RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 TACC3Q9Y6A5 838 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 MYH2Q9UKX2 1941 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 PRPF40AO75400 957 aaKnown RBP12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 ZSCAN22P10073 491 aaPredicted RBP12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 NPR1P16066 1061 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 PDE6BP35913 854 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 FOSBP53539 338 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 SF3B2Q13435 895 aaKnown RBP12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 ALX1Q15699 326 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 RIOK1Q9BRS2 568 aaKnown RBP12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 CYP2D7A0A087X1C5 515 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 PDIA3P30101 505 aaKnown RBP12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 TPRNQ4KMQ1 711 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 GDPD2Q9HCC8 539 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 CD209Q9NNX6 404 aa12.59□□□□□ -0.39
SMPD4P1-201ENST00000416717 KLF18A0A0U1RQI7 1052 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 DIXDC1Q155Q3 683 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 BRPF3Q9ULD4 1205 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 LRRC37AA6NMS7 1700 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 PFKFB2O60825 505 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 KDM4AO75164 1064 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 NCLP19338 710 aaKnown RBP12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 PDS5AQ29RF7 1337 aaKnown RBP12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 FERMT3Q86UX7 667 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 C2CD5Q86YS7 1000 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 WDR66Q8TBY9 1149 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 FBXW7Q969H0 707 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 MTMR6Q9Y217 621 aa12.58□□□□□ -0.4
SMPD4P1-201ENST00000416717 MAST2Q6P0Q8 1798 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 CHRNA5P30532 468 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 EVX2Q03828 476 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 AKNAD1Q5T1N1 836 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 SPTY2D1Q68D10 685 aaPredicted RBP12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 MFSD6Q6ZSS7 791 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 MASTLQ96GX5 879 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 ZKSCAN3Q9BRR0 538 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 SENP2Q9HC62 589 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 ZMYM6O95789 1325 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 GOLGA8BA8MQT2 603 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 F13A1P00488 732 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 RXRAP19793 462 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 ALDH1B1P30837 517 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 BAG6P46379 1132 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 PPARAQ07869 468 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 MPNDQ8N594 471 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 DDX49Q9Y6V7 483 aaKnown RBP12.57□□□□□ -0.4
SMPD4P1-201ENST00000416717 LTBP1Q14766 1721 aa12.56□□□□□ -0.4
SMPD4P1-201ENST00000416717 SLX4Q8IY92 1834 aa12.56□□□□□ -0.4
SMPD4P1-201ENST00000416717 CTDNEP1O95476 244 aa12.56□□□□□ -0.4
SMPD4P1-201ENST00000416717 DPP8Q6V1X1 898 aaPredicted RBP12.56□□□□□ -0.4
SMPD4P1-201ENST00000416717 C15orf52Q6ZUT6 534 aaKnown RBP12.56□□□□□ -0.4
SMPD4P1-201ENST00000416717 ZNF274Q96GC6 653 aaPredicted RBP12.56□□□□□ -0.4
SMPD4P1-201ENST00000416717 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
SMPD4P1-201ENST00000416717 PTPDC1A2A3K4 754 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 DOK7Q18PE1 504 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 CCDC144CPQ8IYA2 1237 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 FAM184AQ8NB25 1140 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 NSUN7Q8NE18 718 aaKnown RBP12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 USP17L12C9JPN9 530 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 USP17L21D6R901 530 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 H0YIN7 160 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 PRDM1O75626 825 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 IL1R1P14778 569 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 GTF2IP78347 998 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 MFSD14BQ5SR56 506 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 NFXL1Q6ZNB6 911 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 CRNKL1Q9BZJ0 848 aaKnown RBP12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 ZC3H12CQ9C0D7 883 aaKnown RBP12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 TMX4Q9H1E5 349 aaPredicted RBP12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 ANGEL1Q9UNK9 670 aaKnown RBP12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 CNPY2Q9Y2B0 182 aa12.55□□□□□ -0.4
SMPD4P1-201ENST00000416717 TIAM2Q8IVF5 1701 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 SH2B2O14492 632 aaPredicted RBP12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 IFIT3O14879 490 aaKnown RBP12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 CYP2D6P10635 497 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 PDCP20941 246 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 FAM173BQ6P4H8 233 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 STAG1Q8WVM7 1258 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 MYL10Q9BUA6 226 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 HPS5Q9UPZ3 1129 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 SALL1Q9NSC2 1324 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 G3V3G9 751 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 PTMSP20962 102 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 CTR9Q6PD62 1173 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 MICU3Q86XE3 530 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 KRT23Q9C075 422 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms