RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 CACNB3P54284 484 aa30.86■■■□□ 2.53
CPNE1-207ENST00000414664 CYP4F22Q6NT55 531 aa30.86■■■□□ 2.53
CPNE1-207ENST00000414664 RGMBQ6NW40 437 aa30.86■■■□□ 2.53
CPNE1-207ENST00000414664 PPP1R12BO60237 982 aaPredicted RBP30.85■■■□□ 2.53
CPNE1-207ENST00000414664 SMARCA5O60264 1052 aaPredicted RBP30.85■■■□□ 2.53
CPNE1-207ENST00000414664 EXOC6Q8TAG9 804 aa30.85■■■□□ 2.53
CPNE1-207ENST00000414664 GRM1Q13255 1194 aa30.84■■■□□ 2.53
CPNE1-207ENST00000414664 HDAC1Q13547 482 aaPredicted RBP30.84■■■□□ 2.53
CPNE1-207ENST00000414664 NBPF12Q5TAG4 269 aaPredicted RBP30.84■■■□□ 2.53
CPNE1-207ENST00000414664 GPR75-ASB3A0A0A6YYF3 556 aa30.83■■■□□ 2.53
CPNE1-207ENST00000414664 BTDP43251 543 aa30.83■■■□□ 2.53
CPNE1-207ENST00000414664 TTF1Q15361 905 aaPredicted RBP30.83■■■□□ 2.53
CPNE1-207ENST00000414664 NAA16Q6N069 864 aaPredicted RBP30.83■■■□□ 2.53
CPNE1-207ENST00000414664 CCDC102AQ96A19 550 aa30.83■■■□□ 2.53
CPNE1-207ENST00000414664 TMEM39BQ9GZU3 492 aa30.83■■■□□ 2.53
CPNE1-207ENST00000414664 MAP4K4O95819 1239 aaPredicted RBP30.82■■■□□ 2.52
CPNE1-207ENST00000414664 ZNF157P51786 506 aaPredicted RBP30.82■■■□□ 2.52
CPNE1-207ENST00000414664 PRKG1Q13976 671 aa30.82■■■□□ 2.52
CPNE1-207ENST00000414664 ZNF384Q8TF68 577 aa30.82■■■□□ 2.52
CPNE1-207ENST00000414664 NOL10Q9BSC4 688 aaKnown RBP30.82■■■□□ 2.52
CPNE1-207ENST00000414664 PIH1D3Q9NQM4 214 aaKnown RBP30.82■■■□□ 2.52
CPNE1-207ENST00000414664 UBE2Q2LH0YL09 131 aa30.81■■■□□ 2.52
CPNE1-207ENST00000414664 MOB2Q70IA6 237 aa30.81■■■□□ 2.52
CPNE1-207ENST00000414664 FAM151AQ8WW52 585 aa30.81■■■□□ 2.52
CPNE1-207ENST00000414664 GCC1Q96CN9 775 aa30.81■■■□□ 2.52
CPNE1-207ENST00000414664 HOOK2Q96ED9 719 aa30.81■■■□□ 2.52
CPNE1-207ENST00000414664 TEPSINQ96N21 525 aa30.81■■■□□ 2.52
CPNE1-207ENST00000414664 ZBTB47Q9UFB7 747 aaPredicted RBP30.81■■■□□ 2.52
CPNE1-207ENST00000414664 ANGEL1Q9UNK9 670 aaKnown RBP30.81■■■□□ 2.52
CPNE1-207ENST00000414664 ATP5JP18859 108 aa30.8■■■□□ 2.52
CPNE1-207ENST00000414664 TMED8Q6PL24 325 aaPredicted RBP30.8■■■□□ 2.52
CPNE1-207ENST00000414664 GPATCH3Q96I76 525 aa30.8■■■□□ 2.52
CPNE1-207ENST00000414664 RWDD1Q9H446 243 aaPredicted RBP30.8■■■□□ 2.52
CPNE1-207ENST00000414664 IDH1O75874 414 aaKnown RBP30.79■■■□□ 2.52
CPNE1-207ENST00000414664 MAP2K2P36507 400 aa30.79■■■□□ 2.52
CPNE1-207ENST00000414664 MAP3K12Q12852 859 aa30.79■■■□□ 2.52
CPNE1-207ENST00000414664 MAP3K11Q16584 847 aa30.79■■■□□ 2.52
CPNE1-207ENST00000414664 IDI2Q9BXS1 227 aa30.79■■■□□ 2.52
CPNE1-207ENST00000414664 NDUFB9Q9Y6M9 179 aa30.79■■■□□ 2.52
CPNE1-207ENST00000414664 BAG3O95817 575 aa30.78■■■□□ 2.52
CPNE1-207ENST00000414664 IREB2P48200 963 aaKnown RBP30.78■■■□□ 2.52
CPNE1-207ENST00000414664 NOGQ13253 232 aa30.78■■■□□ 2.52
CPNE1-207ENST00000414664 RPAP1Q9BWH6 1393 aaPredicted RBP30.78■■■□□ 2.52
CPNE1-207ENST00000414664 MAST2Q6P0Q8 1798 aa30.77■■■□□ 2.52
CPNE1-207ENST00000414664 SSC5DA1L4H1 1573 aa30.77■■■□□ 2.52
CPNE1-207ENST00000414664 UNCXA6NJT0 531 aa30.77■■■□□ 2.52
CPNE1-207ENST00000414664 NFIAQ12857 509 aa30.77■■■□□ 2.52
CPNE1-207ENST00000414664 DNAJC2Q99543 621 aaKnown RBP30.77■■■□□ 2.52
CPNE1-207ENST00000414664 BOLA2Q9H3K6 86 aa30.77■■■□□ 2.52
CPNE1-207ENST00000414664 ANTXR1Q9H6X2 564 aa30.77■■■□□ 2.52
CPNE1-207ENST00000414664 ECHDC1Q9NTX5 307 aa30.77■■■□□ 2.52
CPNE1-207ENST00000414664 ENTPD3O75355 529 aa30.76■■■□□ 2.51
CPNE1-207ENST00000414664 PLCG2P16885 1265 aa30.76■■■□□ 2.51
CPNE1-207ENST00000414664 TCP10Q12799 353 aa30.76■■■□□ 2.51
CPNE1-207ENST00000414664 LDLRAD1Q5T700 205 aa30.76■■■□□ 2.51
CPNE1-207ENST00000414664 FAM198AQ9UFP1 575 aa30.76■■■□□ 2.51
CPNE1-207ENST00000414664 MAP2K1Q02750 393 aaPredicted RBP30.75■■■□□ 2.51
CPNE1-207ENST00000414664 GOLIM4O00461 696 aa30.74■■■□□ 2.51
CPNE1-207ENST00000414664 USP2O75604 605 aaPredicted RBP30.74■■■□□ 2.51
CPNE1-207ENST00000414664 SLC10A3P09131 477 aa30.74■■■□□ 2.51
CPNE1-207ENST00000414664 CYP7A1P22680 504 aa30.74■■■□□ 2.51
CPNE1-207ENST00000414664 RGS3P49796 1198 aa30.74■■■□□ 2.51
CPNE1-207ENST00000414664 RHBDL3P58872 404 aa30.74■■■□□ 2.51
CPNE1-207ENST00000414664 CDAN1Q8IWY9 1227 aa30.74■■■□□ 2.51
CPNE1-207ENST00000414664 HAUS7Q99871 368 aa30.74■■■□□ 2.51
CPNE1-207ENST00000414664 FAM155AB1AL88 458 aaPredicted RBP30.73■■■□□ 2.51
CPNE1-207ENST00000414664 AOC2O75106 756 aa30.73■■■□□ 2.51
CPNE1-207ENST00000414664 PPP4CP60510 307 aa30.73■■■□□ 2.51
CPNE1-207ENST00000414664 ANKRD45Q5TZF3 282 aa30.73■■■□□ 2.51
CPNE1-207ENST00000414664 DCAF15Q66K64 600 aa30.73■■■□□ 2.51
CPNE1-207ENST00000414664 MAGEB6Q8N7X4 407 aa30.73■■■□□ 2.51
CPNE1-207ENST00000414664 PAG1Q9NWQ8 432 aa30.73■■■□□ 2.51
CPNE1-207ENST00000414664 FZD1Q9UP38 647 aa30.73■■■□□ 2.51
CPNE1-207ENST00000414664 MYO5AQ9Y4I1 1855 aaKnown RBP30.73■■■□□ 2.51
CPNE1-207ENST00000414664 NPM3O75607 178 aaKnown RBP30.72■■■□□ 2.51
CPNE1-207ENST00000414664 WDHD1O75717 1129 aaPredicted RBP30.72■■■□□ 2.51
CPNE1-207ENST00000414664 CERS3Q8IU89 383 aa30.72■■■□□ 2.51
CPNE1-207ENST00000414664 AATFQ9NY61 560 aaKnown RBP eCLIP30.72■■■□□ 2.51
CPNE1-207ENST00000414664 RASAL3Q86YV0 1011 aa30.71■■■□□ 2.51
CPNE1-207ENST00000414664 TEX11Q8IYF3 940 aa30.71■■■□□ 2.51
CPNE1-207ENST00000414664 ANKRD13AQ8IZ07 590 aa30.71■■■□□ 2.51
CPNE1-207ENST00000414664 SLC10A4Q96EP9 437 aa30.71■■■□□ 2.51
CPNE1-207ENST00000414664 DOCK2Q92608 1830 aa30.7■■■□□ 2.51
CPNE1-207ENST00000414664 RFX7Q2KHR2 1363 aa30.7■■■□□ 2.51
CPNE1-207ENST00000414664 THSD7BQ9C0I4 1608 aa30.7■■■□□ 2.51
CPNE1-207ENST00000414664 IRX6P78412 446 aaPredicted RBP30.7■■■□□ 2.51
CPNE1-207ENST00000414664 PICALMQ13492 652 aa30.7■■■□□ 2.51
CPNE1-207ENST00000414664 ADGRA1Q86SQ6 560 aa30.7■■■□□ 2.51
CPNE1-207ENST00000414664 ZSCAN29Q8IWY8 852 aaPredicted RBP30.7■■■□□ 2.51
CPNE1-207ENST00000414664 HSPA1AP0DMV8 641 aaKnown RBP30.69■■■□□ 2.5
CPNE1-207ENST00000414664 HSPA1BP0DMV9 641 aaKnown RBP30.69■■■□□ 2.5
CPNE1-207ENST00000414664 AIDAQ96BJ3 306 aa30.69■■■□□ 2.5
CPNE1-207ENST00000414664 TTC41PQ6P2S7 1318 aa30.69■■■□□ 2.5
CPNE1-207ENST00000414664 AK9Q5TCS8 1911 aa30.69■■■□□ 2.5
CPNE1-207ENST00000414664 SLC9C2Q5TAH2 1124 aa30.68■■■□□ 2.5
CPNE1-207ENST00000414664 ZFPM1Q8IX07 1006 aa30.68■■■□□ 2.5
CPNE1-207ENST00000414664 REM2Q8IYK8 340 aaPredicted RBP30.68■■■□□ 2.5
CPNE1-207ENST00000414664 SH3RF3Q8TEJ3 882 aaPredicted RBP30.68■■■□□ 2.5
CPNE1-207ENST00000414664 BEGAINQ9BUH8 593 aa30.68■■■□□ 2.5
CPNE1-207ENST00000414664 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.68■■■□□ 2.53e-7■■■■□ 26
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms