RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 FAM205AQ6ZU69 1335 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 PDHXO00330 501 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 PDE8AO60658 829 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 VAMP4O75379 141 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CAPN2P17655 700 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 B4GALNT3Q6L9W6 998 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ERO1BQ86YB8 467 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ZKSCAN4Q969J2 545 aaPredicted RBP11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CCDC136Q96JN2 1154 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 NBPF3Q9H094 633 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 SEMA6BQ9H3T3 888 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CHPF2Q9P2E5 772 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 SNCAIPQ9Y6H5 919 aa11.98□□□□□ -0.49
SOX9-AS1-201ENST00000412640 MS4A1P11836 297 aa11.97□□□□□ -0.49
SOX9-AS1-201ENST00000412640 TRIM28Q13263 835 aaKnown RBP11.97□□□□□ -0.49
SOX9-AS1-201ENST00000412640 SSH1Q8WYL5 1049 aa11.97□□□□□ -0.49
SOX9-AS1-201ENST00000412640 TMEM39BQ9GZU3 492 aa11.97□□□□□ -0.49
SOX9-AS1-201ENST00000412640 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.97□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ZNF70Q9UC06 446 aaPredicted RBP11.97□□□□□ -0.49
SOX9-AS1-201ENST00000412640 COL2A1P02458 1487 aaPredicted RBP11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 KIF16BQ96L93 1317 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 TCP10L2B9ZVM9 353 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ANKRD23Q86SG2 305 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ANKLE1Q8NAG6 615 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 PXYLP1Q8TE99 480 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CDC5LQ99459 802 aaKnown RBP11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 C11orf49Q9H6J7 331 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CD209Q9NNX6 404 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 BSDC1Q9NW68 430 aaPredicted RBP11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 JAG2Q9Y219 1238 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 LAS1LQ9Y4W2 734 aaKnown RBP11.96□□□□□ -0.49
SOX9-AS1-201ENST00000412640 BCRP11274 1271 aa11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 HSP90B1P14625 803 aaKnown RBP11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 FOSL2P15408 326 aa11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 PPIL2Q13356 520 aa11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 TNFAIP1Q13829 316 aa11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 TWISTNBQ3B726 338 aaPredicted RBP11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 ZKSCAN2Q63HK3 967 aa11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 C8orf58Q8NAV2 365 aa11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 ARHGAP45Q92619 1136 aa11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 SMC4Q9NTJ3 1288 aa11.95□□□□□ -0.5
SOX9-AS1-201ENST00000412640 MGAMO43451 1857 aa11.94□□□□□ -0.5
SOX9-AS1-201ENST00000412640 IPO8O15397 1037 aaKnown RBP11.94□□□□□ -0.5
SOX9-AS1-201ENST00000412640 CYP2C8P10632 490 aa11.94□□□□□ -0.5
SOX9-AS1-201ENST00000412640 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
SOX9-AS1-201ENST00000412640 TSPYL6Q8N831 410 aa11.94□□□□□ -0.5
SOX9-AS1-201ENST00000412640 USP38Q8NB14 1042 aa11.94□□□□□ -0.5
SOX9-AS1-201ENST00000412640 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
SOX9-AS1-201ENST00000412640 TTYH1Q9H313 450 aaPredicted RBP11.94□□□□□ -0.5
SOX9-AS1-201ENST00000412640 SPEF2Q9C093 1822 aa11.94□□□□□ -0.5
SOX9-AS1-201ENST00000412640 PFASO15067 1338 aa11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 SNAP23O00161 211 aa11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 PCCAP05165 728 aaPredicted RBP11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 IRF5Q13568 498 aa11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 ATF7IPQ6VMQ6 1270 aa11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 MRPL50Q8N5N7 158 aaKnown RBP11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 FRAT1Q92837 279 aaPredicted RBP11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 SNX27Q96L92 541 aa11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 DDX60LQ5H9U9 1706 aaKnown RBP11.93□□□□□ -0.5
SOX9-AS1-201ENST00000412640 TNPO2O14787 897 aaKnown RBP11.92□□□□□ -0.5
SOX9-AS1-201ENST00000412640 TRIM27P14373 513 aa11.92□□□□□ -0.5
SOX9-AS1-201ENST00000412640 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
SOX9-AS1-201ENST00000412640 DZIP1LQ8IYY4 767 aaKnown RBP11.92□□□□□ -0.5
SOX9-AS1-201ENST00000412640 PANK1Q8TE04 598 aa11.92□□□□□ -0.5
SOX9-AS1-201ENST00000412640 GREM2Q9H772 168 aa11.92□□□□□ -0.5
SOX9-AS1-201ENST00000412640 RLBP1P12271 317 aa11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 KCNJ4P48050 445 aa11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 CTSWP56202 376 aa11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 PPATQ06203 517 aa11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 TRIM32Q13049 653 aa11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 MOGSQ13724 837 aa11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 LRRC26Q2I0M4 334 aa11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 TTLL11Q8NHH1 800 aa11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 PARK7Q99497 189 aaKnown RBP11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 MYD88Q99836 296 aa11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 LBHD1Q9BQE6 289 aaPredicted RBP11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 NOB1Q9ULX3 412 aaKnown RBP11.91□□□□□ -0.5
SOX9-AS1-201ENST00000412640 TNNI2P48788 182 aa11.9□□□□□ -0.5
SOX9-AS1-201ENST00000412640 MVPQ14764 893 aaKnown RBP11.9□□□□□ -0.5
SOX9-AS1-201ENST00000412640 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
SOX9-AS1-201ENST00000412640 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.5
SOX9-AS1-201ENST00000412640 COG6Q9Y2V7 657 aa11.9□□□□□ -0.5
SOX9-AS1-201ENST00000412640 CDH23Q9H251 3354 aa11.9□□□□□ -0.51
SOX9-AS1-201ENST00000412640 INPP5BP32019 993 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CACNB3P54284 484 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 SHHQ15465 462 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 GPAT2Q6NUI2 795 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ALYREFQ86V81 257 aaKnown RBP11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CCDC191Q8NCU4 936 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ADAMTS19Q8TE59 1207 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ANKRD2Q9GZV1 360 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CWC25Q9NXE8 425 aaPredicted RBP11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 DBF4Q9UBU7 674 aaPredicted RBP11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 OGDHLQ9ULD0 1010 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms