RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 IWS1Q96ST2 819 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 TYW1Q9NV66 732 aaKnown RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 F8W8V4 182 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 P4HA1P13674 534 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 TMPOP42166 694 aaKnown RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 UBXN1Q04323 297 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 VSIG1Q86XK7 387 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 UBLCP1Q8WVY7 318 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 MYCBPQ99417 103 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 HAUS7Q99871 368 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 RTEL1Q9NZ71 1219 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 A0A1B0GW55 424 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 ZEB2O60315 1214 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 BCAR3O75815 825 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 DUX4L2P0CJ85 424 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 DUX4L3P0CJ86 424 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 DUX4L4P0CJ87 422 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 DUX4L5P0CJ88 424 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 DUX4L6P0CJ89 424 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 DUX4L7P0CJ90 424 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 NMIQ13287 307 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-203ENST00000412145 TAF12Q16514 161 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 KIFC3Q9BVG8 833 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 DUX4Q9UBX2 424 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 BRD3Q15059 726 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 IFIT1BQ5T764 474 aaKnown RBP8.23□□□□□ -1.09
PTPN3-203ENST00000412145 HHATQ5VTY9 493 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 PDXDC1Q6P996 788 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 TMTC1Q8IUR5 882 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 KRT2P35908 639 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 CFAP221Q4G0U5 840 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 ANO6Q4KMQ2 910 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 FBXO31Q5XUX0 539 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-203ENST00000412145 NUDT16Q96DE0 195 aaKnown RBP8.23□□□□□ -1.09
PTPN3-203ENST00000412145 TOM1O60784 492 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 GFAPP14136 432 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 PPP2R5DQ14738 602 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 SRRM1Q8IYB3 904 aaKnown RBP8.23□□□□□ -1.09
PTPN3-203ENST00000412145 TBC1D32Q96NH3 1257 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 LZTS2Q9BRK4 669 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 SERPINA10Q9UK55 444 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 TSPY3P0CV98 308 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 TSPY8P0CW00 308 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 CCDC152Q4G0S7 254 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 TTC22Q5TAA0 569 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-203ENST00000412145 KLHL14Q9P2G3 628 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 AGTPBP1Q9UPW5 1226 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 AMOTL2Q9Y2J4 779 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 NSD3Q9BZ95 1437 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 RNF8O76064 485 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 CHMP4BP1P59074 171 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 TMEM57Q8N5G2 664 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 IPO11Q9UI26 975 aaKnown RBP8.23□□□□□ -1.09
PTPN3-203ENST00000412145 SPTLC2O15270 562 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 ZBTB24O43167 697 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-203ENST00000412145 ESRRGP62508 458 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 ZKSCAN3Q9BRR0 538 aa8.23□□□□□ -1.09
PTPN3-203ENST00000412145 H0YCG3 227 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 ABCD1P33897 745 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 ST5P78524 1137 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 PPP2R3AQ06190 1150 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 LLPHQ9BRT6 129 aaKnown RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 ZC4H2Q9NQZ6 224 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 ATP2C2O75185 946 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 SLC12A2P55011 1212 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 DENND2CQ68D51 928 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 VTI1AQ96AJ9 217 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 CABS1Q96KC9 395 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 E9PMD0 336 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 MUM1Q2TAK8 710 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 SLC17A8Q8NDX2 589 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 BAG1Q99933 345 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 EFHD1Q9BUP0 239 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 BCRP11274 1271 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 ATP6V1AP38606 617 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 MYL5Q02045 173 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 PLCB4Q15147 1175 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 CCDC122Q5T0U0 273 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 RUFY3Q7L099 469 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 HACE1Q8IYU2 909 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 ARHGEF2Q92974 986 aaKnown RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 SPATS2LQ9NUQ6 558 aaKnown RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 GOLGA8KD6RF30 607 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 IBSPP21815 317 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 COG7P83436 770 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 RRS1Q15050 365 aaKnown RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 LEO1Q8WVC0 666 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 CSRNP1Q96S65 589 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 TIAM1Q13009 1591 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 PALM3A6NDB9 673 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 PAWRQ96IZ0 340 aaKnown RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 PSMD1Q99460 953 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 SLC26A6Q9BXS9 759 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 ANKRD36BQ8N2N9 1353 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 KPNA2P52292 529 aaKnown RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 GFM2Q969S9 779 aaKnown RBP8.22□□□□□ -1.09
PTPN3-203ENST00000412145 KIF2CQ99661 725 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 PRDM10Q9NQV6 1147 aa8.22□□□□□ -1.09
PTPN3-203ENST00000412145 KIF14Q15058 1648 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms