RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-208	ENST00000415548	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.31	□□□□□ -0.76
CCT3-208	ENST00000415548	CHMP4B	Q9H444	224 aa	Known RBP	10.31	□□□□□ -0.76
CCT3-208	ENST00000415548	TMOD2	Q9NZR1	351 aa		10.31	□□□□□ -0.76
CCT3-208	ENST00000415548	DBNL	Q9UJU6	430 aa	Known RBP	10.31	□□□□□ -0.76
CCT3-208	ENST00000415548	ANGEL1	Q9UNK9	670 aa	Known RBP	10.31	□□□□□ -0.76
CCT3-208	ENST00000415548	MYH2	Q9UKX2	1941 aa		10.31	□□□□□ -0.76
CCT3-208	ENST00000415548	APBB1	O00213	710 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	HMMR	O75330	724 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	TNNI2	P48788	182 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	CTCF	P49711	727 aa	Predicted RBP	10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	CCDC158	Q5M9N0	1113 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	LDLRAD1	Q5T700	205 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	CDC42EP5	Q6NZY7	148 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	ERC1	Q8IUD2	1116 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	BEGAIN	Q9BUH8	593 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	IL1RAPL2	Q9NP60	686 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	SNRK	Q9NRH2	765 aa		10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.3	□□□□□ -0.76
CCT3-208	ENST00000415548	AKAP11	Q9UKA4	1901 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	PPP1R12B	O60237	982 aa	Predicted RBP	10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	USP2	O75604	605 aa	Predicted RBP	10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	HSPA8	P11142	646 aa	Known RBP	10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	RRP1	P56182	461 aa	Known RBP	10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	MECOM	Q03112	1051 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	MKRN3	Q13064	507 aa	Known RBP	10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	MAP3K11	Q16584	847 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	HSP90AB4P	Q58FF6	505 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	FKBP1C	Q5VVH2	108 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	ERICH6	Q7L0X2	663 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	AACS	Q86V21	672 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	RHPN1	Q8TCX5	695 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	ZNF384	Q8TF68	577 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	CLMN	Q96JQ2	1002 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	FOXD4L1	Q9NU39	408 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	USP40	Q9NVE5	1235 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	RAI14	Q9P0K7	980 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	TSKS	Q9UJT2	592 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	GAK	O14976	1311 aa		10.29	□□□□□ -0.76
CCT3-208	ENST00000415548	IREB2	P48200	963 aa	Known RBP	10.28	□□□□□ -0.76
CCT3-208	ENST00000415548	LBX1	P52954	281 aa		10.28	□□□□□ -0.76
CCT3-208	ENST00000415548	NFIA	Q12857	509 aa		10.28	□□□□□ -0.76
CCT3-208	ENST00000415548	FAM83A	Q86UY5	434 aa		10.28	□□□□□ -0.76
CCT3-208	ENST00000415548	NSUN4	Q96CB9	384 aa	Known RBP	10.28	□□□□□ -0.76
CCT3-208	ENST00000415548	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.28	□□□□□ -0.76
CCT3-208	ENST00000415548	CSRNP1	Q96S65	589 aa		10.28	□□□□□ -0.76
CCT3-208	ENST00000415548	BCL11A	Q9H165	835 aa		10.28	□□□□□ -0.76
CCT3-208	ENST00000415548	MROH7-TTC4	A0A0A0MT08	1334 aa		10.28	□□□□□ -0.76
CCT3-208	ENST00000415548	OTOF	Q9HC10	1997 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	CYP2E1	P05181	493 aa	Predicted RBP	10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	BTD	P43251	543 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	ZAP70	P43403	619 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	TCP10	Q12799	353 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	SLF2	Q8IX21	1173 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	FAM151A	Q8WW52	585 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	KIF1BP	Q96EK5	621 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	SLC10A4	Q96EP9	437 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	FAM163A	Q96GL9	167 aa	Predicted RBP	10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	PRDM10	Q9NQV6	1147 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	LRP2BP	Q9P2M1	347 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	FAM198A	Q9UFP1	575 aa		10.27	□□□□□ -0.77
CCT3-208	ENST00000415548	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	GPR75-ASB3	A0A0A6YYF3	556 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	CA12	O43570	354 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	RAB11FIP3	O75154	756 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	LDHC	P07864	332 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	RGS3	P49796	1198 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	GSTO1	P78417	241 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	SPRYD7	Q5W111	196 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	ZFPM1	Q8IX07	1006 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	ANKRD13A	Q8IZ07	590 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	CLASRP	Q8N2M8	674 aa	Known RBP	10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	PIH1D3	Q9NQM4	214 aa	Known RBP	10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	NDUFB9	Q9Y6M9	179 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	AK9	Q5TCS8	1911 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	RFX7	Q2KHR2	1363 aa		10.26	□□□□□ -0.77
CCT3-208	ENST00000415548	MAST2	Q6P0Q8	1798 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	UNCX	A6NJT0	531 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	WDHD1	O75717	1129 aa	Predicted RBP	10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	IFIT2	P09913	472 aa	Known RBP	10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	RHBDL3	P58872	404 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	MAP3K9	P80192	1104 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	MIGA2	Q7L4E1	593 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	REM2	Q8IYK8	340 aa	Predicted RBP	10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	WNK4	Q96J92	1243 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	CRBN	Q96SW2	442 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	IDI2	Q9BXS1	227 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	ELP3	Q9H9T3	547 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	RNF186	Q9NXI6	227 aa		10.25	□□□□□ -0.77
CCT3-208	ENST00000415548	SMARCA5	O60264	1052 aa	Predicted RBP	10.24	□□□□□ -0.77
CCT3-208	ENST00000415548	ENTPD3	O75355	529 aa		10.24	□□□□□ -0.77
CCT3-208	ENST00000415548	TRPA1	O75762	1119 aa		10.24	□□□□□ -0.77
CCT3-208	ENST00000415548	GJA5	P36382	358 aa		10.24	□□□□□ -0.77
CCT3-208	ENST00000415548	PICALM	Q13492	652 aa		10.24	□□□□□ -0.77
CCT3-208	ENST00000415548	VGLL4	Q14135	290 aa		10.24	□□□□□ -0.77
CCT3-208	ENST00000415548	NAA16	Q6N069	864 aa	Predicted RBP	10.24	□□□□□ -0.77

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