-204ENST00000417493 PLCG2P16885 1265 aa13.4□□□□□ -0.26
SNRNP25-204ENST00000417493 LDLRAD1Q5T700 205 aa13.4□□□□□ -0.26
SNRNP25-204ENST00000417493 NBPF12Q5TAG4 269 aaPredicted RBP13.4□□□□□ -0.26
SNRNP25-204ENST00000417493 CERS3Q8IU89 383 aa13.4□□□□□ -0.26
SNRNP25-204ENST00000417493 FAM151AQ8WW52 585 aa13.4□□□□□ -0.26
SNRNP25-204ENST00000417493 USP40Q9NVE5 1235 aa13.4□□□□□ -0.26
SNRNP25-204ENST00000417493 CSADQ9Y600 493 aa13.4□□□□□ -0.26
SNRNP25-204ENST00000417493 GAKO14976 1311 aa13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 MANSC4A6NHS7 340 aaPredicted RBP13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 BAG3O95817 575 aa13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 IFIT2P09913 472 aaKnown RBP13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 AACSQ86V21 672 aa13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 RHPN1Q8TCX5 695 aa13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 DBNDD2Q9BQY9 259 aa13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 TMEM39BQ9GZU3 492 aa13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 MROH7-TTC4A0A0A0MT08 1334 aa13.39□□□□□ -0.27
SNRNP25-204ENST00000417493 LAMB1P07942 1786 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 ENTPD3O75355 529 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 HSPA8P11142 646 aaKnown RBP13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 MCAMP43121 646 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 LBX1P52954 281 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 MECOMQ03112 1051 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 TTF1Q15361 905 aaPredicted RBP13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 CDC42EP5Q6NZY7 148 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 MOB2Q70IA6 237 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 OTOFQ9HC10 1997 aa13.38□□□□□ -0.27
SNRNP25-204ENST00000417493 USP2O75604 605 aaPredicted RBP13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 WDHD1O75717 1129 aaPredicted RBP13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 BTDP43251 543 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 MAP3K9P80192 1104 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 AAMPQ13685 434 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 SPRYD7Q5W111 196 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 TNS4Q8IZW8 715 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 TEPSINQ96N21 525 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 IDI2Q9BXS1 227 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 CCDC8Q9H0W5 538 aaPredicted RBP13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 DBNLQ9UJU6 430 aaKnown RBP13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 CASP8AP2Q9UKL3 1982 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 SSC5DA1L4H1 1573 aa13.37□□□□□ -0.27
SNRNP25-204ENST00000417493 MYO5AQ9Y4I1 1855 aaKnown RBP13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 GPR75-ASB3A0A0A6YYF3 556 aa13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 TM4SF4P48230 202 aa13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 CACNB3P54284 484 aa13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 MAP3K12Q12852 859 aa13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 NSUN4Q96CB9 384 aaKnown RBP13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 EAF2Q96CJ1 260 aaPredicted RBP13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 CSRNP1Q96S65 589 aa13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 AOX1Q06278 1338 aa13.36□□□□□ -0.27
SNRNP25-204ENST00000417493 APBB1O00213 710 aa13.35□□□□□ -0.27
SNRNP25-204ENST00000417493 TCP10Q12799 353 aa13.35□□□□□ -0.27
SNRNP25-204ENST00000417493 C20orf194Q5TEA3 1177 aa13.35□□□□□ -0.27
SNRNP25-204ENST00000417493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNRNP25-204ENST00000417493 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
SNRNP25-204ENST00000417493 WNK4Q96J92 1243 aa13.35□□□□□ -0.27
SNRNP25-204ENST00000417493 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
SNRNP25-204ENST00000417493 ZBTB47Q9UFB7 747 aaPredicted RBP13.35□□□□□ -0.27
SNRNP25-204ENST00000417493 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.35□□□□□ -0.27
SNRNP25-204ENST00000417493 TRPA1O75762 1119 aa13.34□□□□□ -0.27
SNRNP25-204ENST00000417493 RGS3P49796 1198 aa13.34□□□□□ -0.27
SNRNP25-204ENST00000417493 COL13A1Q5TAT6 717 aaPredicted RBP13.34□□□□□ -0.27
SNRNP25-204ENST00000417493 TBC1D9Q6ZT07 1266 aa13.34□□□□□ -0.27
SNRNP25-204ENST00000417493 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.271e-9■■■■■ 42.5
SNRNP25-204ENST00000417493 WRNIP1Q96S55 665 aa13.34□□□□□ -0.27
SNRNP25-204ENST00000417493 SNRKQ9NRH2 765 aa13.34□□□□□ -0.27
SNRNP25-204ENST00000417493 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
SNRNP25-204ENST00000417493 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 CYP2E1P05181 493 aaPredicted RBP13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 ZAP70P43403 619 aa13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 GTF2A2P52657 109 aa13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 PI16Q6UXB8 463 aa13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 ERO1BQ86YB8 467 aa13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 SIRT2Q8IXJ6 389 aa13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 ELP3Q9H9T3 547 aa13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 FOCADQ5VW36 1801 aa13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 COL2A1P02458 1487 aaPredicted RBP13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 MYH7P12883 1935 aa13.33□□□□□ -0.28
SNRNP25-204ENST00000417493 CDK5RAP2Q96SN8 1893 aa13.32□□□□□ -0.28
SNRNP25-204ENST00000417493 NFIAQ12857 509 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms