RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 USP44Q9H0E7 712 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 JADE2Q9NQC1 790 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 GCOM1H8Y6P7 765 aaPredicted RBP10.28□□□□□ -0.76
PBRM1-208ENST00000410007 KCNQ3O43525 872 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 PRDM1O75626 825 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 MYZAPP0CAP1 466 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 RPL13P26373 211 aaKnown RBP10.28□□□□□ -0.76
PBRM1-208ENST00000410007 PRPHP41219 470 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 CCDC65Q8IXS2 484 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 SNX14Q9Y5W7 946 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 LOC102724428A0A0B4J2F2 783 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 SIK1P57059 783 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 TYRO3Q06418 890 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 DLGAP5Q15398 846 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 DSCC1Q9BVC3 393 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 CCDC113Q9H0I3 377 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
PBRM1-208ENST00000410007 ELP1O95163 1332 aa10.27□□□□□ -0.76
PBRM1-208ENST00000410007 CPA1P15085 419 aa10.27□□□□□ -0.76
PBRM1-208ENST00000410007 SLC1A4P43007 532 aa10.27□□□□□ -0.76
PBRM1-208ENST00000410007 SV2BQ7L1I2 683 aa10.27□□□□□ -0.76
PBRM1-208ENST00000410007 V9GY48 417 aaPredicted RBP10.27□□□□□ -0.76
PBRM1-208ENST00000410007 GOLGA6L10A0A0M3HER8 536 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 PPIP5K2O43314 1243 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 ATP2B4P23634 1241 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 NLGN1Q8N2Q7 840 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 TTC12Q9H892 705 aaPredicted RBP10.27□□□□□ -0.77
PBRM1-208ENST00000410007 ERVK-7P63135 1459 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 SPATA31E1Q6ZUB1 1445 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 DKC1O60832 514 aaKnown RBP eCLIP10.27□□□□□ -0.77
PBRM1-208ENST00000410007 SPECC1Q5M775 1068 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 HAUS3Q68CZ6 603 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 TTLL7Q6ZT98 887 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 APBB1IPQ7Z5R6 666 aaPredicted RBP10.27□□□□□ -0.77
PBRM1-208ENST00000410007 MAP3K15Q6ZN16 1313 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 IGSF1Q8N6C5 1336 aa10.27□□□□□ -0.77
PBRM1-208ENST00000410007 VWA3AA6NCI4 1184 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 KIF4AO95239 1232 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 ZNF174Q15697 407 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 FMNL3Q8IVF7 1028 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 ARPP21Q9UBL0 812 aaPredicted RBP10.26□□□□□ -0.77
PBRM1-208ENST00000410007 STK24Q9Y6E0 443 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 HSP90AA4PQ58FG1 418 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 USP6P35125 1406 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 WDR17Q8IZU2 1322 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 ROBO2Q9HCK4 1378 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 CKAP4Q07065 602 aaKnown RBP10.26□□□□□ -0.77
PBRM1-208ENST00000410007 TNFAIP1Q13829 316 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 KIAA0753Q2KHM9 967 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 BRDTQ58F21 947 aaPredicted RBP10.26□□□□□ -0.77
PBRM1-208ENST00000410007 BEND3Q5T5X7 828 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 FCHSD1Q86WN1 690 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 TEKT1Q969V4 418 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 MRVI1Q9Y6F6 885 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 SKILP12757 684 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 IL6STP40189 918 aaPredicted RBP10.26□□□□□ -0.77
PBRM1-208ENST00000410007 KRT83P78385 493 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 FAM160A1Q05DH4 1040 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 MFSD14BQ5SR56 506 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 KRT25Q7Z3Z0 450 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 MAPKAPK5Q8IW41 473 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 ZBTB21Q9ULJ3 1066 aa10.26□□□□□ -0.77
PBRM1-208ENST00000410007 DIS3L2Q8IYB7 885 aaKnown RBP10.25□□□□□ -0.77
PBRM1-208ENST00000410007 NEK11Q8NG66 645 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 DDX12PQ92771 950 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 CNKSR1Q969H4 720 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 QTRT2Q9H974 415 aaKnown RBP10.25□□□□□ -0.77
PBRM1-208ENST00000410007 HECW2Q9P2P5 1572 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 IVNS1ABPQ9Y6Y0 642 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 ZBED4O75132 1171 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 TUBB4AP04350 444 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 ANO1Q5XXA6 986 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 LMBR1Q8WVP7 490 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 TM6SF1Q9BZW5 370 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 TMX1Q9H3N1 280 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 CGNQ9P2M7 1197 aaKnown RBP10.25□□□□□ -0.77
PBRM1-208ENST00000410007 H7C1D1 291 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 TACC1O75410 805 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 CCT6AP40227 531 aaKnown RBP10.25□□□□□ -0.77
PBRM1-208ENST00000410007 GTF2IP78347 998 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 SP4Q02446 784 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 AKNAD1Q5T1N1 836 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 TGFBRAP1Q8WUH2 860 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 NONOQ15233 471 aaKnown RBP eCLIP10.25□□□□□ -0.77
PBRM1-208ENST00000410007 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 PIK3AP1Q6ZUJ8 805 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 CCDC186Q7Z3E2 898 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 MSANTD4Q8NCY6 345 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 SELENOOQ9BVL4 669 aa10.25□□□□□ -0.77
PBRM1-208ENST00000410007 ADCY7P51828 1080 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 CEP135Q66GS9 1140 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 CCDC42Q96M95 316 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 TTF2Q9UNY4 1162 aaKnown RBP10.24□□□□□ -0.77
PBRM1-208ENST00000410007 TTC37Q6PGP7 1564 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 SEC24BO95487 1268 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 STX17P56962 302 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 TFAP4Q01664 338 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 CTDSPL2Q05D32 466 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 ANKARQ7Z5J8 1434 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms