RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 OTUD7AQ8TE49 926 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-209ENST00000415920 GPATCH3Q96I76 525 aa16.64■□□□□ 0.25
CPNE1-209ENST00000415920 PRMT6Q96LA8 375 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-209ENST00000415920 COL1A1P02452 1464 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-209ENST00000415920 IL1R1P14778 569 aa16.63■□□□□ 0.25
CPNE1-209ENST00000415920 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
CPNE1-209ENST00000415920 TTC39AQ5SRH9 613 aa16.63■□□□□ 0.25
CPNE1-209ENST00000415920 C15orf52Q6ZUT6 534 aaKnown RBP16.63■□□□□ 0.25
CPNE1-209ENST00000415920 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 IGF2BP3O00425 579 aaKnown RBP eCLIP16.62■□□□□ 0.252e-7■■■■□ 20.3
CPNE1-209ENST00000415920 FKTNO75072 461 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 MX1P20591 662 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 GJA5P36382 358 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 PHKA1P46020 1223 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 PKN2Q16513 984 aaKnown RBP16.62■□□□□ 0.25
CPNE1-209ENST00000415920 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
CPNE1-209ENST00000415920 NBPF12Q5TAG4 269 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-209ENST00000415920 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 FBXO46Q6PJ61 603 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-209ENST00000415920 CDAN1Q8IWY9 1227 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 MTMR14Q8NCE2 650 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 CFHR5Q9BXR6 569 aa16.62■□□□□ 0.25
CPNE1-209ENST00000415920 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-209ENST00000415920 MYH2Q9UKX2 1941 aa16.61■□□□□ 0.25
CPNE1-209ENST00000415920 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
CPNE1-209ENST00000415920 MMP14P50281 582 aa16.61■□□□□ 0.25
CPNE1-209ENST00000415920 BCAMP50895 628 aa16.61■□□□□ 0.25
CPNE1-209ENST00000415920 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
CPNE1-209ENST00000415920 CCDC158Q5M9N0 1113 aa16.61■□□□□ 0.25
CPNE1-209ENST00000415920 SKAP1Q86WV1 359 aa16.61■□□□□ 0.25
CPNE1-209ENST00000415920 IFNL1Q8IU54 200 aa16.61■□□□□ 0.25
CPNE1-209ENST00000415920 VEZTQ9HBM0 779 aa16.61■□□□□ 0.25
CPNE1-209ENST00000415920 FRAT2O75474 233 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-209ENST00000415920 PDE4AP27815 886 aa16.6■□□□□ 0.25
CPNE1-209ENST00000415920 CAP1Q01518 475 aa16.6■□□□□ 0.25
CPNE1-209ENST00000415920 SLC10A4Q96EP9 437 aa16.6■□□□□ 0.25
CPNE1-209ENST00000415920 FAM84BQ96KN1 310 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-209ENST00000415920 RGS3P49796 1198 aa16.59■□□□□ 0.25
CPNE1-209ENST00000415920 PRPF38BQ5VTL8 546 aaKnown RBP16.59■□□□□ 0.25
CPNE1-209ENST00000415920 ECHDC1Q9NTX5 307 aa16.59■□□□□ 0.25
CPNE1-209ENST00000415920 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
CPNE1-209ENST00000415920 SALL3Q9BXA9 1300 aa16.59■□□□□ 0.25
CPNE1-209ENST00000415920 MANSC4A6NHS7 340 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-209ENST00000415920 USP2O75604 605 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-209ENST00000415920 UQCRFS1P1P0C7P4 283 aa16.58■□□□□ 0.24
CPNE1-209ENST00000415920 ARID4AP29374 1257 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-209ENST00000415920 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-209ENST00000415920 RASA3Q14644 834 aa16.58■□□□□ 0.24
CPNE1-209ENST00000415920 GRIK5Q16478 980 aa16.58■□□□□ 0.24
CPNE1-209ENST00000415920 PPP2R3BQ9Y5P8 575 aa16.58■□□□□ 0.24
CPNE1-209ENST00000415920 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.24
CPNE1-209ENST00000415920 HTTP42858 3142 aa16.58■□□□□ 0.24
CPNE1-209ENST00000415920 ZBTB48P10074 688 aaPredicted RBP16.57■□□□□ 0.24
CPNE1-209ENST00000415920 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
CPNE1-209ENST00000415920 FKBP1AP62942 108 aaKnown RBP16.57■□□□□ 0.24
CPNE1-209ENST00000415920 RASGRF1Q13972 1273 aa16.57■□□□□ 0.24
CPNE1-209ENST00000415920 PI16Q6UXB8 463 aa16.57■□□□□ 0.24
CPNE1-209ENST00000415920 OTOP1Q7RTM1 612 aa16.57■□□□□ 0.24
CPNE1-209ENST00000415920 FBXO33Q7Z6M2 555 aa16.57■□□□□ 0.24
CPNE1-209ENST00000415920 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
CPNE1-209ENST00000415920 PTPN18Q99952 460 aa16.57■□□□□ 0.24
CPNE1-209ENST00000415920 TRIM17Q9Y577 477 aa16.57■□□□□ 0.24
CPNE1-209ENST00000415920 FAM205AQ6ZU69 1335 aa16.56■□□□□ 0.24
CPNE1-209ENST00000415920 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
CPNE1-209ENST00000415920 ERC2O15083 957 aa16.56■□□□□ 0.24
CPNE1-209ENST00000415920 PPP1R12BO60237 982 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-209ENST00000415920 MCAMP43121 646 aa16.56■□□□□ 0.24
CPNE1-209ENST00000415920 PDE1AP54750 535 aa16.56■□□□□ 0.24
CPNE1-209ENST00000415920 CRHR2Q13324 411 aa16.56■□□□□ 0.24
CPNE1-209ENST00000415920 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
CPNE1-209ENST00000415920 TDRD7Q8NHU6 1098 aaKnown RBP16.56■□□□□ 0.24
CPNE1-209ENST00000415920 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
CPNE1-209ENST00000415920 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
CPNE1-209ENST00000415920 SEMA3EO15041 775 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 MYO1BO43795 1136 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 ALDH1A1P00352 501 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 SPDYE2Q495Y8 402 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 MFSD14BQ5SR56 506 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 CD99L2Q8TCZ2 262 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 TEPSINQ96N21 525 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
CPNE1-209ENST00000415920 ELP3Q9H9T3 547 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 SNRKQ9NRH2 765 aa16.55■□□□□ 0.24
CPNE1-209ENST00000415920 ZNF70Q9UC06 446 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-209ENST00000415920 TTF2Q9UNY4 1162 aaKnown RBP16.55■□□□□ 0.24
CPNE1-209ENST00000415920 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
CPNE1-209ENST00000415920 GLRX3O76003 335 aaKnown RBP16.54■□□□□ 0.24
CPNE1-209ENST00000415920 SUPT20HL1Q3ZLR7 823 aa16.54■□□□□ 0.24
CPNE1-209ENST00000415920 SPATA5Q8NB90 893 aa16.54■□□□□ 0.24
CPNE1-209ENST00000415920 PI4K2BQ8TCG2 481 aa16.54■□□□□ 0.24
CPNE1-209ENST00000415920 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
CPNE1-209ENST00000415920 DENND2AQ9ULE3 1009 aa16.54■□□□□ 0.24
CPNE1-209ENST00000415920 ATP5JP18859 108 aa16.53■□□□□ 0.24
CPNE1-209ENST00000415920 IREB2P48200 963 aaKnown RBP16.53■□□□□ 0.24
CPNE1-209ENST00000415920 INHBEP58166 350 aa16.53■□□□□ 0.24
CPNE1-209ENST00000415920 ZNF512BQ96KM6 892 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms